GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001291-TA|BGIBMGA001291-PA|IPR000917|Sulfatase
         (508 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domai...    60   3e-09
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    57   3e-08
U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domai...    53   6e-07
U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    44   2e-04
AC024790-10|AAF60632.2|  129|Caenorhabditis elegans Hypothetical...    30   4.4  
Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>U37548-1|AAA79198.2|  488|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform a protein.
          Length = 488

 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 24/237 (10%)

Query: 7   IILLNGDRVLTSDVETPK---NILFILIDDLRHLS----DKKVYLPNINFLG--KTGATF 57
           ++LL+   +   D +T     N+LFI+ DDL        D  ++ PN+  L   K  A  
Sbjct: 11  LLLLHNHGITGVDGQTATQKPNVLFIMADDLGFSDVDWKDSTLHTPNLRHLAFHKNTALL 70

Query: 58  NNAFAQQALCAPSRNSLLTGRRPDSLRLYDFYSYWRDRSNGQGNFTTIPQFFKEHGYDTY 117
           +N++  Q LC P+R++ +TG  P  +   +      + +     F  + +  ++  Y TY
Sbjct: 71  SNSYVNQ-LCTPTRSAFMTGYYPFRVGTQNGVFLHMEPAGVPTMFPFLSENMRQLDYSTY 129

Query: 118 SVGKVFHPG--KSSNFTDDYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNLICPVSV 175
            VGK +H G  K      +  + +    Y P T  +  +    +++ K++ + L     V
Sbjct: 130 LVGK-WHLGYCKKEFLPTNRGFDYFYGFYGPQTGYFNHSADQYHRELKRVVKGLDLFEEV 188

Query: 176 KRQPGQSLPDLQS---------LDYAIDFLKKRNGSKPFFLAIGFHKPHIPLKFPKE 223
               G+S+PD             D A+  L   N SKPFF+ + +   H PL+  ++
Sbjct: 189 GS--GKSVPDFSQNGVYSTDLFTDVAMSVLDNHNNSKPFFMFLSYQAVHPPLQVSQQ 243


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 56.8 bits (131), Expect = 3e-08
 Identities = 81/358 (22%), Positives = 146/358 (40%), Gaps = 33/358 (9%)

Query: 20  VETPKNILFILIDDLRHLSDKKVYLPNINFLGKT-GATFNNAFAQQALCAPSRNSLLTGR 78
           V++  N++ IL DD         ++P  + + K  G  F + +    +C PSR+++LTG 
Sbjct: 31  VDSQHNVILILTDDQDIELGSMDFMPKTSQIMKERGTEFTSGYVTTPICCPSRSTILTGL 90

Query: 79  RPDSLRLYDFYSY-----WRDRSNGQGNFTTIPQFFKEHGYDTYSVGKVFHPGKSSNFTD 133
              +  ++          WR     +    +I  + +E GY T  +GK  +    S    
Sbjct: 91  YVHNHHVHTNNQNCTGVEWRKVHEKK----SIGVYLQEAGYRTAYLGKYLNEYDGSYI-- 144

Query: 134 DYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNLICPVSVKRQPGQSLPDLQSLDYAI 193
             P  W E+  H    + K++K          ER        ++     L   +SL +  
Sbjct: 145 --PPGWDEW--HA---IVKNSKFYNYTMNSNGEREKFGS-EYEKDYFTDLVTNRSLKFID 196

Query: 194 DFLKKRNGSKPFFLAIGFHKPHIPLKFPKEYLKQMPISKVHRPKEPNIPKDMPLVSWHPW 253
             +K R   +PF L I +  PH P     ++         HR    N   + P   W   
Sbjct: 197 KHIKIR-AWQPFALIISYPAPHGPEDPAPQFAHMFENEISHRTGSWNFAPN-PDKQWL-- 252

Query: 254 TDVRKRDDIRRLNITFPFGVMPTKWTLKIRQSYYAAALYIDELIGILLSYVDMQKTIIVL 313
             +++   +  ++I+F    +  +  L+  QS       I+ L  +L     +  T  + 
Sbjct: 253 --LQRTGKMNDVHISFTD--LLHRRRLQTLQSVDEG---IERLFNLLRELNQLWNTYAIY 305

