BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001288-TA|BGIBMGA001288-PA|undefined
(303 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane... 61 1e-09
Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical p... 54 2e-07
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z79756-7|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 45 6e-05
AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane... 42 7e-04
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 41 0.001
Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z81533-8|CAB04331.1| 723|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z93381-5|CAB07608.1| 716|Caenorhabditis elegans Hypothetical pr... 39 0.005
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 36 0.027
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z32681-3|CAD88217.1| 685|Caenorhabditis elegans Hypothetical
protein F56F3.2b protein.
Length = 685
Score = 60.9 bits (141), Expect = 1e-09
Identities = 63/253 (24%), Positives = 98/253 (38%), Gaps = 28/253 (11%)
Query: 10 SLLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXX 69
S++ G+C PS+CS DL S L + KV C +N +SF
Sbjct: 177 SIILGVCFPSACSVADLTTVSSIYLPY---NLKVE---CESQN---RWSFVTVLLLIILM 227
Query: 70 XXXXXXXXGTILDDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGINAL 129
T D + L+ FS+ N ++ F + + V G+ L
Sbjct: 228 VWIVPQAVATFQTSSNDSI------LSCFSIPDNAKRTFSTRRESPNLHVV---HGLEFL 278
Query: 130 ALLVAHKSMAMAHN-PYVNKVSFS--EVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLL 186
M PY+ V+F+ V P ++ + D L LS F Y L
Sbjct: 279 LFFTIVSGMVYNFMLPYIENVAFAFEGVSSFPMHIVNNYSY-QIDGLLALSAFYTTYLLF 337
Query: 187 QE-LERKGTIDLKSRLINRWFRLFPLFVSLMLFCTYILPDISNGPQWNLVVEEHSRVCEK 245
L + D ++ R FR +P ++ +LF I P +S+GP W + + C
Sbjct: 338 GNILTLRSAFDY---ILMRLFRFWPAYIVCVLFMYVIFPGVSSGPMW--IHTDTVNRCGS 392
Query: 246 NMWKSFLFIHNYF 258
WK+ LFI+N+F
Sbjct: 393 GWWKNILFINNWF 405
>Z32681-2|CAA83607.1| 687|Caenorhabditis elegans Hypothetical
protein F56F3.2a protein.
Length = 687
Score = 60.9 bits (141), Expect = 1e-09
Identities = 63/253 (24%), Positives = 98/253 (38%), Gaps = 28/253 (11%)
Query: 10 SLLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXX 69
S++ G+C PS+CS DL S L + KV C +N +SF
Sbjct: 177 SIILGVCFPSACSVADLTTVSSIYLPY---NLKVE---CESQN---RWSFVTVLLLIILM 227
Query: 70 XXXXXXXXGTILDDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGINAL 129
T D + L+ FS+ N ++ F + + V G+ L
Sbjct: 228 VWIVPQAVATFQTSSNDSI------LSCFSIPDNAKRTFSTRRESPNLHVV---HGLEFL 278
Query: 130 ALLVAHKSMAMAHN-PYVNKVSFS--EVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLL 186
M PY+ V+F+ V P ++ + D L LS F Y L
Sbjct: 279 LFFTIVSGMVYNFMLPYIENVAFAFEGVSSFPMHIVNNYSY-QIDGLLALSAFYTTYLLF 337
Query: 187 QE-LERKGTIDLKSRLINRWFRLFPLFVSLMLFCTYILPDISNGPQWNLVVEEHSRVCEK 245
L + D ++ R FR +P ++ +LF I P +S+GP W + + C
Sbjct: 338 GNILTLRSAFDY---ILMRLFRFWPAYIVCVLFMYVIFPGVSSGPMW--IHTDTVNRCGS 392
Query: 246 NMWKSFLFIHNYF 258
WK+ LFI+N+F
Sbjct: 393 GWWKNILFINNWF 405
>AF173373-1|AAD51973.1| 687|Caenorhabditis elegans transmembrane
protein NDG-4 protein.
