Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001287-TA|BGIBMGA001287-PA|undefined
(104 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021240-1|AAX33388.1| 827|Drosophila melanogaster RE74651p pro... 39 0.001
AE014298-2107|AAN09655.2| 827|Drosophila melanogaster CG33968-P... 39 0.001
AY058329-1|AAL13558.1| 742|Drosophila melanogaster GH10201p pro... 31 0.28
AE014298-1360|AAF46515.1| 742|Drosophila melanogaster CG3106-PA... 31 0.28
BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p pro... 29 1.5
BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p pro... 28 2.0
AY094717-1|AAM11070.1| 487|Drosophila melanogaster GH17724p pro... 28 2.0
AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-P... 28 2.0
AE014297-3014|ABI31191.1| 1192|Drosophila melanogaster CG7956-PC... 28 2.0
AE014297-2520|AAF55555.1| 487|Drosophila melanogaster CG12333-P... 28 2.0
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me... 27 3.4
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ... 27 3.4
AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK protein. 27 4.5
AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK protein. 27 4.5
AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK protein. 27 4.5
AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD... 27 4.5
AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC... 27 4.5
AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB... 27 4.5
AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA... 27 4.5
BT009969-1|AAQ22438.1| 559|Drosophila melanogaster RE64941p pro... 27 6.0
AY069696-1|AAL39841.1| 559|Drosophila melanogaster LD46723p pro... 27 6.0
AJ418713-1|CAD11441.1| 559|Drosophila melanogaster limpet protein. 27 6.0
AE014296-2823|AAS64978.1| 558|Drosophila melanogaster CG32171-P... 27 6.0
AE014296-2822|AAN11714.1| 558|Drosophila melanogaster CG32171-P... 27 6.0
AE014296-2820|AAS64977.1| 559|Drosophila melanogaster CG32171-P... 27 6.0
AE014296-2819|AAF49398.2| 559|Drosophila melanogaster CG32171-P... 27 6.0
BT009929-1|AAQ22398.1| 1936|Drosophila melanogaster SD16537p pro... 26 7.9
AY119614-1|AAM50268.1| 548|Drosophila melanogaster LD42588p pro... 26 7.9
AE014298-2825|AAF48942.2| 1936|Drosophila melanogaster CG8002-PA... 26 7.9
AE014134-162|AAN10486.1| 548|Drosophila melanogaster CG3727-PC,... 26 7.9
AE014134-161|AAF51449.1| 548|Drosophila melanogaster CG3727-PB,... 26 7.9
>BT021240-1|AAX33388.1| 827|Drosophila melanogaster RE74651p
protein.
Length = 827
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 46 QHENDTVVESSRFNIVQLWERFPKVVVP----RN-GTSEQCRRDSQLYMDSLDRLELWAL 100
+ ++D V E R + + +RF + P RN S CRR ++++LD +LWAL
Sbjct: 114 EDDDDQVEEDERAYLYNIGKRFLAITQPFDAARNPDASTLCRRQMHQFLNALDNFDLWAL 173
Query: 101 KNYD 104
K +D
Sbjct: 174 KMHD 177
>AE014298-2107|AAN09655.2| 827|Drosophila melanogaster CG33968-PA
protein.
Length = 827
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 46 QHENDTVVESSRFNIVQLWERFPKVVVP----RN-GTSEQCRRDSQLYMDSLDRLELWAL 100
+ ++D V E R + + +RF + P RN S CRR ++++LD +LWAL
Sbjct: 114 EDDDDQVEEDERAYLYNIGKRFLAITQPFDAARNPDASTLCRRQMHQFLNALDNFDLWAL 173
Query: 101 KNYD 104
K +D
Sbjct: 174 KMHD 177
>AY058329-1|AAL13558.1| 742|Drosophila melanogaster GH10201p
protein.
Length = 742
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 74 RNGTSEQCRRDSQLYMDSLDRLELWALK 101
RN E C RD L DS++ LE WAL+
Sbjct: 69 RNYDDELCDRDINLIRDSINNLEEWALE 96
>AE014298-1360|AAF46515.1| 742|Drosophila melanogaster CG3106-PA
protein.
Length = 742
Score = 31.1 bits (67), Expect = 0.28
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 74 RNGTSEQCRRDSQLYMDSLDRLELWALK 101
RN E C RD L DS++ LE WAL+
Sbjct: 69 RNYDDELCDRDINLIRDSINNLEEWALE 96
>BT023889-1|ABA81823.1| 1557|Drosophila melanogaster RE03775p
protein.
