Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001282-TA|BGIBMGA001282-PA|IPR000408|Regulator of
chromosome condensation, RCC1, IPR003439|ABC transporter related,
IPR001680|WD-40 repeat, IPR011048|Cytochrome cd1-nitrite
reductase-like, C-terminal haem d1
(531 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 60 4e-09
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 55 1e-07
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 54 3e-07
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 53 4e-07
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 52 1e-06
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 49 7e-06
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 47 3e-05
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 47 3e-05
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 47 3e-05
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 46 5e-05
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 46 6e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 46 6e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 8e-05
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 46 8e-05
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 45 1e-04
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 45 1e-04
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 45 1e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 45 1e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 44 2e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 44 3e-04
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 44 3e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 44 3e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 44 3e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 44 3e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 44 3e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 44 3e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 43 4e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 43 4e-04
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 43 4e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 43 4e-04
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 43 4e-04
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 43 6e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 43 6e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 8e-04
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 42 8e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 0.001
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 42 0.001
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 42 0.001
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 42 0.001
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 41 0.002
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 41 0.002
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 41 0.002
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 41 0.002
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 41 0.002
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 41 0.002
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 40 0.003
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 40 0.005
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 40 0.005
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 39 0.007
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 39 0.007
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 39 0.007
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 39 0.007
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 39 0.007
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 39 0.007
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 39 0.009
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 39 0.009
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 39 0.009
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 39 0.009
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 39 0.009
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 39 0.009
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 39 0.009
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 39 0.009
At1g22260.1 68414.m02782 expressed protein 39 0.009
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 39 0.009
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 38 0.013
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 38 0.013
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 38 0.013
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 38 0.013
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 38 0.013
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 38 0.013
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 38 0.017
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 38 0.017
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 38 0.017
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 38 0.017
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 38 0.022
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 37 0.029
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 37 0.029
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 37 0.038
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 37 0.038
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 37 0.038
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 37 0.038
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 37 0.038
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 37 0.038
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 36 0.051
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 36 0.051
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 36 0.051
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 36 0.051
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 36 0.051
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 36 0.067
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 36 0.067
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 36 0.067
