Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001286-TA|BGIBMGA001286-PA|IPR003599|Immunoglobulin
subtype, IPR003598|Immunoglobulin subtype 2,
IPR007110|Immunoglobulin-like, IPR013106|Immunoglobulin V-set,
IPR013151|Immunoglobulin
(312 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 32 0.006
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 32 0.007
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 32 0.007
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 31 0.017
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 23 4.5
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 6.0
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 22 7.9
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 32.3 bits (70), Expect = 0.006
Identities = 34/127 (26%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 143 EDGTLQIKFPQHRDSGIYECQI--STTPHMSHYIHLNVVEPTTEIIGGPELYIDRGSTIN 200
EDGTL I Q + G Y C+ +S I ++V P I RG
Sbjct: 736 EDGTLSINNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAV 795
Query: 201 LTCVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSGTY 260
L C E P I WN N+ + S S L I++ +DS +
Sbjct: 796 LQCEA--QGEKPIGILWNMNNKRLDPKSDSRYTIREEILANGVLSDLSIKRTERSDSALF 853
Query: 261 QCNPSNA 267
C +NA
Sbjct: 854 TCVATNA 860
Score = 30.7 bits (66), Expect = 0.017
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 144 DGTLQIKFPQHR-DSGIYECQISTTPHMSHYIHLNV---VEPTTEIIGGPELYIDRGSTI 199
+GTL I+ + D Y C S L V V PT + +L ++ G
Sbjct: 542 NGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVPPTIQQFSFTKLPMNAGEFA 601
Query: 200 NLTCVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSGT 259
NL C+V + + P I W++ + G V+ +K S L+I +G
Sbjct: 602 NLQCIV-PTGDLPLNIRWSYPG-----EEMGGSSGVLAKKVADRVSMLMISVITARHAGE 655
Query: 260 YQCNPSNA 267
Y C NA
Sbjct: 656 YVCTAENA 663
Score = 28.7 bits (61), Expect = 0.069
Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 7/124 (5%)
Query: 143 EDGTLQIKFPQHRDSGIYECQISTTPHMSH-YIHLNV---VEPTTEIIGGPELYIDRGST 198
E+ L+I+ + D G+Y+C + + L + EP E + G +
Sbjct: 351 EEAVLRIESVKKEDKGMYQCFVRNDQESAQATAELKLGGRFEPPQIRQAFAEETLQPGPS 410
Query: 199 INLTCVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSG 258
+ L CV +P P I W + +S VT G+ S L I D G
Sbjct: 411 MFLKCVASGNPTPE--ITWELDGKRLSNTERLQVGQYVTVNGD-VVSHLNISSTHTNDGG 467
Query: 259 TYQC 262
Y+C
Sbjct: 468 LYKC 471
Score = 27.1 bits (57), Expect = 0.21
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 236 VTEKGETTTSFLLIQQARPADSGTYQCNPSNAQSKSIVVHVLNGEYP 282
+ E+ + L+I++AR DSG Y C +N+ V VL P
Sbjct: 261 LNERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAP 307
Score = 27.1 bits (57), Expect = 0.21
Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Query: 147 LQIKFPQHRDSGIYEC-QISTTPHMSHYIHLNVVEPTTEIIGGPELYIDRGSTINLTCVV 205
L I D G+Y+C S H LNV I + I G T+ +TC V
Sbjct: 456 LNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYG-LPFIRHMDKKAIVAGETLRVTCPV 514
Query: 206 LYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSGTYQCNPS 265
+ P I W + ++ P V G + ++ R +D TY C
Sbjct: 515 --AGYPIESIVWERDTRVL----PINRKQKVFPNG----TLIIENVERMSDQATYTCVAR 564
Query: 266 NAQSKS 271
NAQ S
Sbjct: 565 NAQGYS 570
Score = 23.8 bits (49), Expect = 2.0
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 144 DGTLQIKFPQHRDSGIYECQISTTPHMSHYIHLNVVEPTTEIIGGPELYIDRGSTINLTC 203
+G+L IK D+G Y C + T H +V P++ + +T +LT
Sbjct: 1328 EGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAPPH---SPQITLTATTTNSLTM 1384
Query: 204 VVLYSPEPPAYI 215
V P A I
Sbjct: 1385 KVRPHPTDNAPI 1396
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 247 LLIQQARPADSGTYQCNPSNAQSKSIVVHVL 277
L I++ D+G Y C N V H L
Sbjct: 1331 LFIKEVDRTDAGEYSCYVENTFGHDTVTHQL 1361
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 247 LLIQQARPADSGTYQCNPSNAQSKS 271
L I+ + D G YQC N Q +
Sbjct: 355 LRIESVKKEDKGMYQCFVRNDQESA 379
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 31.9 bits (69), Expect = 0.007
Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 144 DGTLQIKFPQHRDSGIYECQISTT--PHMSHYIHLNVVEPTTEIIGGPELYIDRGSTINL 201
+GTL ++ + G Y CQ S + + L V + + +G T L
Sbjct: 768 NGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATL 827
Query: 202 TCVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTE-KGETTTSFLLIQQARPADSGTY 260
C V + P + W I S V+V E + + L I A +DSG Y
Sbjct: 828 HCEV--HGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAY 885
Query: 261 QCNPSN 266
C SN
Sbjct: 886 FCQASN 891
Score = 25.0 bits (52), Expect = 0.85
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 156 DSGIYECQISTTP-HMSHYIHLNVVE-PTTEIIGGPELYIDRGSTINLTCVVLYSPEPPA 213
D G Y C ++H LNV P +I P++ G T+ L C V + P
