Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001284-TA|BGIBMGA001284-PA|undefined
(242 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 28 5.3
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 28 5.3
AL132951-12|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 28 5.3
AL132951-11|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 28 5.3
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 28 5.3
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 28 5.3
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 28 5.3
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 28 7.0
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 27 9.2
U50068-8|AAB37739.1| 865|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>AL132951-12|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>AL132951-11|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Query: 164 YYNPSGGEKKVKHITYQLTTDIWSTNPSYCSKLVIQAYYFGTGS---KSVIKDLS 215
+ N + G+ V+ ++ D+W N CS + Y GTG+ KS +KD S
Sbjct: 403 FLNLNAGKVNVEQRVEEILRDLWQKNGDQCSTI-----YAGTGALDGKSKLKDAS 452
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 202 YFGTGSKSVIKDLSLIGRLIVPSTIPSYFLRPYGLINKGKY 242
Y S+ +D+ I +I P T+ Y P INKG+Y
Sbjct: 315 YQQVASRISPQDMRTIEFVITPITVAKYAATPIPTINKGEY 355
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/49 (24%), Positives = 26/49 (53%)
Query: 96 IGHAAIMTSDYWVLEMPGGDGWELGIPDNNRQVPKDQWFDMHASDWTTV 144
+ H+A++TS+ + G ++LG + N ++ Q F+ + + W V
Sbjct: 1031 LSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNV 1079
>U50068-8|AAB37739.1| 865|Caenorhabditis elegans Hypothetical
protein C01G5.8 protein.
Length = 865
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 117 WELGIPDNNRQVPKDQWFDMHASDWTTVYRCTDAEAAVMAARWADRTYYNPSGG 170
W+L + NR+ Q F M A D + ++C A ++ R Y N G
Sbjct: 755 WDLKHNETNRECSWKQ-FPMGAEDCVSFFQCIPRPALILILRRLAENYRNSRSG 807
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.137 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,542,638
Number of Sequences: 27539
Number of extensions: 283525
Number of successful extensions: 545
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 543
Number of HSP's gapped (non-prelim): 10
length of query: 242
length of database: 12,573,161
effective HSP length: 79
effective length of query: 163
effective length of database: 10,397,580
effective search space: 1694805540
effective search space used: 1694805540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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