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 36 0.067
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 35 0.12
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 35 0.12
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 35 0.12
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 35 0.12
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 35 0.12
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 35 0.15
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 35 0.15
At1g22275.1 68414.m02784 expressed protein 35 0.15
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 34 0.20
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 34 0.20
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 34 0.27
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.27
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 34 0.27
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 34 0.27
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 34 0.27
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 34 0.27
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.36
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 33 0.36
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 33 0.36
At5g05680.1 68418.m00625 nuclear pore complex protein-related co... 33 0.36
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.36
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.36
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 33 0.36
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 33 0.36
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 33 0.36
At2g28940.2 68415.m03518 protein kinase family protein contains ... 33 0.36
At2g28940.1 68415.m03517 protein kinase family protein contains ... 33 0.36
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.36
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 33 0.36
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 33 0.36
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.36
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 33 0.47
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 33 0.47
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 33 0.47
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 33 0.47
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 33 0.47
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 33 0.47
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 33 0.62
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 33 0.62
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 32 0.82
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 32 0.82
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 32 0.82
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 32 0.82
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 32 0.82
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 32 0.82
At3g23920.1 68416.m03005 beta-amylase, putative / 1,4-alpha-D-gl... 32 1.1
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 32 1.1
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 32 1.1
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 32 1.1
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 32 1.1
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 32 1.1
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 31 1.4
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 31 1.4
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 31 1.4
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 31 1.4
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 31 1.4
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 31 1.9
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 1.9
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 31 1.9
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 1.9
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 1.9
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 31 2.5
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 30 3.3
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 30 3.3
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 30 3.3
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 30 3.3
At2g20320.1 68415.m02373 DENN (AEX-3) domain-containing protein ... 30 3.3
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 30 3.3
At1g16120.1 68414.m01932 wall-associated kinase, putative contai... 30 3.3
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 30 4.4
At4g36990.1 68417.m05241 heat shock factor protein 4 (HSF4) / he... 30 4.4
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 30 4.4
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 30 4.4
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 29 5.8
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 29 5.8
At2g35350.1 68415.m04334 protein phosphatase 2C family protein /... 29 5.8
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 5.8
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 29 5.8
At3g54470.1 68416.m06026 uridine 5'-monophosphate synthase / UMP... 29 7.7
At2g39910.1 68415.m04905 expressed protein 29 7.7
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 29 7.7
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 29 7.7
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 60.1 bits (139), Expect = 4e-09
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL+GHK +F ++ D +++ S D TV++WA S G+C+ F+GH S L A++
Sbjct: 536 TLKGHKRRIFSVEFSTV-DQCVMTASGDKTVKIWAISDGSCLKTFEGH-TSSVLRASFIT 593
Query: 95 YPQLATKALSGGGDHTLRLWDMNDFPAEA-YDEN 127
T+ +S G D L+LW++N A YD++
Sbjct: 594 D---GTQFVSCGADGLLKLWNVNTSECIATYDQH 624
Score = 44.8 bits (101), Expect = 1e-04
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 36 LRGHKGTVF--EASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
L GHK V + + + L+++ S D TVR+W A+S +C+ V GH L A++
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNG-DILAVAFA 455
Query: 94 AYPQLATKALSGGGDHTLRLWDMN 117
+ + +SG GD TL++W ++
Sbjct: 456 --KKSFSFFVSGSGDRTLKVWSLD 477