Length = 687
Score = 60.9 bits (141), Expect = 1e-09
Identities = 63/253 (24%), Positives = 98/253 (38%), Gaps = 28/253 (11%)
Query: 10 SLLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXX 69
S++ G+C PS+CS DL S L + KV C +N +SF
Sbjct: 177 SIILGVCFPSACSVADLTTVSSIYLPY---NLKVE---CESQN---RWSFVTVLLLIILM 227
Query: 70 XXXXXXXXGTILDDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGINAL 129
T D + L+ FS+ N ++ F + + V G+ L
Sbjct: 228 VWIVPQAVATFQTSSNDSI------LSCFSIPDNAKRTFSTRRESPNLHVV---HGLEFL 278
Query: 130 ALLVAHKSMAMAHN-PYVNKVSFS--EVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLL 186
M PY+ V+F+ V P ++ + D L LS F Y L
Sbjct: 279 LFFTIVSGMVYNFMLPYIENVAFAFEGVSSFPMHIVNNYSY-QIDGLLALSAFYTTYLLF 337
Query: 187 QE-LERKGTIDLKSRLINRWFRLFPLFVSLMLFCTYILPDISNGPQWNLVVEEHSRVCEK 245
L + D ++ R FR +P ++ +LF I P +S+GP W + + C
Sbjct: 338 GNILTLRSAFDY---ILMRLFRFWPAYIVCVLFMYVIFPGVSSGPMW--IHTDTVNRCGS 392
Query: 246 NMWKSFLFIHNYF 258
WK+ LFI+N+F
Sbjct: 393 GWWKNILFINNWF 405
>Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 53.6 bits (123), Expect = 2e-07
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 8 YSSLLW--GICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXX 65
+SSL + +C+P SC DL + L +L TA+ C +++++ +F
Sbjct: 72 FSSLPYRSAVCMPRSCQHLDLPK-LYNQLGSKLFTARF--AKCVHQDIEKDSAFWGFTIF 128
Query: 66 XXXXXXXXXXXXG------TILDDDKDGVTN-FEKLLNAFSLKRNLRKVFDLSDAATR-V 117
T + D TN + K L AFS N ++ + + +
Sbjct: 129 MGIMISIAILATSVDYLRETTYNIPSDKETNLYLKFLLAFSFWTNAGQILSVKEQKPGFI 188
Query: 118 KGVDAFRGINALALLVAHKSMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLS 177
K +D R + ++ H + N + + S V + W + +A + D+F +S
Sbjct: 189 KSLDCIRAFSISWVIAGHSLLFFEFNETL--IPISNVPKLIWNHLFLNATVSVDTFFLMS 246
Query: 178 GFLNAYNLLQELERKGTIDLKSRL------INRWFRLFPLFVSLMLFCTYILPDISNGP- 230
G + AY ++ + TI KS L ++R+ RL P ++ + F P I GP
Sbjct: 247 GIVVAYLFFKQRPKSSTI--KSPLTWILFYLHRYLRLTPPYMIFVGFFVVYGPYI-QGPY 303
Query: 231 ---QWNLVVEEHSRVCEKNMWKSFLFIHNY 257
WN + S C N W++ ++I+N+
Sbjct: 304 AAWMWN-ALASMSNYCRTNWWRNLIYINNF 332
>Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 53.6 bits (123), Expect = 2e-07
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 29/270 (10%)
Query: 8 YSSLLW--GICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXX 65
+SSL + +C+P SC DL + L +L TA+ C +++++ +F
Sbjct: 72 FSSLPYRSAVCMPRSCQHLDLPK-LYNQLGSKLFTARF--AKCVHQDIEKDSAFWGFTIF 128
Query: 66 XXXXXXXXXXXXG------TILDDDKDGVTN-FEKLLNAFSLKRNLRKVFDLSDAATR-V 117
T + D TN + K L AFS N ++ + + +
