Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001284-TA|BGIBMGA001284-PA|undefined
         (242 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/15 (33%), Positives = 10/15 (66%)

Query: 106 YWVLEMPGGDGWELG 120
           +W++  P G  +E+G
Sbjct: 313 FWIIVAPAGSNFEIG 327


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 74  REFINTVKKGDVLITGRGVGGLIGHAAIMTSDYWV 108
           + FI  +   D+ ITG+    +     +   DY+V
Sbjct: 365 QRFIQQIGNSDIAITGKNFFSITRGLILSFVDYFV 399


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.137    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,041
Number of Sequences: 317
Number of extensions: 2799
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 242
length of database: 114,650
effective HSP length: 55
effective length of query: 187
effective length of database: 97,215
effective search space: 18179205
effective search space used: 18179205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)