Score = 41.9 bits (94), Expect = 0.001
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 20 GRSRKGDHGQLTTWKTLR---GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACV 76
G SR+ L T K +R GH+G V + + LL + +D V VW G C
Sbjct: 79 GHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDVDGGFCT 137
Query: 77 SVFDGHMAQSALGAAWSAYPQLATKAL-SGGGDHTLRLWDMN 117
F GH + ++ +P L SG D T+R+WD+N
Sbjct: 138 HYFRGH---KGVVSSILFHPDSNKNILISGSDDATVRVWDLN 176
Score = 34.3 bits (75), Expect = 0.20
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
T+ G T+ + +P D LL S +RVW + C+ + GH +G A A
Sbjct: 55 TIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDLETLKCIRSWKGHEG-PVMGMACHA 112
Query: 95 YPQLATKALSGGGDHTLRLWDMN 117
L A G D + +WD++
Sbjct: 113 SGGLLATA---GADRKVLVWDVD 132
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 55.2 bits (127), Expect = 1e-07
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 25 GDHGQLTTWK---TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG 81
G+ + WK TLRGH V + +W+P D +L S S D TV +W +G C +V G
Sbjct: 100 GEAPDVENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRTGMCTTVLRG 158
Query: 82 HMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMNDF 119
H++ G W + + S D T+ +W +D+
Sbjct: 159 HLS-LVKGVTWD---PIGSFIASQSDDKTVIIWRTSDW 192
Score = 37.1 bits (82), Expect = 0.029
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G TT LRGH V +W+P + S S D TV +W S DGH A+S
Sbjct: 150 GMCTT--VLRGHLSLVKGVTWDPI-GSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKS- 205
Query: 88 LGAAW 92
LG+ +
Sbjct: 206 LGSTF 210
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 53.6 bits (123), Expect = 3e-07
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+T + H V++A WNP H D+ S S D T+R+W + H + L W+
Sbjct: 143 RTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFE-ILSCDWN 201
Query: 94 AYPQ--LATKALSGGGDHTLRLWDMNDF 119
Y LAT ++ D T+++WD+ +
Sbjct: 202 KYDDCILATSSV----DKTVKVWDVRSY 225
Score = 49.2 bits (112), Expect = 7e-06
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
++ + H V +NP D L++S D TV++WA A V F H A A W+
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEH-AYCVYQAVWN 158
Query: 94 AYPQLATKALSGGGDHTLRLWDMND 118
P+ S GD TLR+WD+ +
Sbjct: 159 --PKHGDVFASASGDCTLRIWDVRE 181
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 43 VFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKA 102
V++ W+ HD +L++ D +V+++ + + + + P
Sbjct: 63 VYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSF 122
Query: 103 LSGGGDHTLRLWDMNDFPA 121
L+ D T++LW M D PA
Sbjct: 123 LTSSWDDTVKLWAM-DRPA 140
Score = 29.9 bits (64), Expect = 4.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSALGAAWSA 94
L GH V + ++PH L+ S S D +V +W A V +D H + A+G S
Sbjct: 232 LNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRYD-HHTEFAVGIDMSV 290
Query: 95 YPQLATKALSGGGDHTLRLWDMNDFP 120
+ S G D + +W P
Sbjct: 291 L--VEGLMASTGWDELVYVWQQGMDP 314
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 53.2 bits (122), Expect = 4e-07
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 17 DVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACV 76
D + R G GQ T RGH G V++ SW+ LLLS S D+T+++W +
Sbjct: 381 DKSVRLWNGITGQFVT--VFRGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLK 437
Query: 77 SVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLW 114
GH A WS P K +SGG D L+LW
Sbjct: 438 QDLPGH-ADEVFAVDWS--PD-GEKVVSGGKDRVLKLW 471
Score = 47.2 bits (107), Expect = 3e-05
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K L GH+ V ++P + S S D +VR+W +G V+VF GH+ +WS
Sbjct: 354 KRLTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWNGITGQFVTVFRGHVG-PVYQVSWS 411
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
A +L LSG D TL++W++
Sbjct: 412 ADSRL---LLSGSKDSTLKIWEI 431
Score = 30.3 bits (65), Expect = 3.3
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY 95
L GH V W D ++ + S D T+++W + G + GH W
Sbjct: 237 LSGHTLAVTCVKWGG--DGIIYTGSQDCTIKMWETTQGKLIRELKGH-------GHWINS 287
Query: 96 PQLATKAL--SGGGDHTLRLWDMNDFPAEAYD 125
L+T+ + +G DHT R + N+ +A +
Sbjct: 288 LALSTEYVLRTGAFDHTGRQYPPNEEKQKALE 319
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+T+ GH V S++P L S S D TVR+W + + GH L AWS
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLA-SGSGDTTVRLWDLYTETPLFTCKGH-KNWVLTVAWS 160
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 36 LRGHKGTVFEASWNPHHDD----LLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAA 91
L GHK + SW P H +++S D R+W + + GH +
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGH-TLAVTCVK 248
Query: 92 WSAYPQLATKALSGGGDHTLRLWD 115
W + T G D T+++W+
Sbjct: 249 WGGDGIIYT----GSQDCTIKMWE 268
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 52.0 bits (119), Expect = 1e-06
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 18 VTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVS 77
V G R D T K+L GH +V E P L+++ S D +VR+W +G C+
Sbjct: 106 VKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICIL 165
Query: 78 VFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMNDF 119
+F G + +P + S G D T+++W M +F
Sbjct: 166 IFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEF 207
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 49.2 bits (112), Expect = 7e-06
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
RGH G V + SW+ D+ LLS S D TVR+W S C+ VF A ++ + P
Sbjct: 325 RGHTGEVLDISWSK--DNYLLSASMDKTVRLWKVGSNDCLGVF----AHNSYVTSVQFNP 378
Query: 97 QLATKALSGGGDHTLRLWDMN 117
+SG D +R+W+++
Sbjct: 379 VNENYFMSGSIDGKVRIWNIS 399
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 47.2 bits (107), Expect = 3e-05
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGAC 75
L+GH +V + W+P H DL+ + S D +VR+W A SG C
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKC 101
Score = 33.9 bits (74), Expect = 0.27
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFD----GHMAQSALGAAW 92
+GHK V +WN + L S S D T R+W D GH S W
Sbjct: 17 QGHKKKVHSVAWNSNGTKLA-SGSVDQTARIWNIEPHGHSKAKDLELKGH-TDSVDQLCW 74
Query: 93 SAYPQLATKALSGGGDHTLRLWD 115