Sbjct: 129 MGIMISIAILATSVDYLRETTYNIPSDKETNLYLKFLLAFSFWTNAGQILSVKEQKPGFI 188
Query: 118 KGVDAFRGINALALLVAHKSMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLS 177
K +D R + ++ H + N + + S V + W + +A + D+F +S
Sbjct: 189 KSLDCIRAFSISWVIAGHSLLFFEFNETL--IPISNVPKLIWNHLFLNATVSVDTFFLMS 246
Query: 178 GFLNAYNLLQELERKGTIDLKSRL------INRWFRLFPLFVSLMLFCTYILPDISNGP- 230
G + AY ++ + TI KS L ++R+ RL P ++ + F P I GP
Sbjct: 247 GIVVAYLFFKQRPKSSTI--KSPLTWILFYLHRYLRLTPPYMIFVGFFVVYGPYI-QGPY 303
Query: 231 ---QWNLVVEEHSRVCEKNMWKSFLFIHNY 257
WN + S C N W++ ++I+N+
Sbjct: 304 AAWMWN-ALASMSNYCRTNWWRNLIYINNF 332
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 94 LLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGINALALLVAHKSMAMAH-NPYVNKVSFS 152
+L+AFS++ +L +F ++ VK V+ FR ++ ++ +H + H + V+
Sbjct: 309 ILSAFSVRSSLTYLF--RNSTRDVKLVNLFRVCSSFWVIFSHTCLFSLHFTDTIRSVARK 366
Query: 153 EVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLLQELERKGT------IDLKSRLINRWF 206
+ W ++ L D+FL+LS + +Y++ +++ +G+ I + L +R
Sbjct: 367 GESVVGWRNFMMNSSLAVDTFLFLSACVASYSIRKKILFRGSSSNFSIIKCLALLGHRCL 426
Query: 207 RLFPLFVSLMLFCTYILPDISNGPQWNLVVEEHSRVCEKNMWKSFLFIHNYF 258
RL P +LF + +++GP WN + +W F F+ N+F
Sbjct: 427 RLLPALSLYLLFMGLVYNHLADGPFWNANGMFGTECNVTTIWPHFAFVSNFF 478
>Z79756-7|CAB02117.3| 693|Caenorhabditis elegans Hypothetical
protein F53C11.2 protein.
Length = 693
Score = 48.8 bits (111), Expect = 5e-06
Identities = 63/276 (22%), Positives = 112/276 (40%), Gaps = 28/276 (10%)
Query: 3 HRVPRYSSLLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKX 62
H PR++ +C+PSSCS DL E + +S T + + +K V++ ++F
Sbjct: 146 HVTPRFA-----VCMPSSCSESDLVEIFNQIISFPLTTCQAFKS--GIK-VEKKWAFWAF 197
Query: 63 XXXXXXXXXXXXXXXGTILDDDKD----GVTNFEKLLNAF---SLKRNLRKVFDLSDAAT 115
+K+ V +L +F SL N + + +
Sbjct: 198 SVFMALIVSLVVSATFVDYFREKEIGMSAVNEHAYVLRSFLSFSLWSNAELILSVKEHKP 257
Query: 116 R-VKGVDAFRGINALALLVAHK-SMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSF 173
++ +D R + L ++ AH + +N + F E + ++ S D+
Sbjct: 258 HHIRSLDCIRALTILWIVFAHTYNFKFPYNNVGSSTDFIENLSISRQLVLNS-YFSIDTL 316
Query: 174 LYLSGFLNAYNLLQELERKGTIDLKSRLI----NRWFRLFPLFVSLMLFCTYILPDISNG 229
LSG AY + GTI I +R+ R P ++ + F T I G
Sbjct: 317 FVLSGITEAYIFFWNKPKYGTILKPWTWIYYYAHRYLRSAPALMTFIGFFT-IYEKFIQG 375
Query: 230 P----QWNLVVEEHSRVCEKNMWKSFLFIHNYFGFE 261
P + N++ +E + +CE N WK+ L+I+N+ G E
Sbjct: 376 PFMASEMNVLTKE-AEICESNWWKNALYINNFAGDE 410
>Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical
protein C06B3.2 protein.
