Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001284-TA|BGIBMGA001284-PA|undefined
(242 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 31 0.20
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 28 1.1
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 28 1.1
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 28 1.1
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 28 1.1
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 28 1.1
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 28 1.1
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 28 1.1
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 28 1.1
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 28 1.1
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 28 1.1
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 28 1.1
SPAC4A8.07c |||sphingoid long chain base |Schizosaccharomyces po... 28 1.4
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 27 2.5
SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces... 27 3.3
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 25 10.0
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 10.0
SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5 |Schiz... 25 10.0
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 25 10.0
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 30.7 bits (66), Expect = 0.20
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 12 ESFGKDERDIFRDIYKEYRSLNGSEPINYHDWLVMNNFGILSDTQESLFQRKISKRSTVD 71
E+ G D D+ +Y + NG E I + N G L + +F ++K+S +
Sbjct: 454 ENAGLDPTDVISKLYAAHHKENG-ESIGVD--VECENDGTLDAKEAGIFDVLLAKKSAIR 510
Query: 72 NKREFINTVKKGDVLITGRGVGG 94
E + TV D ++ + GG
Sbjct: 511 LATETVLTVLNVDQVVMSKPAGG 533
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 51 ILSDTQESLFQRKISKRSTVDNKREFINTVKKGDVLITGRGVGGLIGH----AAIMTSDY 106
+ +E L I + D K + I + GD+++ R G + A +
Sbjct: 1163 VFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNKLAPSFAGPF 1222
Query: 107 WVLEMPGGDGWELGIPDN 124
+VL+ G + +EL +PD+
Sbjct: 1223 YVLQKSGPNNYELDLPDS 1240
>SPAC4A8.07c |||sphingoid long chain base |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 458
Score = 27.9 bits (59), Expect = 1.4
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 107 WVLEMPGGDGWELGIPDNNRQVPKDQWFD-MHASDWTTVYRCTDAEAAVMAARWADRTYY 165
WV + G + L + +V W D + SD Y A + +R +
Sbjct: 55 WV-DKTGPNSVTLSYVSRSSKVATKCWVDFVENSDQFCEYLLDVAYKGIKRSR-RFIVFI 112
Query: 166 NPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGSKSVIKDLSL 216
NP GG+ K KHI ++S+ S C ++ + +KS+ K+L +
Sbjct: 113 NPHGGKGKAKHIWESEAEPVFSSAHSICEVVLTRR---KDHAKSIAKNLDV 160
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 2.5
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 29 YRSLNGSEPINYHDWLVMNNFGILSDTQESLF--QRKISKRSTVDNK-REFINTVKKGDV 85
Y+ L+ EPI W++ N+ + S++ + K+S+ V+ K RE NT ++G
Sbjct: 499 YKELDSFEPITKEAWMLGNSCFNRARIAHSIYHWEYKVSRHIQVELKFREASNTSEQGKN 558
Query: 86 LI 87
++
Sbjct: 559 IV 560
>SPBC1604.19c |||TRAPP complex subunit Trs85 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 658
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 119 LGIPDNNRQVPKDQWFDMHASDWTTVYRCTDAEAAVMAARWADRTYYNPSGGEKKVKHI 177
+G+ D NR+ WF A W C AE + A+R Y+ SG E +H+
Sbjct: 586 VGVTDGNRRRKAAFWFAYSAGFWRDCGHCKMAE---ICWNLANRV-YSKSGWESLSEHM 640
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 199 QAYYFGTGSKSVI----KDLSLIGRLIVPSTIPS 228
Q FGT + SV +D S +G L +PST+PS
Sbjct: 197 QLLAFGTDAGSVEFWDPRDRSRVGILEIPSTVPS 230
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 102 MTSDYWVLEMPGGDGWELGIPDNNRQVPKDQWFD 135
M S V PG W+ G +N R V D W++
Sbjct: 245 MDSRVLVQSDPGDLPWDRGYSENWRAVMGDHWYN 278
>SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 261
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 63 KISKRSTVDNKRE-FINTVKKGDVLITGRGVGGLIGHAAIMTSDYW 107
KI + T+D R F N +K+ D + G G+I + T YW
Sbjct: 111 KILQMETMDTFRTYFFNCLKESDYVRNGSS-SGIIALSKAETDTYW 155
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 25.0 bits (52), Expect = 10.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 22 FRDIY-KEYRSLNGSEPINYHDWLVMNNFGILSDTQESLFQRKI 64
FR+I K YR N PI+Y + V +F + S +F++KI
Sbjct: 2142 FREILLKSYRQKN--IPISYQEIKVDLDFALRSPNPGDIFEKKI 2183
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.137 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,230,514
Number of Sequences: 5004
Number of extensions: 52834
Number of successful extensions: 150
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 148
Number of HSP's gapped (non-prelim): 19
length of query: 242
length of database: 2,362,478
effective HSP length: 71
effective length of query: 171
effective length of database: 2,007,194
effective search space: 343230174
effective search space used: 343230174
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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