P+ + + GD ++RLWD
Sbjct: 75 D--PKHSDLVATASGDKSVRLWD 95
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 47.2 bits (107), Expect = 3e-05
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
RGH+G + + + + ++ + S S+D +RVW G VSV GH + A+S P
Sbjct: 284 RGHEGDITDLAVSSNNI-FIASASNDCVIRVWRLPDGLPVSVLRGHTG-AVTAIAFSPRP 341
Query: 97 QLATKALSGGGDHTLRLWD 115
+ LS D T R+WD
Sbjct: 342 GSPYQLLSSSDDGTCRIWD 360
Score = 33.9 bits (74), Expect = 0.27
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
+L+ D + VW AS G+ V GH A + + P++ A+S G D +WD
Sbjct: 559 VLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRI---AMSAGYDGKTIVWD 615
Query: 116 M-NDFPAEAYD 125
+ P + YD
Sbjct: 616 IWEGIPIQIYD 626
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K LRGH+ V+ A + +++ S D V+VW+ + C++ GH A S
Sbjct: 239 KRLRGHRNAVYCAILD-RSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSS 297
Query: 94 AYPQLATKALSGGGDHTLRLWDMND 118
+A S D +R+W + D
Sbjct: 298 NNIFIA----SASNDCVIRVWRLPD 318
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 36 LRGHKGTVFEASWNPHHDD--LLLSTSSDATVRVWAA 70
LRGH G V +++P LLS+S D T R+W A
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDA 361
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 47.2 bits (107), Expect = 3e-05
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSALGAAWSAY 95
RGH G + + SW+ LLS+S D TVR+W SS C+ VF + + +
Sbjct: 360 RGHTGEILDLSWS--EKGFLLSSSVDETVRLWRVGSSDECIRVF----SHKSFVTCVAFN 413
Query: 96 PQLATKALSGGGDHTLRLWDMNDFPAEAYDE 126
P +SG D +R+WD++ F Y +
Sbjct: 414 PVDDNYFISGSIDGKVRIWDVSQFRVVDYTD 444
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSAL 88
HK V ++NP D+ +S S D VR+W S V D +AL
Sbjct: 403 HKSFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTAL 452
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 46.4 bits (105), Expect = 5e-05
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY 95
LR G + + W+P+ + + + SSD TVR+W +G CV +F GH + L A S
Sbjct: 495 LRIMAGHLSDVDWHPNCN-YIATGSSDKTVRLWDVQTGECVRIFIGHRSM-VLSLAMS-- 550
Query: 96 PQLATKALSGGGDHTLRLWDMN 117
P A SG D T+ +WD++
Sbjct: 551 PDGRYMA-SGDEDGTIMMWDLS 571
Score = 45.6 bits (103), Expect = 8e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 25 GDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMA 84
G +G+ ++ L GH G V+ A+++P D +LS+S+D T+R+W+ A + + GH
Sbjct: 404 GPNGR-RSYTLLLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANLVCYKGHNY 461
Query: 85 QSALGAAWSA-YPQLATKALSGGGDHTLRLWDMN 117
W A + S D T R+W M+
Sbjct: 462 -----PVWDAQFSPFGHYFASCSHDRTARIWSMD 490
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS-AYP 96
GH+ V + +P + S D T+ +W S+ C++ GH + WS +Y
Sbjct: 539 GHRSMVLSLAMSPD-GRYMASGDEDGTIMMWDLSTARCITPLMGHNS-----CVWSLSYS 592
Query: 97 QLATKALSGGGDHTLRLWDM 116
+ SG D T++LWD+
Sbjct: 593 GEGSLLASGSADCTVKLWDV 612
Score = 35.5 bits (78), Expect = 0.088
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH V++A ++P S S D T R+W+ + + GH++ W +P
Sbjct: 457 KGHNYPVWDAQFSPF-GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD----VDW--HP 509
Query: 97 QLATKALSGGGDHTLRLWDM 116
+G D T+RLWD+
Sbjct: 510 N-CNYIATGSSDKTVRLWDV 528
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 46.0 bits (104), Expect = 6e-05
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K LRGH VF ++NP +L++S S D T+R+W +G CV + H ++ +
Sbjct: 122 KVLRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKTGKCVRMIKAH----SMPISSV 176
Query: 94 AYPQLATKALSGGGDHTLRLWDMND 118
+ + + +S D + ++WD +
Sbjct: 177 HFNRDGSLIVSASHDGSCKIWDAKE 201
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
KTL GH + ++ + +LL S S D T+ +W+A++ + + ++GH + AWS
Sbjct: 37 KTLEGHTAAISCVKFS-NDGNLLASASVDKTMILWSATNYSLIHRYEGH-SSGISDLAWS 94
Query: 94 AYPQLATKALSGGGDHTLRLWD 115
+ S D TLR+WD
Sbjct: 95 SDSHY---TCSASDDCTLRIWD 113
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSALGAAWSAYP 96
GH + + +W+ S S D T+R+W A S C+ V GH ++
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIWDARSPYECLKVLRGH-TNFVFCVNFNPPS 140
Query: 97 QLATKALSGGGDHTLRLWDM 116
L +SG D T+R+W++
Sbjct: 141 NL---IVSGSFDETIRIWEV 157
Score = 29.1 bits (62), Expect = 7.7
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 20 GRSRKGDHGQLTTWKTLRGHKG-TVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSV 78
G + D + T KTL K V A ++P+ +L++T D+T+++ ++G + V
Sbjct: 192 GSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATL-DSTLKLSNYATGKFLKV 250
Query: 79 FDGHMAQSALGAAWSAYPQLATK-ALSGGGDHTLRLWDM 116
+ GH + + SA+ K +SG D+ + LWD+
Sbjct: 251 YTGH--TNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 46.0 bits (104), Expect = 6e-05
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW------AASSGACVSVFDGHMAQSA 87
K + H + WNPH D+L+L+ S+D TVR++ A G+ + F+GH A +
Sbjct: 331 KVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKA-AV 389
Query: 88 LGAAWSAYPQLATKALSGGGDHTLRLWD 115
L WS P ++ S D L +WD
Sbjct: 390 LCVQWS--PDKSSVFGSSAEDGLLNIWD 415
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA--CVSVFDGHMAQSALGAAWSAY 95
GH+ TV + +++P S D+ + +W A +G V H A W+
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHC-VDWN-- 346
Query: 96 PQLATKALSGGGDHTLRLWDMNDFPA 121
P L+G D+T+RL+D A
Sbjct: 347 PHDDNLILTGSADNTVRLFDRRKLTA 372
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 45.6 bits (103), Expect = 8e-05
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 27 HGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQS 86
HG + L+GHK + + W ++S S D TVR W +G + H +
Sbjct: 83 HGDCKNFMVLKGHKNAILDLHWTSDGSQ-IVSASPDKTVRAWDVETGKQIKKMAEHSSFV 141
Query: 87 ALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
P L +SG D T +LWDM
Sbjct: 142 NSCCPTRRGPPL---IISGSDDGTAKLWDM 168
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 55 LLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLW 114
L++S S D T ++W + F +A+ ++ A K +GG D+ +++W
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAV-----SFSDAADKIFTGGVDNDVKVW 207
Query: 115 DM 116
D+
Sbjct: 208 DL 209
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 45.6 bits (103), Expect = 8e-05