Length = 665
Score = 46.8 bits (106), Expect = 2e-05
Identities = 56/262 (21%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 15 ICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXX------XXXX 68
+C+P SC+S D + L +LS L +TA T C+ ++V + +F
Sbjct: 160 VCMPKSCASSDTVD-LYNQLSALPLTACA--TFCSQRDVPKDSAFWGFSAFMFVIVSTVI 216
Query: 69 XXXXXXXXXGTILDDDKDGV---TNFEKLLNAFSLKRNLRKVFDLSDA-ATRVKGVDAFR 124
++ D + + +LL +FS N + ++S AT +K +D R
Sbjct: 217 LATTVDYLRESVYDISSKSIEKSASLYRLLYSFSFWTNASTILNVSSQPATHIKCLDCIR 276
Query: 125 GINALALLVAHKSMAMAHNPYVNKV-SFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAY 183
G++ +L H A + + SF+ F + + +A+ D+F +SG AY
Sbjct: 277 GLSMAWVLSGHMLNYFAFADTLMPIKSFANYFADYFFM---NAVFSVDTFFLVSGITVAY 333
Query: 184 NLLQELERKGTIDLKSRLI----NRWFRLFPLFVSLM----LFCTYILPDISNGPQWNLV 235
+ + T+ + I +R+ RL P ++ + ++ YI ++ +N
Sbjct: 334 SFFRLKPTTKTLKSPATWILFYVHRYVRLTPPYIIFIGFYAVYALYIQGPLA-ASLFNFT 392
Query: 236 VEEHSRVCEKNMWKSFLFIHNY 257
V + C+ + W++ ++I+N+
Sbjct: 393 VLQ-VEACKASWWRNLIYINNF 413
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 45.2 bits (102), Expect = 6e-05
Identities = 60/266 (22%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 10 SLLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXX 69
+L +C+P SCS D+ + +LS TA + C V++ F
Sbjct: 126 TLRMAVCLPDSCSHQDM-INIFNQLSPYPFTA--CDAYCVKNTVEKDVPF--WGFTVFLT 180
Query: 70 XXXXXXXXGTILDDDKD---GVTN------FEKLLNAFSLKRNLRKVFDLSDAATR-VKG 119
T+LD +D G++N F K++ FSL N + + + +K
Sbjct: 181 IVIAVAIFATLLDYVQDAVLGLSNLKEKNIFIKIILTFSLWTNAELILSVKEHKPGFIKS 240
Query: 120 VDAFRGINALALLVAHKSMAMAHNPYVNKV-SFSEVFGMPWAVIGRSAILYTDSFLYLSG 178
+D RG++ ++ H + M + V F F W + +A + DSF LSG
Sbjct: 241 LDCIRGLSIFWVITGHSFIYMTQADTMKPVMEFQNQF---WNHLIINAPVSVDSFFALSG 297
Query: 179 FLNAY---NLLQELERKGT-IDLKSRLINRWFRLFPLFVSLMLFCTYILPDISNGP---Q 231
+ AY + ++ + + ++R+ RL P + + F T P + GP
Sbjct: 298 IVVAYLFFKMKPNIKMAASPVTWILFYVHRYLRLTPTVMIFIGFFTVYFPYV-QGPFAAS 356
Query: 232 WNLVVEEHSRVCEKNMWKSFLFIHNY 257
++ V C+ W + L+I+N+
Sbjct: 357 FSNVQFPQVEACKDYWWHNLLYINNF 382
>AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical
protein Y39H10A.2 protein.
Length = 740
Score = 43.6 bits (98), Expect = 2e-04
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 93 KLLNAFSLKRNLRKVFDLSDA--ATRVKGVDAFRGINALALLVAHKS---MAMAHNPYVN 147
KL +AFS RNL+++F+ + +V ++ R I+ ++ H S + NP ++
Sbjct: 273 KLFSAFSFHRNLKEIFNTKNCHKEGQVTSLNCIRVISTFWVIFGHCSEITFMVITNP-ID 331
Query: 148 KVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLLQELERKGTIDLKSR-----LI 202
F++ + +A D+F ++S FL ++ ++LE++ L +
Sbjct: 332 LYDFTK--DTYTGTLISNAYFSVDTFFFISAFLLSFLWFKQLEKQWNALLSPGGWLMFYV 389
Query: 203 NRWFRLFPLFVSLMLFCTYILPDISNGPQWNLVVEEHSRVCEKNMWKSFLFIHNYFG 259
+R RL P++ +LF T++ + C+ + W + L+I N G
Sbjct: 390 HRIARLSPVYYVTILFFTFVFTRSMVDMPAFMTPAVVDDTCQNSYWVNLLYIQNIVG 446
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 42.7 bits (96), Expect = 3e-04
Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 23/265 (8%)
Query: 15 ICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSF-GKXXXXXXXXXXXX 73
+C+P SC+ ++ + + +LS TA + C+ VK+ F G
Sbjct: 151 VCLPDSCNQHEIIDIFN-QLSPYPFTAC--HAYCSEYEVKKDTPFWGFSIFLIVMVVIAL 207
Query: 74 XXXXGTILDDDKDGVTN------FEKLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRGI 126
+ D G+ + F K+L +FSL N + + + +K +D R
Sbjct: 208 AASLTDYIRDTVYGIKSIKERNVFLKILLSFSLWTNAELLLSVKEQKPGFIKSLDCIRLF 267
Query: 127 NALALLVAHKSMAMA-HNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNL 185
+ ++ H + + + ++ + F + F W + +A + D+F LSG + Y
Sbjct: 268 SMCWVVTGHSFIYLVLSDTFMPVIDFPKHF---WNHLLLNAFVSVDTFFVLSGLVLTYMF 324
Query: 186 LQELERK----GTIDLKSRLINRWFRLFPLFVSLMLFCTYILPDIS---NGPQWNLVVEE 238
+ +K + ++R+ RL P + + F T P I + Q N +V E
Sbjct: 325 FKTTPKKKMIVNPVTWIMFYVHRYLRLTPPIMLFIGFFTVYAPYIQGPFSASQMNQLVME 384
Query: 239 HSRVCEKNMWKSFLFIHNYFGFEEM 263
C+ W++ L+I+++ M
Sbjct: 385 ADE-CKTTWWQNLLYINDFASSNSM 408
>Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical
protein C08B11.4 protein.
