Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001287-TA|BGIBMGA001287-PA|undefined
(104 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.94
SB_16662| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.94
SB_19995| Best HMM Match : GLTT (HMM E-Value=0.018) 28 1.2
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.2
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.0
SB_786| Best HMM Match : EGF (HMM E-Value=0) 26 6.7
SB_53518| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_44004| Best HMM Match : FTCD_N (HMM E-Value=1.6e-16) 25 8.8
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_7381| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 28.7 bits (61), Expect = 0.94
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 4 RACGL-ILTLFTSAVLSRDCIELTISDKRIITETI 37
+AC + +TL T +V DCI++ +S K + T T+
Sbjct: 545 KACSIGKMTLVTGSVRKEDCIDICVSGKFLNTTTL 579
>SB_16662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.7 bits (61), Expect = 0.94
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 33 ITETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVV 72
+T L TIL+F+ +T + + FNI++ + RFP ++
Sbjct: 35 LTTKSLEMTILEFKIFKETSNKHTAFNILKYFSRFPLKII 74
>SB_19995| Best HMM Match : GLTT (HMM E-Value=0.018)
Length = 218
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 8 LILTLFTSAVLSRDCIELTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQL 63
L +TL L R ++ T D+ + TIL+ T L N T ++ + +I++L
Sbjct: 121 LDITLLDIRTLDRTILDRTTPDRTTLNITILDRTTLDRTTLNITTLDKTTLDIIKL 176
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 10 LTLFTSAVLSRDCIELTISDKRIITETILNSTILKFQHENDTVVESS-RFN 59
+ L TS + D L ++D + T T+LN F H + + S+ RF+
Sbjct: 233 VALATSTTVKTDVSTLVLTDIKTTTSTVLNVARTTFTHTSTEIASSTHRFD 283
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 26.2 bits (55), Expect = 5.0
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 43 LKFQHENDTVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQLYMDSLDRLELW 98
L+ +H + + S I+ WE K+ R+G + + Q D+ + LE W
Sbjct: 1754 LQVKHYHAEAIRSKYLEILDKWEALKKLAASRSGKLGESKLLFQFLRDAKE-LESW 1808
>SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 10 LTLFTSAVLSRDCIELTISDKRIITETILNSTIL 43
+T+ T +++ I +TI+ IIT TI TI+
Sbjct: 44 MTIITMTIITMTIITMTINTMTIITMTINTMTII 77
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 25.8 bits (54), Expect = 6.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 38 LNSTILKFQHEND-TVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQLYMDS 91
LNS + K + T V+S + N ++ + RNG +EQ R + DS
Sbjct: 1134 LNSALQKLMGQRQGTAVQSDKRNSIRFIVPHMNTMTARNGFTEQTRNINPTLTDS 1188
>SB_53518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 25.4 bits (53), Expect = 8.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 65 ERFPKVVVPRNGTSEQCRRDSQLYMDSLDRLELWALK 101
+RF + + SE+CR+ Y+ + RL L ALK
Sbjct: 9 DRFRRRLCAVQKFSEKCRKSETTYLRNDTRLSLTALK 45
>SB_44004| Best HMM Match : FTCD_N (HMM E-Value=1.6e-16)
Length = 317
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 14 TSAVLSRDCIELTISDKRIITETILNSTILKFQH 47
T +V +C ++ I+ R IT+TI S++ F H
Sbjct: 109 TPSVTLEECGKIAINIGRRITDTIKGSSVFFFGH 142
>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 25.4 bits (53), Expect = 8.8
Identities = 9/47 (19%), Positives = 27/47 (57%)
Query: 48 ENDTVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQLYMDSLDR 94
++ + ++ I+Q+ E + K++ + E+CR++ + + +L+R
Sbjct: 394 QDSNTLTQTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLER 440
>SB_7381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 25.4 bits (53), Expect = 8.8
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 38 LNSTILKFQHENDTVVESSRFNIV-QLWERFPKVVVPRNGTSEQCRRDSQLYMDSLDR 94
+N I + +H N+TVV S N+V +L F + + + + +LY+ ++R
Sbjct: 44 VNVNITQMRHANNTVVNSVGRNLVSRLKITFAGETLQDTNRYDVLKTNEELYLSKVER 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,165,980
Number of Sequences: 59808
Number of extensions: 101401
Number of successful extensions: 249
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 236
Number of HSP's gapped (non-prelim): 16
length of query: 104
length of database: 16,821,457
effective HSP length: 72
effective length of query: 32
effective length of database: 12,515,281
effective search space: 400488992
effective search space used: 400488992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)
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