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 23 RKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGH 82
+K H + T ++ L GH G V + +W+ +LLLS S D TVR+W C+ VF +
Sbjct: 255 QKAFHIEETPFQELYGHTGDVLDLAWSD--SNLLLSASKDKTVRLWRTGCDQCLHVFHHN 312
Query: 83 MAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMND 118
+ + P SG D R+W +++
Sbjct: 313 NYVTCV----EFNPVNKNNFASGSIDGKARIWGLSE 344
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
RGH+G + + + + ++ L+ S S+D +RVW G +SV GH + A+S
Sbjct: 344 RGHEGDITDLAVSSNNA-LVASASNDFVIRVWRLPDGMPISVLRGHTG-AVTAIAFSPRQ 401
Query: 97 QLATKALSGGGDHTLRLWD 115
+ LS D T R+WD
Sbjct: 402 ASVYQLLSSSDDGTCRIWD 420
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K LRGH+ V+ A ++ +++ S D V++W+ + C++ GH A S
Sbjct: 299 KKLRGHRNAVYCAIFD-RSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 94 AYPQLATKALSGGGDHTLRLWDMND 118
+A S D +R+W + D
Sbjct: 358 NNALVA----SASNDFVIRVWRLPD 378
Score = 33.1 bits (72), Expect = 0.47
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 36 LRGHKGTVFEASWNPHHDDL--LLSTSSDATVRVWAA 70
LRGH G V +++P + LLS+S D T R+W A
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDA 421
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
+L+ D + VW A+ G+ V GH S + P++ A+S G D +WD
Sbjct: 612 VLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRI---AMSAGYDGKTIIWD 668
Query: 116 M-NDFPAEAYD 125
+ P + Y+
Sbjct: 669 IWEGIPIKVYE 679
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 45.2 bits (102), Expect = 1e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K L GH+ T + ++P H +++ S S D VR+W A +G C+ D + +++ A+
Sbjct: 139 KILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRTHDFYRPIASI--AFH 196
Query: 94 AYPQLATKALSGGGDHTLRLWDMN 117
A +L A SG H L +W N
Sbjct: 197 AGGELLAVA-SG---HKLHIWHYN 216
Score = 33.9 bits (74), Expect = 0.27
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA--YPQLATKALSGGGDHTLRL 113
L ST D TV++ +G C+ + GH W +P+ + SG DH +RL
Sbjct: 118 LASTHGDHTVKIIDCETGKCLKILTGHRR-----TPWVVRFHPRHSEIVASGSLDHEVRL 172
Query: 114 WD 115
W+
Sbjct: 173 WN 174
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 45.2 bits (102), Expect = 1e-04
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K L GH+ T + ++P H +++ S S D VR+W A +G C+ D + +++ A+
Sbjct: 139 KILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTGECIRTHDFYRPIASI--AFH 196
Query: 94 AYPQLATKALSGGGDHTLRLWDMN 117
A +L A SG H L +W N
Sbjct: 197 AGGELLAVA-SG---HKLHIWHYN 216
Score = 33.9 bits (74), Expect = 0.27
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA--YPQLATKALSGGGDHTLRL 113
L ST D TV++ +G C+ + GH W +P+ + SG DH +RL
Sbjct: 118 LASTHGDHTVKIIDCETGKCLKILTGHRR-----TPWVVRFHPRHSEIVASGSLDHEVRL 172
Query: 114 WD 115
W+
Sbjct: 173 WN 174
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 44.8 bits (101), Expect = 1e-04
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW------AASSGACVSVFDG 81
G K + H + WNPH ++L+L+ S+D TVRV+ + G+ V F+G
Sbjct: 314 GTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEG 373
Query: 82 HMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
H A + L WS P ++ S D L +WD
Sbjct: 374 HRA-AVLCVQWS--PDKSSVFGSSAEDGLLNIWD 404
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA--CVSVFDGHMAQSALGAAWSAY 95
GHK TV + ++ P S D+ + +W A +G + V H A W+
Sbjct: 279 GHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHC-VDWN-- 335
Query: 96 PQLATKALSGGGDHTLRLWD 115
P L+G D+T+R++D
Sbjct: 336 PHDNNLILTGSADNTVRVFD 355
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 44.4 bits (100), Expect = 2e-04
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQL 98
H +F+ SW D LL+ S D T++VW C V GH + + ++P
Sbjct: 127 HYNAIFDISWIKG-DSCLLTASGDQTIKVWDVEENKCTGVLIGH---TGTVKSMCSHPTN 182
Query: 99 ATKALSGGGDHTLRLWDM 116
+ +SG D LWD+
Sbjct: 183 SDLLVSGSRDGCFALWDL 200
Score = 32.3 bits (70), Expect = 0.82
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVS 77
L+GH V W+P + + S D TVR+W + C +
Sbjct: 377 LKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNICTN 418
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
L GH GTV +P + DLL+S S D +W
Sbjct: 166 LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALW 198
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 44.0 bits (99), Expect = 3e-04
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G + + L GH+G V + P+ D L+++S D T +W ++G SVF G
Sbjct: 144 GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGH 203
Query: 88 LGAAWSAYPQLATKA--LSGGGDHTLRLWD 115
S + +SG D T RLWD
Sbjct: 204 TADVLSVSISGSNPNWFISGSCDSTARLWD 233
Score = 33.9 bits (74), Expect = 0.27
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 30 LTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAA 70
L +TL+GH G V+ W P + ++S S D + VW A
Sbjct: 55 LVCCRTLQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNA 94
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 4 LMTRVGDKDANRTDVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDA 63
L+T GD+ DVT + G + GH V S + + + +S S D+
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGG----EFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 64 TVRVW-AASSGACVSVFDGH 82
T R+W ++ V F GH
Sbjct: 228 TARLWDTRAASRAVRTFHGH 247
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 44.0 bits (99), Expect = 3e-04
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G + + L GH+G V + P+ D L+++S D T +W ++G SVF G
Sbjct: 82 GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGH 141
Query: 88 LGAAWSAYPQLATKA--LSGGGDHTLRLWD 115
S + +SG D T RLWD
Sbjct: 142 TADVLSVSISGSNPNWFISGSCDSTARLWD 171
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 4 LMTRVGDKDANRTDVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDA 63
L+T GD+ DVT + G + GH V S + + + +S S D+
Sbjct: 110 LITSSGDQTCILWDVTTGLKTSVFGG----EFQSGHTADVLSVSISGSNPNWFISGSCDS 165
Query: 64 TVRVW-AASSGACVSVFDGH 82
T R+W ++ V F GH
Sbjct: 166 TARLWDTRAASRAVRTFHGH 185
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 44.0 bits (99), Expect = 3e-04
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G + + L GH+G V + P+ D L+++S D T +W ++G SVF G