Length = 822
Score = 41.5 bits (93), Expect = 7e-04
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 43/283 (15%)
Query: 11 LLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXX- 69
L +G+C+P++C++ D+++ LS+ + A ++C V R S+
Sbjct: 250 LKFGVCMPNTCTNHDVKQMLSFAIRATE-GAVGTKSVCNVDVECRAESYSDAMSENGLAM 308
Query: 70 -------XXXXXXXXGTILD---------DDKDGVT---NFEKLLNAFSLKRNLRKVFDL 110
GT+ D D+K+ F K + AFS+ N ++
Sbjct: 309 FALYLLIATVVLVTFGTLYDLFIVSKAPQDEKNSSAFNHPFIKFILAFSMYTNGSEILQS 368
Query: 111 SDAATRVKGVDAFRGINALALLVAHK-----SMAMAHNPYVNKVSFSEVFGMPWAVIGRS 165
+ + R ++ +++ H + N ++F + F V
Sbjct: 369 KKNDREINSLHGVRFLSMCWIILGHTYYYIGTSLTTDNLVPTLINFPKQFHTQIIV---Q 425
Query: 166 AILYTDSFLYLSGFLNAYNLLQE-LERKGTIDLKSRLIN----------RWFRLFPLFVS 214
A L DSF +LSG L A++ ++ ++ K N R+ R+ P ++
Sbjct: 426 APLAVDSFFFLSGMLAAFSFFKKTMKADPNHPPKLSAFNWQTWPMYYYKRYIRITPTYII 485
Query: 215 LMLFCTYILPDISNGPQWNLVVEEHSRVCEKNMWKSFLFIHNY 257
+MLF + ISNGP W + + C W + ++++N+
Sbjct: 486 VMLFDVTLFTYISNGPFWRPIERQG---CSIAWWTNLIYLNNF 525
>AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane
protein NRF-6 protein.
Length = 822
Score = 41.5 bits (93), Expect = 7e-04
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 43/283 (15%)
Query: 11 LLWGICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXX- 69
L +G+C+P++C++ D+++ LS+ + A ++C V R S+
Sbjct: 250 LKFGVCMPNTCTNHDVKQMLSFAIRATE-GAVGTKSVCNVDVECRAESYSDAMSENGLAM 308
Query: 70 -------XXXXXXXXGTILD---------DDKDGVT---NFEKLLNAFSLKRNLRKVFDL 110
GT+ D D+K+ F K + AFS+ N ++
Sbjct: 309 FALYLLIATVVLVTFGTLYDLFIVSKAPQDEKNSSAFNHPFIKFILAFSMYTNGSEILQS 368
Query: 111 SDAATRVKGVDAFRGINALALLVAHK-----SMAMAHNPYVNKVSFSEVFGMPWAVIGRS 165
+ + R ++ +++ H + N ++F + F V
Sbjct: 369 KKNDREINSLHGVRFLSMCWIILGHTYYYIGTSLTTDNLVPTLINFPKQFHTQIIV---Q 425
Query: 166 AILYTDSFLYLSGFLNAYNLLQE-LERKGTIDLKSRLIN----------RWFRLFPLFVS 214
A L DSF +LSG L A++ ++ ++ K N R+ R+ P ++
Sbjct: 426 APLAVDSFFFLSGMLAAFSFFKKTMKADPNHPPKLSAFNWQTWPMYYYKRYIRITPTYII 485
Query: 215 LMLFCTYILPDISNGPQWNLVVEEHSRVCEKNMWKSFLFIHNY 257
+MLF + ISNGP W + + C W + ++++N+
Sbjct: 486 VMLFDVTLFTYISNGPFWRPIERQG---CSIAWWTNLIYLNNF 525
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 41.1 bits (92), Expect = 0.001
