GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001285-TA|BGIBMGA001285-PA|undefined
         (79 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.     31   0.42 
AC006017-3|AAD45822.1| 1813|Homo sapiens WUGSC:H_DJ0981O07.3 pro...    31   0.42 
AK127504-1|BAC87010.1|  862|Homo sapiens protein ( Homo sapiens ...    27   6.9  
BC035813-1|AAH35813.1|  533|Homo sapiens procollagen-proline, 2-...    27   9.1  
BC017062-1|AAH17062.1|  504|Homo sapiens P4HA2 protein protein.        27   9.1  
AY358970-1|AAQ89329.1|  533|Homo sapiens P4HA2 protein.                27   9.1  
AL163248-2|CAB90429.3| 1574|Homo sapiens containing human KIAA07...    27   9.1  
AJ314859-1|CAC85688.1|  533|Homo sapiens Prolyl 4-hydroxylase al...    27   9.1  
AB018257-1|BAA34434.2| 1780|Homo sapiens KIAA0714 protein protein.     27   9.1  

>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
          Length = 4025

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 17   HMRPFGTGLKVQGNQLLGTFKSSYSMLDAIFDY 49
            H  P+G+G    GN+LLGTF S  + L+ + DY
Sbjct: 2971 HFLPYGSGQFNSGNRLLGTFGS--ATLEGVSDY 3001


>AC006017-3|AAD45822.1| 1813|Homo sapiens WUGSC:H_DJ0981O07.3
           protein.
          Length = 1813

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 17  HMRPFGTGLKVQGNQLLGTFKSSYSMLDAIFDY 49
           H  P+G+G    GN+LLGTF S  + L+ + DY
Sbjct: 759 HFLPYGSGQFNSGNRLLGTFGS--ATLEGVSDY 789


>AK127504-1|BAC87010.1|  862|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45597 fis, clone BRTHA3018409, weakly  similar
           to Mus musculus synaptotagmin-like 4 (Sytl4). ).
          Length = 862

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 18  MRPFGTGLKVQGNQLLGTFKSSYSMLDAIFDYCGSGKEETHIPYAPLRYRSKSTG 72
           MR    GL+ Q NQ          + D + D+CGS +    IP  P  Y +   G
Sbjct: 654 MRDKSNGLESQVNQCDKMLVGDALVTDLLVDFCGS-RSGVEIPRTPQLYVAHEIG 707


>BC035813-1|AAH35813.1|  533|Homo sapiens procollagen-proline,
           2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase),
           alph protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 16  YHMRPFGTGLKVQGNQLLGTFKSSYSMLDA 45
           +  RPF +GLK +GN+ L TF +  S ++A
Sbjct: 433 FSRRPFDSGLKTEGNR-LATFLNYMSDVEA 461


>BC017062-1|AAH17062.1|  504|Homo sapiens P4HA2 protein protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 16  YHMRPFGTGLKVQGNQLLGTFKSSYSMLDA 45
           +  RPF +GLK +GN+ L TF +  S ++A
Sbjct: 404 FSRRPFDSGLKTEGNR-LATFLNYMSDVEA 432


>AY358970-1|AAQ89329.1|  533|Homo sapiens P4HA2 protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 16  YHMRPFGTGLKVQGNQLLGTFKSSYSMLDA 45
           +  RPF +GLK +GN+ L TF +  S ++A
Sbjct: 433 FSRRPFDSGLKTEGNR-LATFLNYMSDVEA 461


>AL163248-2|CAB90429.3| 1574|Homo sapiens containing human KIAA0714
           protein protein.
          Length = 1574

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 38  SSYSMLDAIFDYCGSGKEETHIP 60
           SS  +L  +F  C   KE+TH+P
Sbjct: 650 SSEDLLLTLFQLCAQSKEKTHLP 672


>AJ314859-1|CAC85688.1|  533|Homo sapiens Prolyl 4-hydroxylase alpha
           IIa subunit protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 16  YHMRPFGTGLKVQGNQLLGTFKSSYSMLDA 45
           +  RPF +GLK +GN+ L TF +  S ++A
Sbjct: 433 FSRRPFDSGLKTEGNR-LATFLNYMSDVEA 461


>AB018257-1|BAA34434.2| 1780|Homo sapiens KIAA0714 protein protein.
          Length = 1780

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 38  SSYSMLDAIFDYCGSGKEETHIP 60
           SS  +L  +F  C   KE+TH+P
Sbjct: 856 SSEDLLLTLFQLCAQSKEKTHLP 878


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.320    0.138    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,637,909
Number of Sequences: 224733
Number of extensions: 383768
Number of successful extensions: 530
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 526
Number of HSP's gapped (non-prelim): 9
length of query: 79
length of database: 73,234,838
effective HSP length: 58
effective length of query: 21
effective length of database: 60,200,324
effective search space: 1264206804
effective search space used: 1264206804
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)