Sbjct: 144 GTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGH 203
Query: 88 LGAAWSAYPQLATKA--LSGGGDHTLRLWD 115
S + +SG D T RLWD
Sbjct: 204 TADVLSVSISGSNPNWFISGSCDSTARLWD 233
Score = 33.9 bits (74), Expect = 0.27
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 30 LTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAA 70
L +TL+GH G V+ W P + ++S S D + VW A
Sbjct: 55 LVCCRTLQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNA 94
Score = 29.1 bits (62), Expect = 7.7
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 4 LMTRVGDKDANRTDVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDA 63
L+T GD+ DVT + G + GH V S + + + +S S D+
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGG----EFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 64 TVRVW-AASSGACVSVFDGH 82
T R+W ++ V F GH
Sbjct: 228 TARLWDTRAASRAVRTFHGH 247
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 44.0 bits (99), Expect = 3e-04
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY-PQ 97
H +V +WN ++L S S+D V+VW ++G C + H + AW+ Y P+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITME-HHTKEVQAVAWNHYAPE 290
Query: 98 LATKALSGGGDHTLRLWD 115
+ LSG D T+ L D
Sbjct: 291 V---LLSGSFDQTVVLKD 305
Score = 32.3 bits (70), Expect = 0.82
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG--ACVSVFDGHMAQSALGAAW 92
T+ GH S+N +LL + S D TV++W S+ +C++ + + A A+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPN-AGGLFFIAF 422
Query: 93 SAYPQLATKALSGGGDHTLRLWD 115
S P GG L+LWD
Sbjct: 423 S--PDNPFLLAMGGVMGELKLWD 443
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 48 WNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA--YPQLATKALSG 105
WN + + L ST D V++W A +G S + H + AWS P TK +SG
Sbjct: 773 WNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKR-----AWSVDFSPSDPTKFVSG 827
Query: 106 GGDHTLRLWDMND 118
D +++LW +N+
Sbjct: 828 SDDCSVKLWSINE 840
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 44.0 bits (99), Expect = 3e-04
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
+L+GH + + SW+ LLLS+S D TVR+W + C+ +F A +
Sbjct: 501 SLKGHLDAILDLSWSK--SQLLLSSSMDKTVRLWDIETKTCLKLF----AHNDYVTCIQF 554
Query: 95 YPQLATKALSGGGDHTLRLWDMND 118
P LSG D +R+W + D
Sbjct: 555 SPVDENYFLSGSLDAKIRIWSIQD 578
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 43.6 bits (98), Expect = 3e-04
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+T GH V ++P DDL+ S +D +R W+ ++G+C V+ G Q
Sbjct: 730 RTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQ 781
Score = 35.9 bits (79), Expect = 0.067
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSS-DATVRVW-AASSGACVSVFDGHMAQSALGAAW 92
TL H + + ++P L L+TSS D TVRVW A + G + F GH S++ +
Sbjct: 688 TLEEHTAMITDIRFSP--SQLRLATSSFDKTVRVWDADNKGYSLRTFMGH---SSMVTSL 742
Query: 93 SAYPQLATKALSGGGDHTLRLWDMND 118
+P S D+ +R W +N+
Sbjct: 743 DFHPIKDDLICSCDNDNEIRYWSINN 768
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 43.2 bits (97), Expect = 4e-04
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 QLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFD-GHMAQSA 87
+L+ + L GH+G V +WN + LL+S S D + +W SS + D GH A
Sbjct: 39 RLSQEQELEGHQGCVNALAWNSN-GSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIF 97
Query: 88 LGAAWSAYPQLATK-ALSGGGDHTLRLWDMNDFPAEAYDEN 127
P+ + + +SG GD +RL++ + A D+N
Sbjct: 98 ---CTKFVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDN 135
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 43.2 bits (97), Expect = 4e-04
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY-PQ 97
H +V +WN ++L S S+D V+VW ++G C + H + AW+ Y P+
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITME-HHTKEVQAVAWNHYAPE 322
Query: 98 LATKALSGGGDHTLRLWD 115
+ LSG D T+ + D
Sbjct: 323 V---LLSGSFDQTVVMKD 337
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 43.2 bits (97), Expect = 4e-04
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGH 82
KTL GH F ++NP ++++S S D TVR+W ++G C+ V H
Sbjct: 107 KTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTTGKCLKVLPAH 154
Score = 36.3 bits (80), Expect = 0.051
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 48 WNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHM-AQSALGAAWSAYPQLATKALSGG 106
++P+ +L+ T D T+R+W SS + + GH+ AQ + +A+S + +SG
Sbjct: 206 FSPNGKFILVGTL-DNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV--TNGKRIVSGS 262
Query: 107 GDHTLRLWDMN 117
D+ + +W++N
Sbjct: 263 EDNCVHMWELN 273
Score = 35.1 bits (77), Expect = 0.12
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH+ + + +++ ++S S D T+++W +G+ + GH + + PQ
Sbjct: 69 GHENGISDVAFSSDAR-FIVSASDDKTLKLWDVETGSLIKTLIGH---TNYAFCVNFNPQ 124
Query: 98 LATKALSGGGDHTLRLWDM 116
+ +SG D T+R+WD+
Sbjct: 125 -SNMIVSGSFDETVRIWDV 142
Score = 33.1 bits (72), Expect = 0.47
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K L H V +N L++S+S D R+W + +G CV + ++
Sbjct: 149 KVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIWDSGTGHCVKTL---IDDENPPVSFV 204
Query: 94 AYPQLATKALSGGGDHTLRLWDMN 117
+ L G D+TLRLW+++
Sbjct: 205 RFSPNGKFILVGTLDNTLRLWNIS 228
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
L GH TV + +P ++L+ S S D TVR+W
Sbjct: 281 LEGHTETVMNVACHPT-ENLIASGSLDKTVRIW 312
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 43.2 bits (97), Expect = 4e-04
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA- 94
++GH+ + +N + DLL S + D T VW A +G + + GH GA W
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFADNGERLGTYRGHS-----GAVWCCD 86
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
+ +++ ++G D T +LWD+
Sbjct: 87 ISRDSSRLITGSADQTAKLWDV 108
Score = 35.5 bits (78), Expect = 0.088
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 40 KGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMA-QSALGAAWSAYPQL 98
K + A W P + ++ S DA +R+W A +G + D + + A+ + A
Sbjct: 175 KKKINRAVWGPLNQTIV-SGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADD- 232
Query: 99 ATKALSGGGDHTLRLWDM 116
+ L+G D T +LWDM
Sbjct: 233 -SHFLTGSHDKTAKLWDM 249