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 25/260 (9%)
Query: 15 ICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNVKRPYSFGKXXXXXXXXXXXXX 74
+C+P SC+ D+ + + LS TA + CT VK+ F
Sbjct: 138 VCLPDSCNHQDMIDIFN-ELSPYPFTAC--SAYCTKNEVKKDTPFWGFSIFLIVMVVIAA 194
Query: 75 XXX------GTI--LDDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRG 125
T+ L K+ T F K+L FSL N + + + + +K +D R
Sbjct: 195 IASIVDYVRETVYGLSSQKENNTFF-KILLTFSLWTNAELLLSVKEQKSGFIKSLDCIRL 253
Query: 126 INALALLVAHKSMAMAHNPYVNKV-SFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAYN 184
++ ++ H + + + V F F W + +A + D+F LSG + AY
Sbjct: 254 LSMCWVVTGHSFLYLILADTLEPVLDFPTYF---WNHLLLNAFVSVDTFFVLSGIVVAYL 310
Query: 185 LLQELERKGTIDLKSR----LINRWFRLFP---LFVSLMLFCTYILPDISNGPQWNLVVE 237
+ K TI ++R+ RL P LF+ T + + + N +
Sbjct: 311 FFKTKLTKKTITSPMTWILFYVHRYLRLTPPVMLFIGFFTVYTPYIQGAFSASELNQMAP 370
Query: 238 EHSRVCEKNMWKSFLFIHNY 257
+ + C+ W++ L+I+N+
Sbjct: 371 Q-AAACKTLWWQNLLYINNF 389
>Z93381-6|CAB07609.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 39.5 bits (88), Expect = 0.003
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 23/258 (8%)
Query: 15 ICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNV-KRPYSFGKXXXXXXXXXXXX 73
+C+P SCS DL + ++S +TA + C+ V K P +G
Sbjct: 153 VCMPYSCSEKDLPTVFN-QISKQPLTACI--AYCSSYPVEKTPAFWGFTSFMAVMIGIAL 209
Query: 74 XXXXGTIL------DDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRGI 126
L +D K + ++L FSL N + + + +K +D R +
Sbjct: 210 LATVIDYLKDALKQEDQKRSDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFL 269
Query: 127 NALALLVAHK-SMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAY-- 183
+ L ++ H S M + + + F G W + SA D+F LSG + +Y
Sbjct: 270 SMLWIVTGHTFSYLMMPDQIQSVLPFP---GRFWNHLILSAFYSVDTFFLLSGLVVSYLF 326
Query: 184 --NLLQELERKGTIDLKSRLINRWFRLFP---LFVSLMLFCTYILPDISNGPQWNLVVEE 238
L+ + K + ++R+ RL P F+ ++ Y + Q N +
Sbjct: 327 FKTKLKVSQIKSPVTWILFYVHRYLRLTPPMIFFIGFLVVYGYYIQGPGVASQLN-QLNP 385
Query: 239 HSRVCEKNMWKSFLFIHN 256
VC N W++ L+I+N
Sbjct: 386 QVDVCVVNWWQNLLYINN 403
>Z83218-8|CAB05693.1| 724|Caenorhabditis elegans Hypothetical
protein C31A11.1 protein.
