GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001291-TA|BGIBMGA001291-PA|IPR000917|Sulfatase
         (508 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   1.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   6.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   8.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   8.8  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 296 LIGILLSYVDMQKTIIVLTSDHGWSLG 322
           L  +LL Y D+ K   V T   G+ LG
Sbjct: 587 LEAVLLRYPDLNKIFYVQTDSSGYGLG 613


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 469 ELYDHIIDPIESKNLFLVSKYKNIAKVLS 497
           EL   I+D +   +LFLV + + +A++L+
Sbjct: 180 ELNRVILDNMSRNHLFLVRRTETLAQILN 208


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 361 DIFPTLVDLTKLSDEIPKCLNHK 383
           D+   L++LTK+   +P C + K
Sbjct: 13  DVIKPLINLTKIFGFLPVCSSQK 35


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 126 GKSSNFTDDYPYSWSEYPYHPP 147
           G+S  FT +  +   E PY PP
Sbjct: 120 GESPGFTTERNWEIREKPYTPP 141


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.139    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,076
Number of Sequences: 317
Number of extensions: 6303
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 4
length of query: 508
length of database: 114,650
effective HSP length: 60
effective length of query: 448
effective length of database: 95,630
effective search space: 42842240
effective search space used: 42842240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)