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 43.2 bits (97), Expect = 4e-04
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 18 VTGRSRKGDHGQLT-TWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACV 76
++G ++ + Q+T T L+ HK + ++P DD L + S+D T ++W + G +
Sbjct: 275 LSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPV-DDCLATASADRTAKLW-KTDGTLL 332
Query: 77 SVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMN 117
F+GH+ + A A + L T + D T RLWD+N
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSY----DKTWRLWDIN 369
Score = 38.3 bits (85), Expect = 0.013
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 31 TTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGA 90
T +T GH + +++P L +TS D T R+W ++GA + + +GH ++S G
Sbjct: 330 TLLQTFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDINTGAELLLQEGH-SRSVYGI 387
Query: 91 AWSAYPQLATKALSGGGDHTLRLWDM 116
A+ Q A S G D R+WD+
Sbjct: 388 ---AFQQDGALAASCGLDSLARVWDL 410
Score = 34.3 bits (75), Expect = 0.20
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH +V+ ++ L S D+ RVW +G + VF GH+ + +S P
Sbjct: 379 GHSRSVYGIAFQ-QDGALAASCGLDSLARVWDLRTGRSILVFQGHI-KPVFSVNFS--PN 434
Query: 98 LATKALSGGGDHTLRLWDM 116
SGG D+ R+WD+
Sbjct: 435 -GYHLASGGEDNQCRIWDL 452
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 42.7 bits (96), Expect = 6e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGA-AW 92
K L GH+ T + ++PHH +++ S S D VR+W ++ C+ H+ + + A+
Sbjct: 142 KVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTSECIR---SHLFYRPIASIAF 198
Query: 93 SAYPQLATKALSGGGDHTLRLWDMN 117
A +L A SG H L +W N
Sbjct: 199 HAEGELLAVA-SG---HKLHMWHYN 219
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA--YPQLATKALSGGGDHTLRL 113
L ST D TV++ +G C+ V GH W +P + SG D +RL
Sbjct: 121 LASTHGDHTVKIIDCETGNCLKVLTGHRR-----TPWVVRFHPHHSEIVASGSLDLEVRL 175
Query: 114 WD 115
W+
Sbjct: 176 WN 177
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 42.7 bits (96), Expect = 6e-04
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL GH + ++ H + ++S S D T+R+W S C+SV GH + A++
Sbjct: 88 TLLGHLDYIRTVQFH-HENPWIVSASDDQTIRIWNWQSRTCISVLTGH-NHYVMCASFHP 145
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
L +S D T+R+WD+
Sbjct: 146 KEDL---VVSASLDQTVRVWDI 164
Score = 33.1 bits (72), Expect = 0.47
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVF 79
TLRGH V ++ D +++S S D ++RVW A+ + F
Sbjct: 243 TLRGHMNNVSSVMFHAKQD-IIVSNSEDKSIRVWDATKRTGIQTF 286
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 42.3 bits (95), Expect = 8e-04
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASS 72
L GH V+ +WNP D ++ S S+D TVR+W SS
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA-----CVSVFDGHMAQSALGA 90
LRGH+ V SWN LL + D +V +W ++V GH ++
Sbjct: 88 LRGHESEVKSVSWNA-SGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGH-SEDVKMV 145
Query: 91 AWSAYPQLATKALSGGGDHTLRLWDMND 118
W +P + S D+T+++W D
Sbjct: 146 LW--HPTMDV-LFSCSYDNTIKIWCSED 170
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 42.3 bits (95), Expect = 8e-04
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 27 HGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQS 86
H ++ L+GH G V +++P ++ + S+D T+++W ++G GH+ Q
Sbjct: 157 HAPWKNYRVLQGHLGWVRSVAFDPSNE-WFCTGSADRTIKIWDVATGVLKLTLTGHIGQ- 214
Query: 87 ALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
G A S T S G D ++ WD+
Sbjct: 215 VRGLAVS---NRHTYMFSAGDDKQVKCWDL 241
Score = 33.1 bits (72), Expect = 0.47
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL GH G V + + H + S D V+ W + + GH+ G A
Sbjct: 207 TLTGHIGQVRGLAVSNRHT-YMFSAGDDKQVKCWDLEQNKVIRSYHGHLH----GVYCLA 261
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
L+GG D R+WD+
Sbjct: 262 LHPTLDVVLTGGRDSVCRVWDI 283
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 29 QLTTWKTLRGHKGTVFEASWNP---HHDD---LLLSTSSDATVRVWAAS----SGACVSV 78
+L + L GH V+ +WNP H D +L S S D TVR+W S S C +V
Sbjct: 9 ELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTV 68
Query: 79 FDGHMAQSALGAAWSAYPQ-LATKALSG 105
+ ++ AWS Q LAT + G
Sbjct: 69 LEETHTRTVRSCAWSPSGQLLATASFDG 96
Score = 36.3 bits (80), Expect = 0.051
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG---ACVSVFDGHMAQSALGAA 91
TL GH+ V SWN L + S D +V +W G C +V GH Q
Sbjct: 113 TLEGHENEVKSVSWNA-SGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGH-TQDVKMVQ 170
Query: 92 WSAYPQLATKALSGGGDHTLRLWDMNDFPAE 122
W +P + S D+T+++W D E
Sbjct: 171 W--HPTMDV-LFSCSYDNTIKVWWSEDDDGE 198
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSALGAAW 92
++ RGH V +W+P H++ +S SSD ++ W + + + H S AW
Sbjct: 346 QSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAH-DNSVWDLAW 404
Query: 93 SAYPQLATKALSGGGDHTLRLWDMN 117
+P + SG DHT + W N
Sbjct: 405 --HP-IGYLLCSGSNDHTTKFWCRN 426
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
+L GHK V WN + + LL+ S D ++++ + + F GH + AW
Sbjct: 305 SLHGHKNIVLSVKWN-QNGNWLLTASKDQIIKLYDIRTMKELQSFRGH-TKDVTSLAW-- 360
Query: 95 YPQLATKALSGGGDHTLRLW 114
+P +SG D ++ W
Sbjct: 361 HPCHEEYFVSGSSDGSICHW 380
Score = 32.3 bits (70), Expect = 0.82
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V W+P LL+S D V++W SG + GH L W+ Q
Sbjct: 266 GHGWDVKSVDWHPTKS-LLVSGGKDQLVKLWDTRSGRELCSLHGH-KNIVLSVKWN---Q 320
Query: 98 LATKALSGGGDHTLRLWDM 116
L+ D ++L+D+
Sbjct: 321 NGNWLLTASKDQIIKLYDI 339
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G ++ TL GH V W+P D +L+ ++ +R W SG CV +++ S
Sbjct: 307 GHISLKHTLVGHHKPVIAILWSPD-DRQVLTCGAEEVIRRWDVDSGDCVHMYE-KGGISP 364
Query: 88 LGAAWSAYPQLATKALSGGGDHTLRLWDMNDFPAEAY 124
+ W YP ++G D ++ +WD++ E +
Sbjct: 365 ISCGW--YPD-GQGIIAGMTDRSICMWDLDGREKECW 398
Score = 36.7 bits (81), Expect = 0.038
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
L GH G V SW+P + +L S S D T+R+W
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 37 RGHKGTVF--EASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
+GHK + F + + + + S S D+ V +W S+G + GH A + +WS
Sbjct: 483 KGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGH-AGAVNCVSWS- 540
Query: 95 YPQLATKALSGGGDHTLRLWDMN 117
P S D T+R+W ++