Length = 724
Score = 39.5 bits (88), Expect = 0.003
Identities = 58/258 (22%), Positives = 102/258 (39%), Gaps = 23/258 (8%)
Query: 15 ICIPSSCSSFDLEEELSYRLSHLGITAKVHNTMCTVKNV-KRPYSFGKXXXXXXXXXXXX 73
+C+P SCS DL + ++S +TA + C+ V K P +G
Sbjct: 153 VCMPYSCSEKDLPTVFN-QISKQPLTACI--AYCSSYPVEKTPAFWGFTSFMAVMIGIAL 209
Query: 74 XXXXGTIL------DDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRGI 126
L +D K + ++L FSL N + + + +K +D R +
Sbjct: 210 LATVIDYLKDALKQEDQKRSDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFL 269
Query: 127 NALALLVAHK-SMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAY-- 183
+ L ++ H S M + + + F G W + SA D+F LSG + +Y
Sbjct: 270 SMLWIVTGHTFSYLMMPDQIQSVLPFP---GRFWNHLILSAFYSVDTFFLLSGLVVSYLF 326
Query: 184 --NLLQELERKGTIDLKSRLINRWFRLFP---LFVSLMLFCTYILPDISNGPQWNLVVEE 238
L+ + K + ++R+ RL P F+ ++ Y + Q N +
Sbjct: 327 FKTKLKVSQIKSPVTWILFYVHRYLRLTPPMIFFIGFLVVYGYYIQGPGVASQLN-QLNP 385
Query: 239 HSRVCEKNMWKSFLFIHN 256
VC N W++ L+I+N
Sbjct: 386 QVDVCVVNWWQNLLYINN 403
>Z81533-8|CAB04331.1| 723|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 723
Score = 39.5 bits (88), Expect = 0.003
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 93 KLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRGINALALLVAHK-SMAMAHNPYVNKVS 150
K+L +FSL N + + + +K +D R ++ L ++ H S M + + +
Sbjct: 245 KILISFSLWTNAELILSVKEQKVGFIKCLDCIRFLSMLWVVSGHTVSNIMFPDVLLPVTT 304
Query: 151 FSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAY----NLLQELERKGTIDLKSRLINRWF 206
F++ F W + +A + D+F LSG + +Y N ++ + K + ++R+
Sbjct: 305 FTKHF---WNHLLLNAFVSVDTFFLLSGIVVSYLFFKNRMKSSQIKSPLTWILFYVHRYL 361
Query: 207 RLFPLFVSLMLFCTYILPDISNGPQW--NLVVEEHS-RVCEKNMWKSFLFIHNY 257
RL P ++ + F + + GP L +S C+K W++ L+I+N+
Sbjct: 362 RLTPPYMIFLGFYI-VYSEYVQGPTAAAGLNAAIYSVESCKKTWWRNLLYINNF 414
>Z93381-5|CAB07608.1| 716|Caenorhabditis elegans Hypothetical
protein F28G4.5 protein.
Length = 716
Score = 38.7 bits (86), Expect = 0.005
Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 26/270 (9%)
Query: 12 LWGICIPSSCSSFDLEEELSYRLSHLGITA-KVHNTMCTVKNVKRPYSFGKXXXXXXXXX 70
L +C+P SCS DL + ++S+ TA K + + V+ + F
Sbjct: 142 LKAVCMPYSCSEKDLPTVYN-QISNQPFTACKAYCSSYPVEKTPAFWGFTSFMAVMFGIA 200
Query: 71 XXXXXXX----GTILDDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRG 125
+D K + ++L FSL N + + + +K +D R
Sbjct: 201 LLATVIDYLKDALKQEDQKRSDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRF 260
Query: 126 INALALLVAHK----------SMAMAHNPYVNKVSFSEVF---GMPWAVIGRSAILYTDS 172
++ L ++ H + N V K V G W + +A D+
Sbjct: 261 VSMLWVVAGHTFTYLMPPVSFQFRIRSNSSVGKNQLLSVLPFTGKFWNHVIMNAFFSVDT 320
Query: 173 FLYLSGFLNAY----NLLQELERKGTIDLKSRLINRWFRLFP-LFVSLMLFCTYILPDIS 227
F LSG + +Y L+ + K I ++R+ RL P + + + F Y
Sbjct: 321 FFLLSGLVVSYLFFKTKLKVSQIKSPITWILFYVHRYLRLTPPIMIFIGFFTVYGFYIQG 380
Query: 228 NGPQWNLVVEEHS-RVCEKNMWKSFLFIHN 256
G + E VCEKN WK+ ++I+N
Sbjct: 381 PGVASQMYKENGEVEVCEKNWWKNLIYINN 410
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 36.3 bits (80), Expect = 0.027
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Query: 111 SDAATRVKGVDAFRGINALALLVAHKSMAMAHNPYVNKVSFSEVFGMPWAVIGRSAILYT 170
++A +V ++ R I+ + +++ H + AM N V + + +A