Length = 1557
Score = 28.7 bits (61), Expect = 1.5
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 24 ELTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVVPRNGT--SEQC 81
EL + RI T + + +++ QH ++ + IV LWE + + GT +E C
Sbjct: 623 ELNANKSRIEDITNVGTELIEKQHYAADLINTRMQEIVVLWETLVQ-ASDKKGTKLNEAC 681
Query: 82 RRDSQLYMDSLDRLELW 98
++ Q + +++ +ELW
Sbjct: 682 QQ--QQFNRTIEDIELW 696
>BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p
protein.
Length = 853
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 76 GTSEQCRRDSQLYMDSLDRLELWALKNYD 104
G S C RD + Y+ L ++WA+K D
Sbjct: 101 GVSANCSRDMRSYLGGLSDAKMWAVKMDD 129
>AY094717-1|AAM11070.1| 487|Drosophila melanogaster GH17724p
protein.
Length = 487
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 43 LKFQHENDTVVESSRFNIVQLWERFPKVVVPRNG-TSEQCRRDSQLYMDSLDRLE 96
+KF + D V+ S +W+ VP+ G +SE+ DS ++ DR++
Sbjct: 208 IKFHQQRDLVLTGSGDGTAHIWQAAVNWEVPKKGHSSEEELDDSDEQVEDRDRVD 262
>AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-PB
protein.
Length = 853
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 76 GTSEQCRRDSQLYMDSLDRLELWALKNYD 104
G S C RD + Y+ L ++WA+K D
Sbjct: 101 GVSANCSRDMRSYLGGLSDAKMWAVKMDD 129
>AE014297-3014|ABI31191.1| 1192|Drosophila melanogaster CG7956-PC,
isoform C protein.
Length = 1192
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 23 IELTISDKRIITET-ILNSTILKFQHENDTVVESSRFNIVQLWE 65
I L + ++I T+T +L+ TIL ++ SSR ++++LWE
Sbjct: 1138 IGLNLDPRKIATKTGVLSPTILSAENSPPERDPSSRDHLLELWE 1181
>AE014297-2520|AAF55555.1| 487|Drosophila melanogaster CG12333-PA
protein.
Length = 487
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 43 LKFQHENDTVVESSRFNIVQLWERFPKVVVPRNG-TSEQCRRDSQLYMDSLDRLE 96
+KF + D V+ S +W+ VP+ G +SE+ DS ++ DR++
Sbjct: 208 IKFHQQRDLVLTGSGDGTAHIWQAAVNWEVPKKGHSSEEELDDSDEQVEDRDRVD 262
>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
D.melanogaster alpha-spectrin mRNA, complete cds. ).
Length = 2415
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 24 ELTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVVPRNGT--SEQC 81
EL + RI T + + +++ QH + + IV LWE + + GT +E C
Sbjct: 623 ELNANKSRIEDITNVGTELIEKQHYAADQINTRMQEIVVLWETLVQ-ASDKKGTKLNEAC 681
Query: 82 RRDSQLYMDSLDRLELW 98
++ Q + +++ +ELW
Sbjct: 682 QQ--QQFNRTIEDIELW 696
>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
protein.
Length = 2415
Score = 27.5 bits (58), Expect = 3.4
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 24 ELTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVVPRNGT--SEQC 81
EL + RI T + + +++ QH + + IV LWE + + GT +E C
Sbjct: 623 ELNANKSRIEDITNVGTELIEKQHYAADQINTRMQEIVVLWETLVQ-ASDKKGTKLNEAC 681
Query: 82 RRDSQLYMDSLDRLELW 98
++ Q + +++ +ELW
Sbjct: 682 QQ--QQFNRTIEDIELW 696
>AF069997-1|AAC62234.1| 1027|Drosophila melanogaster CLOCK
protein.
Length = 1027
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 42 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 82
>AF067207-1|AAD10630.1| 1023|Drosophila melanogaster CLOCK
protein.
Length = 1023
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 38 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 78
>AF065133-1|AAC39101.1| 1015|Drosophila melanogaster CLOCK
protein.
Length = 1015
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 38 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 78
>AE014296-1321|AAX52753.1| 1027|Drosophila melanogaster CG7391-PD,
isoform D protein.
Length = 1027
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 42 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 82
>AE014296-1320|AAS65057.1| 1027|Drosophila melanogaster CG7391-PC,
isoform C protein.
Length = 1027
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 42 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 82
>AE014296-1319|AAN12019.1| 1023|Drosophila melanogaster CG7391-PB,
isoform B protein.
Length = 1023
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 38 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 78
>AE014296-1318|AAF50516.1| 1023|Drosophila melanogaster CG7391-PA,
isoform A protein.
Length = 1023
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 25 LTISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWE 65
++ S +++ T+L STI ++ N+ S F I Q W+
Sbjct: 38 ISTSSRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDWK 78
>BT009969-1|AAQ22438.1| 559|Drosophila melanogaster RE64941p
protein.
Length = 559
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 112 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 142
>AY069696-1|AAL39841.1| 559|Drosophila melanogaster LD46723p
protein.
Length = 559
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 112 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 142
>AJ418713-1|CAD11441.1| 559|Drosophila melanogaster limpet protein.
Length = 559
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 112 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 142
>AE014296-2823|AAS64978.1| 558|Drosophila melanogaster CG32171-PH,
isoform H protein.
Length = 558
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 111 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 141
>AE014296-2822|AAN11714.1| 558|Drosophila melanogaster CG32171-PD,
isoform D protein.
Length = 558
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 111 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 141
>AE014296-2820|AAS64977.1| 559|Drosophila melanogaster CG32171-PG,
isoform G protein.
Length = 559
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 112 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 142
>AE014296-2819|AAF49398.2| 559|Drosophila melanogaster CG32171-PB,
isoform B protein.
Length = 559
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 55 SSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
SSR N + +E+ P +VPR G+ C R+ Q+
Sbjct: 112 SSRIN--RYFEQLPDEMVPRLGSEGACSRERQI 142
>BT009929-1|AAQ22398.1| 1936|Drosophila melanogaster SD16537p protein.
Length = 1936
Score = 26.2 bits (55), Expect = 7.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 9 ILTLFTSAVLSRDCIELTISDKRIITETILNSTILKFQHENDTV 52
+L LF + LSR + I D+ I+ +LN T+L+ Q ND++
Sbjct: 1392 VLDLFPTRNLSRTYVSRDIQDQDIVGINLLN-TMLRPQCLNDSL 1434
>AY119614-1|AAM50268.1| 548|Drosophila melanogaster LD42588p
protein.
Length = 548
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 46 QHENDTVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
QH+N + ++ N Q+++ P+V VP G+ +R S L
Sbjct: 34 QHQNLNLNQNQNLNQNQIYQYRPQVPVPVPGSPAHHQRHSSL 75
>AE014298-2825|AAF48942.2| 1936|Drosophila melanogaster CG8002-PA
protein.
Length = 1936
Score = 26.2 bits (55), Expect = 7.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 9 ILTLFTSAVLSRDCIELTISDKRIITETILNSTILKFQHENDTV 52
+L LF + LSR + I D+ I+ +LN T+L+ Q ND++
Sbjct: 1392 VLDLFPTRNLSRTYVSRDIQDQDIVGINLLN-TMLRPQCLNDSL 1434
>AE014134-162|AAN10486.1| 548|Drosophila melanogaster CG3727-PC,
isoform C protein.
Length = 548
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 46 QHENDTVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
QH+N + ++ N Q+++ P+V VP G+ +R S L
Sbjct: 34 QHQNLNLNQNQNLNQNQIYQYRPQVPVPVPGSPAHHQRHSSL 75
>AE014134-161|AAF51449.1| 548|Drosophila melanogaster CG3727-PB,
isoform B protein.
Length = 548
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 46 QHENDTVVESSRFNIVQLWERFPKVVVPRNGTSEQCRRDSQL 87
QH+N + ++ N Q+++ P+V VP G+ +R S L
Sbjct: 34 QHQNLNLNQNQNLNQNQIYQYRPQVPVPVPGSPAHHQRHSSL 75
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.322 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,436,342
Number of Sequences: 52641
Number of extensions: 143985
Number of successful extensions: 301
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 283
Number of HSP's gapped (non-prelim): 33
length of query: 104
length of database: 24,830,863
effective HSP length: 74
effective length of query: 30
effective length of database: 20,935,429
effective search space: 628062870
effective search space used: 628062870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 55 (26.2 bits)
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