Query: 314 TSDHGWSLGENGLW-AKYSNFDYALKVPLIFKSPKLIPTVV-HEPVELIDIFPTLVDL 369
           TSDHG+ LG+ GL   K   +++ ++VP   + P +   V  +E V  +DI PT++ +
Sbjct: 306 TSDHGYHLGQFGLLKGKNMPYEFDIRVPFFMRGPGIPRNVTFNEIVTNVDIAPTMLHI 363


>U37548-2|ABK57090.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein3, isoform b protein.
          Length = 452

 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 17/198 (8%)

Query: 39  DKKVYLPNINFLG--KTGATFNNAFAQQALCAPSRNSLLTGRRPDSLRLYDFYSYWRDRS 96
           D  ++ PN+  L   K  A  +N++  Q LC P+R++ +TG  P  +   +      + +
Sbjct: 14  DSTLHTPNLRHLAFHKNTALLSNSYVNQ-LCTPTRSAFMTGYYPFRVGTQNGVFLHMEPA 72

Query: 97  NGQGNFTTIPQFFKEHGYDTYSVGKVFHPG--KSSNFTDDYPYSWSEYPYHPPTEMYKDA 154
                F  + +  ++  Y TY VGK +H G  K      +  + +    Y P T  +  +
Sbjct: 73  GVPTMFPFLSENMRQLDYSTYLVGK-WHLGYCKKEFLPTNRGFDYFYGFYGPQTGYFNHS 131

Query: 155 KVCRNKKTKKLERNLICPVSVKRQPGQSLPDLQS---------LDYAIDFLKKRNGSKPF 205
               +++ K++ + L     V    G+S+PD             D A+  L   N SKPF
Sbjct: 132 ADQYHRELKRVVKGLDLFEEVGS--GKSVPDFSQNGVYSTDLFTDVAMSVLDNHNNSKPF 189

Query: 206 FLAIGFHKPHIPLKFPKE 223
           F+ + +   H PL+  ++
Sbjct: 190 FMFLSYQAVHPPLQVSQQ 207


>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 25  NILFILIDDLRHLSDKKVYLPN-----INFLGKTGATFNNAFAQQALCAPSRNSLLTGRR 79
           NI+ ++IDDL +        P      ++ +   G  F  A++  ++C+PSR   +TGR 
Sbjct: 34  NIVILMIDDLGYGDIASYGHPTQEYTQVDRMAAEGTRFTQAYSADSMCSPSRAGFITGRL 93

Query: 80  PDSLRLYD----FYSYWRDRSNGQGNFTTIPQFFKEHGYDTYSVGKVFHPGKSSNFTDD 134
           P  L +      F  Y  D      + TT+ +  +E GY T  VGK +H G + N   D
Sbjct: 94  PIRLGIVGGRRVFVPY--DIGGLPKSETTMAEMLQEAGYATGMVGK-WHLGINENNATD 149


>AC024790-10|AAF60632.2|  129|Caenorhabditis elegans Hypothetical
           protein Y47D7A.11 protein.
          Length = 129

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 128 SSNFTDDYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNLICPVSVKRQPGQ 181
           SS+F+D+   S SEY    P   Y+     R    +K +R  + P+   +Q  Q
Sbjct: 76  SSSFSDNEVASDSEYTTASPNSEYRKRAKARTAHNRKFQRRALTPIRRFQQKKQ 129


>Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical
           protein C33D9.3b protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 131 FTDDYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNLICPVSVKRQPGQSLP 184
           FT  +   + + P+   T  Y   K+C+++       +   P S K  PG+S P
Sbjct: 243 FTTPFICEFCQMPFQKETTCYIHQKLCKSRFVNVSTTDTPIPKSSKSSPGKSTP 296


>Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical
           protein C33D9.3a protein.
          Length = 354

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 131 FTDDYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNLICPVSVKRQPGQSLP 184
           FT  +   + + P+   T  Y   K+C+++       +   P S K  PG+S P
Sbjct: 246 FTTPFICEFCQMPFQKETTCYIHQKLCKSRFVNVSTTDTPIPKSSKSSPGKSTP 299


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.321    0.139    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,796,838
Number of Sequences: 27539
Number of extensions: 639474
Number of successful extensions: 1327
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 8
length of query: 508
length of database: 12,573,161
effective HSP length: 84
effective length of query: 424
effective length of database: 10,259,885
effective search space: 4350191240
effective search space used: 4350191240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)