Sbjct: 268 NEAEGQVTSLNCIRTISTVWVILGHCA-AMLILICTNPVDLLDFTKTYMGALLVNAYFAV 326
Query: 171 DSFLYLSGFLNAYNLLQELE--RKGTIDLKSRL---INRWFRLFPLFVSLMLFCTYILPD 225
D+F ++S FL ++ ++L+ RK I + ++R RL P + +LF T++
Sbjct: 327 DTFFFISAFLLSFLWFKQLQKQRKALISPGGWMMFYVHRIARLSPAYYIAILFVTFVYIR 386
Query: 226 ISNGPQWNLVVEEHSRVCEKNMWKSFLFIHN 256
+ + C++N W + L+I N
Sbjct: 387 MLRDMPAFMSPAIQDDTCQQNYWLNLLYIEN 417
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 35.9 bits (79), Expect = 0.036
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 13/184 (7%)
Query: 82 DDDKDGVTNFEKLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRGINALALLVAHKSMAM 140
+D+K + ++L FSL N + + + +K +D R ++ L ++ H +
Sbjct: 224 EDEKREDSRILQILLTFSLWTNAELLLSVKEQKPGFIKCLDCIRFLSMLWVVTGHTFSYL 283
Query: 141 AHNPYVNKVSFSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAY----NLLQELERKGTID 196
+ S FG W + +A D+F LSG + +Y L+ + K I
Sbjct: 284 TTPDQIE--SILPFFGRFWNHLVMNAFYSVDTFFLLSGLVVSYLFFKTKLKVSQIKSPIT 341
Query: 197 LKSRLINRWFRLF-PLFVSLMLFCTYILPDISNGP-QWNLVVEEHSRV--CEKNMWKSFL 252
++R+ RL PL L F Y GP + + +++ V C+ WK+ +
Sbjct: 342 WILFYVHRYLRLTPPLMFFLGFFVVY--GKYFQGPGVASQLNQQNGEVDTCQTYWWKNLI 399
Query: 253 FIHN 256
+I+N
Sbjct: 400 YINN 403
>Z83218-4|CAB05690.2| 706|Caenorhabditis elegans Hypothetical
protein C31A11.7 protein.
Length = 706
Score = 33.9 bits (74), Expect = 0.14
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 19/178 (10%)
Query: 93 KLLNAFSLKRNLRKVFDLSDAATR-VKGVDAFRGINALALLVAHK-SMAMAHNPYVNKVS 150
K+L FSL N + + + +K +D R ++ L ++ H + + + ++
Sbjct: 242 KMLLTFSLWTNAGVLLSVKEQKPGFIKCLDCIRFLSMLWVVTGHTFTFVIPPDTLLSMSH 301
Query: 151 FSEVFGMPWAVIGRSAILYTDSFLYLSGFLNAYNLLQELERKGTIDLKSRL------INR 204
F++ F W + +A + D+F LSG + AY ++ + I KS L ++R
Sbjct: 302 FTDHF---WNHLLLNAFVSVDTFFLLSGIVVAYLFFKQKHKSSQI--KSPLTWIIFYMHR 356
Query: 205 WFRLFP---LFVSL-MLFCTYILPDISNG--PQWNLVVEEHSRVCEKNMWKSFLFIHN 256
+ RL P +F+ +++ Y+ S ++ + CE WK+ +I+N
Sbjct: 357 YLRLTPPYMIFIGFYIVYGKYVQGPFSASQFSEFENTLLSSIATCESYWWKNLFYINN 414
>Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical
protein K02E11.1 protein.
Length = 729
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 90 NFEKLLNAFSLKRNLRKVFDLSDAATRVKGVDAFRGINALALLVAHKSMAMAHNPYVNKV 149
NF+++L F+ NL V + A G+ F+ +AL L+V H S HN + V
Sbjct: 224 NFQQVLMPFT---NLPHVSEEHKQAIDCNGIRTFK--DALELMVVHPSSMQRHNAGADDV 278
Query: 150 SFSE 153
S ++
Sbjct: 279 STND 282
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 171 DSFLYLSGFLNAYNLLQELERKGTIDLKSRLINRWFRLF 209
D F ++ F N+LQ LE + L+ L NR F +F
Sbjct: 12 DEFKHIVDFFTNQNILQPLETRRVRYLEMLLFNRSFMIF 50
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.138 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,041,429
Number of Sequences: 27539
Number of extensions: 274623
Number of successful extensions: 783
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 742
Number of HSP's gapped (non-prelim): 41
length of query: 303
length of database: 12,573,161
effective HSP length: 81
effective length of query: 222
effective length of database: 10,342,502
effective search space: 2296035444
effective search space used: 2296035444
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -