GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001291-TA|BGIBMGA001291-PA|IPR000917|Sulfatase
         (508 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g66800.1 68418.m08422 expressed protein                             36   0.048
At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR...    32   0.78 
At4g20220.1 68417.m02955 hypothetical protein                          32   1.0  
At2g06140.1 68415.m00675 hypothetical protein                          31   2.4  
At5g57670.1 68418.m07207 protein kinase family protein contains ...    29   5.5  
At2g20725.1 68415.m02435 CAAX amino terminal protease family pro...    29   5.5  
At5g10870.1 68418.m01262 chorismate mutase, cytosolic (CM2) iden...    29   9.6  

>At5g66800.1 68418.m08422 expressed protein
          Length = 183

 Score = 36.3 bits (80), Expect = 0.048
 Identities = 15/44 (34%), Positives = 27/44 (61%)

Query: 126 GKSSNFTDDYPYSWSEYPYHPPTEMYKDAKVCRNKKTKKLERNL 169
           G SS+F+D++ +S S Y   P  E++   K+   K+T +++R L
Sbjct: 48  GSSSSFSDNFEFSVSNYTMMPADELFSKGKLLPFKETNQVQRTL 91


>At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1031

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 2   IYVVNIILLNGDRVLTSDVETPKNILFILIDDLRHLSDKKVYLPNINFLGKTGATFNNAF 61
           ++++ I+ L+G R L S  E P ++ F++ DD   L  + V+ P +N   K    F N F
Sbjct: 781 LHLLYILNLSGCRRLASLPELPSSLRFLMADDCESL--ETVFCP-LN-TPKAELNFTNCF 836

Query: 62  --AQQALCAPSRNSLLTG 77
              QQA  A  + SLL G
Sbjct: 837 KLGQQAQRAIVQRSLLLG 854


>At4g20220.1 68417.m02955 hypothetical protein 
          Length = 158

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 30  LIDDLRHLSDKKVYLPNINFLGKTGATFNNAFAQQALCAPSRN 72
           +I +LR+L  ++VYLP IN+  KT    +  F  + L   SRN
Sbjct: 110 IIVNLRNLISERVYLPEINWKFKTEPHTSTNFRTKCLPCDSRN 152


>At2g06140.1 68415.m00675 hypothetical protein 
          Length = 633

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 249 SWHPWTDVRKRD---DIRRLNITFPFGVMPTKWTLKIRQSYYAAALYIDELIGILLSYVD 305
           S HP+   R  D   D   L       V P  +T +  +SY AA L  D++IG++ ++VD
Sbjct: 6   SSHPYEVARHEDFGYDQGYLQEVISVDVHPNNYTYQTNESYQAAELE-DKIIGLIRNFVD 64


>At5g57670.1 68418.m07207 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 416

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 212 HKPHIPLKFPKEYLKQMPISKVHRPKEPNIPKDMPLVSWHPWTDVRK-RDDIRRLNI 267
           HK   P KF    +   P+ K    +  N PK  PL+    + ++ K  +D  + NI
Sbjct: 53  HKSISPYKFISSLIMNSPLRKWRGSETKNKPKPQPLIQCFTYNEISKATNDFHQGNI 109


>At2g20725.1 68415.m02435 CAAX amino terminal protease family
           protein contains Pfam profile PF02517 CAAX amino
           terminal protease family protein
          Length = 301

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 312 VLTSDHGWSLGENGLWAKYSNFDYALKVPLIFKSPKLIPTVVHEPV 357
           VL S+  W   ++ +W+ ++ + ++L +PL F    ++  ++H  V
Sbjct: 68  VLASEIPWE--DDNIWSTFALYMFSLHIPLSFGGLSIVANILHRQV 111


>At5g10870.1 68418.m01262 chorismate mutase, cytosolic (CM2)
           identical to gi:5732016
          Length = 265

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 12/164 (7%)

Query: 90  SYWRDRSNGQGNFTTIPQFF-KEHGYDTYSVGKVFHPGKSSNFTDDYPYSWSEYPYHP-P 147
           ++   R    G+F+++ +FF +E       VG+  +P ++  F ++ P+  S +P H  P
Sbjct: 49  AFEESRCLDSGSFSSLTEFFVRETEIIQAKVGRYEYPEENPFFLENIPH--SVFPTHKYP 106

Query: 148 TEMY-KDAKVCRNKKTKKLERNLICPVSVKRQPGQSLPDLQSLDYA-IDFLKKRNGSKPF 205
           + ++ K   V  NK+   +    + P+ VK     + P   + D A +  L +R     F
Sbjct: 107 SALHPKALSVNINKQIWDIYFKELLPLFVKPGDDGNYPSTAASDLACLQALSRRIHYGKF 166

Query: 206 FLAIGF------HKPHIPLKFPKEYLKQMPISKVHRPKEPNIPK 243
              + F      ++P I  +  +  +K +   KV    +  + K
Sbjct: 167 VAEVKFRDAPQDYEPAIRAQDREALMKLLTFEKVEEMVKKRVQK 210


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.321    0.139    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,108,991
Number of Sequences: 28952
Number of extensions: 604020
Number of successful extensions: 1158
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 8
length of query: 508
length of database: 12,070,560
effective HSP length: 84
effective length of query: 424
effective length of database: 9,638,592
effective search space: 4086763008
effective search space used: 4086763008
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)