Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001287-TA|BGIBMGA001287-PA|undefined
(104 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6) i... 28 1.0
At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6) i... 28 1.0
At1g11120.1 68414.m01273 expressed protein 27 1.8
At2g12190.1 68415.m01316 cytochrome P450, putative 27 2.4
At1g64950.1 68414.m07362 cytochrome P450, putative similar to cy... 27 2.4
At4g13240.1 68417.m02059 hypothetical protein contains Pfam prof... 27 3.1
At1g64940.1 68414.m07361 cytochrome P450, putative similar to cy... 26 4.2
At4g16880.1 68417.m02548 disease resistance protein-related cont... 26 5.5
At3g27470.1 68416.m03433 expressed protein contains Pfam profile... 26 5.5
At4g31570.1 68417.m04483 expressed protein 25 7.3
At2g13690.1 68415.m01510 PRLI-interacting factor, putative simil... 25 7.3
At3g25790.1 68416.m03210 myb family transcription factor contain... 25 9.6
At1g77270.1 68414.m08999 expressed protein 25 9.6
>At4g23130.2 68417.m03334 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 663
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 DCIELTISDKRIITETILNSTILKFQHENDTVVESSRFN 59
+C+ L SD+ I +T+ +TI+ + + T +S RFN
Sbjct: 122 ECM-LGYSDRNIFMDTVTTTTIITWNTQKVTADQSDRFN 159
>At4g23130.1 68417.m03333 receptor-like protein kinase 6 (RLK6)
identical to receptor-like protein kinase 6 [Arabidopsis
thaliana] GI:13506749; contains Pfam domain PF00069:
Protein kinase domain
Length = 659
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 21 DCIELTISDKRIITETILNSTILKFQHENDTVVESSRFN 59
+C+ L SD+ I +T+ +TI+ + + T +S RFN
Sbjct: 122 ECM-LGYSDRNIFMDTVTTTTIITWNTQKVTADQSDRFN 159
>At1g11120.1 68414.m01273 expressed protein
Length = 367
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/46 (26%), Positives = 27/46 (58%)
Query: 27 ISDKRIITETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVV 72
I ++ ++ E + +T+L ++N TV +++ I + E+ P +VV
Sbjct: 131 IDEETVVKEVLSETTLLTSSNDNSTVEKTTLTKIQEEEEKKPGIVV 176
>At2g12190.1 68415.m01316 cytochrome P450, putative
Length = 512
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 56 SRFNIVQLWERFPKVVV 72
SRFNI+ LW +F K+++
Sbjct: 215 SRFNILNLWPKFTKLIL 231
>At1g64950.1 68414.m07362 cytochrome P450, putative similar to
cytochrome P450 89A2 (CYPLXXXIX) (SP:Q42602)
[Arabidopsis thaliana];similar to cytochrome P450
(GI:438242) [Solanum melongena]
Length = 510
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 56 SRFNIVQLWERFPKVVV 72
SRFNI+ LW +F K+++
Sbjct: 215 SRFNILNLWPKFTKLIL 231
>At4g13240.1 68417.m02059 hypothetical protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 517
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 68 PKVVVPRNGTSEQCRRDSQLYMDSLDRLELWAL 100
P V VP NG SE RR DS+ +++ A+
Sbjct: 226 PPVKVPPNGLSESARRMLHFQKDSVSQVQKAAM 258
>At1g64940.1 68414.m07361 cytochrome P450, putative similar to
cytochrome p450 GI:438242 from [Solanum melongena]
Length = 511
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 56 SRFNIVQLWERFPKVV 71
SRFNI+ LW +F K++
Sbjct: 216 SRFNILTLWPKFTKLI 231
>At4g16880.1 68417.m02548 disease resistance protein-related
contains weak similarity to disease resistance protein
RPP4 [Arabidopsis thaliana] gi|20270890|gb|AAM18462
Length = 230
Score = 25.8 bits (54), Expect = 5.5
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 30 KRIITETILNSTILKFQHENDTVVESSRFNIVQLWERF-PKVVVPRNGTSEQCRRDSQLY 88
K++ L++ +LK + + ++ NI+ LW R+ P +P N +E +L
Sbjct: 21 KQVKGSNFLHTCLLKHTYLSTCMLPKISSNIICLWWRYCPLKRLPSNFKAEYL---VELI 77
Query: 89 MDSLDRLELW 98
M+ D +LW
Sbjct: 78 MEDSDLEKLW 87
>At3g27470.1 68416.m03433 expressed protein contains Pfam profile
PF05212: Protein of unknown function (DUF707)
Length = 398
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 73 PRNGTSEQCRRDSQLYMDSLDRLE 96
P G E+CRR+ ++ D LD E
Sbjct: 357 PWEGVRERCRREWTMFQDRLDDAE 380
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 36 TILNSTILKFQHENDTVVESS 56
T+LN+ +LKFQ E + +VE +
Sbjct: 708 TLLNNKLLKFQGEKEHLVEEN 728
>At2g13690.1 68415.m01510 PRLI-interacting factor, putative similar
to PRLI-interacting factor G [Arabidopsis thaliana]
GI:11139264 (PMID:9765207); supporting cDNA
gi|26450291|dbj|AK117606.1|
Length = 544
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 34 TETILNSTILKFQHENDTVVESSRFNIVQLWERFPKVVVPRNGTSE 79
T T + T + E+D VV S N+ R PK+ V +G SE
Sbjct: 95 TVTTMQETETTQEEEDDAVVVDSTPNLRSESFRAPKIEVTGSGLSE 140
>At3g25790.1 68416.m03210 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 357
Score = 25.0 bits (52), Expect = 9.6
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 6 CGLILTLFTSAVLSRDCIELTISDKRIITET-ILNSTILKFQHENDTVVESSRFNIVQLW 64
CG IL LF S IE + DK E + T + F +N ++S VQLW
Sbjct: 79 CGRILDLFIPIKHSSTSIEEEVDDKDDDDEEHQSHETDIDFDDKN---MKSEWLKSVQLW 135
Query: 65 ERFPKVV 71
+ VV
Sbjct: 136 NQSDAVV 142
>At1g77270.1 68414.m08999 expressed protein
Length = 682
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 6 CGLILTLFTSAVLSRD-CIELTISDKRIITETILNSTILKFQHENDT 51
CG ++ L S+D + K + +TILN I++ + + DT
Sbjct: 63 CGKMMDLCVERNASKDDALAKKNPKKSAVAKTILNKEIIEIESDTDT 109
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,222,711
Number of Sequences: 28952
Number of extensions: 74044
Number of successful extensions: 193
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 183
Number of HSP's gapped (non-prelim): 13
length of query: 104
length of database: 12,070,560
effective HSP length: 71
effective length of query: 33
effective length of database: 10,014,968
effective search space: 330493944
effective search space used: 330493944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 52 (25.0 bits)
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