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLI--PKVTAVAGETLRLKCPV--AGYPIE 548
Query: 214 YIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSGTYQCNPSNAQSKS 271
I W + + D + +K + ++ + D+G Y C+ N Q S
Sbjct: 549 EIKWERANRELPDD--------LRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHS 598
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 247 LLIQQARPADSGTYQCNPSNAQSKSIVVHVLNGEYP 282
L++ + D G Y C NAQ + + L + P
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVP 1404
Score = 21.8 bits (44), Expect = 7.9
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 145 GTLQIKFPQHRDSGIYECQISTTP--HMSHYIHLNVVEPTTEII 186
G L + Q +D G Y CQ+ HY V P+ ++
Sbjct: 1367 GELMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVPPSAPVL 1410
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 31.9 bits (69), Expect = 0.007
Identities = 32/126 (25%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 144 DGTLQIKFPQHRDSGIYECQISTT--PHMSHYIHLNVVEPTTEIIGGPELYIDRGSTINL 201
+GTL ++ + G Y CQ S + + L V + + +G T L
Sbjct: 764 NGTLLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSPYFAAPSRLVTVKKGDTATL 823
Query: 202 TCVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTE-KGETTTSFLLIQQARPADSGTY 260
C V + P + W I S V+V E + + L I A +DSG Y
Sbjct: 824 HCEV--HGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISSAEASDSGAY 881
Query: 261 QCNPSN 266
C SN
Sbjct: 882 FCQASN 887
Score = 25.0 bits (52), Expect = 0.85
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 14/118 (11%)
Query: 156 DSGIYECQISTTP-HMSHYIHLNVVE-PTTEIIGGPELYIDRGSTINLTCVVLYSPEPPA 213
D G Y C ++H LNV P +I P++ G T+ L C V + P
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLI--PKVTAVAGETLRLKCPV--AGYPIE 548
Query: 214 YIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSGTYQCNPSNAQSKS 271
I W + + D + +K + ++ + D+G Y C+ N Q S
Sbjct: 549 EIKWERANRELPDD--------LRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHS 598
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 247 LLIQQARPADSGTYQCNPSNAQSKSIVVHVLNGEYP 282
L++ + D G Y C NAQ + + L + P
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVP 1400
Score = 21.8 bits (44), Expect = 7.9
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 145 GTLQIKFPQHRDSGIYECQISTTP--HMSHYIHLNVVEPTTEII 186
G L + Q +D G Y CQ+ HY V P+ ++
Sbjct: 1363 GELMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQVPPSAPVL 1406
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 30.7 bits (66), Expect = 0.017
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 144 DGTLQIKFPQHRDSGIYECQISTTPHMSHYIHLNVVEPTTEIIGGPELYIDR-GSTINLT 202
DG+L + Q +G Y C + H+ + E+ P R N+
Sbjct: 364 DGSLYLTKVQLIHAGNYTCHAVRNQDVVQ-THVLTIHTIPEVKVTPRFQAKRLKEEANIR 422
Query: 203 CVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPADSGTYQC 262
C V P P + W ND +++D P + G T L+I+ AD+G Y C
Sbjct: 423 CHVAGEPLPR--VQWLKNDEALNHDQPDKYDLI----GNGTK--LIIKNVDYADTGAYMC 474
Query: 263 NPSN 266
S+
Sbjct: 475 QASS 478
Score = 23.8 bits (49), Expect = 2.0
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 144 DGT-LQIKFPQHRDSGIYECQISTTPHMSHYIHLNVVE----PTTE 184
+GT L IK + D+G Y CQ S+ ++ I VV+ PTTE
Sbjct: 455 NGTKLIIKNVDYADTGAYMCQASSIGGITRDISSLVVQEQPTPTTE 500
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 231 GGVSVVTEKGETTTSFLLIQQARPADSGTYQCNPSNAQ 268
G VS ++ ++ R AD +Y C P N Q
Sbjct: 665 GYVSHANQRNMYKLDLKNMKYTRSADLSSYNCVPINVQ 702
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 22.6 bits (46), Expect = 4.5
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 196 GSTINLTCVVLYSPEPPAYIFWNHNDAIISYDSPRGGVSVVTEKGETTTSFLLIQQARPA 255
G I C+ P P I W D I Y V +T S + I A
Sbjct: 37 GRKITFFCMATGFPRPE--ITWL-KDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQK 93
Query: 256 DSGTYQCNPSN 266
D+G Y+C N
Sbjct: 94 DAGYYECQADN 104
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 6.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 66 PRPTPRTGPYFDLVASKNVTALLGKTAYLNWR 97
P+P P G DL+ K TA K Y ++
Sbjct: 37 PKPVPFFGTTKDLILVKKSTAHFVKDIYEKYK 68
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 117 DIHLLTVGRYTYTSDQRFRAIHLP 140
DIH + G+ T TSD+ R I P
Sbjct: 131 DIHRVLPGKPTTTSDELKRGIINP 154
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.133 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,463
Number of Sequences: 429
Number of extensions: 3842
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 25
length of query: 312
length of database: 140,377
effective HSP length: 58
effective length of query: 254
effective length of database: 115,495
effective search space: 29335730
effective search space used: 29335730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
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