Sbjct: 541 -PTNLHMLASASDDGTIRIWGLD 562
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 41.5 bits (93), Expect = 0.001
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL GH + ++ H ++S S D T+R+W S CVSV GH + A++
Sbjct: 88 TLLGHLDYIRTVQFH-HEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH-NHYVMCASFHP 145
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
L +S D T+R+WD+
Sbjct: 146 KEDL---VVSASLDQTVRVWDI 164
Score = 32.3 bits (70), Expect = 0.82
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVF 79
TLRGH V ++ D +++S S D ++RVW A+ + F
Sbjct: 243 TLRGHMNNVSSVMFHAKQD-IIVSNSEDKSIRVWDATKRTGLQTF 286
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQL 98
H+G V ++ + L +S D ++VW + C+ GH+ YP +
Sbjct: 50 HEGPVRGVHFH-NSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWI 108
Query: 99 ATKALSGGGDHTLRLWD 115
+S D T+R+W+
Sbjct: 109 ----VSASDDQTIRIWN 121
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 27 HGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQS 86
H ++ ++GH G V +++P ++ + S+D T+++W ++G GH+ Q
Sbjct: 163 HAPWKNYRVIQGHLGWVRSVAFDPSNE-WFCTGSADRTIKIWDVATGVLKLTLTGHIEQ- 220
Query: 87 ALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
G A S T S G D ++ WD+
Sbjct: 221 VRGLAVS---NRHTYMFSAGDDKQVKCWDL 247
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
++ GH V+ + +P D +LL+ D+ RVW + + GH
Sbjct: 254 RSYHGHLSGVYCLALHPTLD-VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
PQ+ T G D T++ WD+
Sbjct: 313 TDPQVVT----GSHDTTIKFWDL 331
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA- 94
++GH+ + +N DLL S + D T +W A +G + + GH GA W
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGERLGTYRGHN-----GAVWCCD 59
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
+ +++ ++G D T +LWD+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDV 81
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 40 KGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA-LGAAWSAYPQL 98
K + A W P + ++ S D +R+W A +G + D + + + A
Sbjct: 148 KKRINRAVWGPLNQTIV-SGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADD- 205
Query: 99 ATKALSGGGDHTLRLWDM 116
+ L+G D T +LWDM
Sbjct: 206 -SHFLTGSLDKTAKLWDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA- 94
++GH+ + +N DLL S + D T +W A +G + + GH GA W
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGERLGTYRGHN-----GAVWCCD 59
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
+ +++ ++G D T +LWD+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDV 81
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 40 KGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA-LGAAWSAYPQL 98
K + A W P + ++ S D +R+W A +G + D + + + A
Sbjct: 148 KKRINRAVWGPLNQTIV-SGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADD- 205
Query: 99 ATKALSGGGDHTLRLWDM 116
+ L+G D T +LWDM
Sbjct: 206 -SHFLTGSLDKTAKLWDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA- 94
++GH+ + +N DLL S + D T +W A +G + + GH GA W
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFADNGERLGTYRGHN-----GAVWCCD 59
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
+ +++ ++G D T +LWD+
Sbjct: 60 VSRDSSRLITGSADQTAKLWDV 81
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 40 KGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA-LGAAWSAYPQL 98
K + A W P + ++ S D +R+W A +G + D + + + A
Sbjct: 148 KKRINRAVWGPLNQTIV-SGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADD- 205
Query: 99 ATKALSGGGDHTLRLWDM 116
+ L+G D T +LWDM
Sbjct: 206 -SHFLTGSLDKTAKLWDM 222
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+ GH+ ++P + L S SSDA +++W C+ + GH + G +
Sbjct: 94 RAFTGHRSNCSAVEFHPF-GEFLASGSSDANLKIWDIRKKGCIQTYKGH----SRGISTI 148
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
+ +SGG D+ +++WD+
Sbjct: 149 RFTPDGRWVVSGGLDNVVKVWDL 171
Score = 34.3 bits (75), Expect = 0.20
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G+ T+ +L GH V +++ + L+L+ +S +++W V F GH +
Sbjct: 46 GKPTSLMSLCGHTSAVDSVAFDSA-EVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNC- 103
Query: 88 LGAAWSAYPQLATKALSGGGDHTLRLWDM 116
+A +P SG D L++WD+
Sbjct: 104 --SAVEFHP-FGEFLASGSSDANLKIWDI 129
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 41.1 bits (92), Expect = 0.002
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+ GH+ ++P + L S SSD +RVW C+ + GH G +
Sbjct: 43 RAFTGHRSNCSAVEFHPF-GEFLASGSSDTNLRVWDTRKKGCIQTYKGH----TRGISTI 97
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
+ +SGG D+ +++WD+
Sbjct: 98 EFSPDGRWVVSGGLDNVVKVWDL 120
Score = 33.9 bits (74), Expect = 0.27
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
+L GH V ++N + L+L+ +S +++W V F GH + +A
Sbjct: 2 SLCGHTSPVDSVAFNSE-EVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNC---SAVEF 57
Query: 95 YPQLATKALSGGGDHTLRLWD 115
+P SG D LR+WD
Sbjct: 58 HP-FGEFLASGSSDTNLRVWD 77
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V + SW+ LLS+S D TVR+W SS C+ VF + S P
Sbjct: 466 GHLDDVLDLSWSKSQH--LLSSSMDKTVRLWDLSSKTCLKVF----SHSDYVTCIQFNPV 519
Query: 98 LATKALSGGGDHTLRLWDMND 118
+SG D +R+W + D
Sbjct: 520 DDNYFISGSLDAKVRIWSIPD 540
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 39.5 bits (88), Expect = 0.005
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 34 KTLRGHKGTVFEA-SWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAW 92
+TL H V W D LLS S D TV++WAA G + V H + + A
Sbjct: 308 QTLTDHSSVVMSLICW----DQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALC 363
Query: 93 SAYPQLATKA-LSGGGDHTLRLWDMNDF 119
+ A L D+TLRL+D+ F
Sbjct: 364 GVHDAEAKPVLLCACNDNTLRLYDLPSF 391
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 24 KGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSV 78
KG+ L T L GH+ V + P D L + S D T+RVW +SG C V
Sbjct: 137 KGESFALLT--QLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVWDCASGQCTGV 188
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 39.5 bits (88), Expect = 0.005
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V + SW+ LLLS+S D TVR+W + +C+ +F A + P
Sbjct: 517 GHLDDVLDLSWS--RSQLLLSSSMDKTVRLWDIETQSCLKLF----AHNDYVTCVQFNPL 570
Query: 98 LATKALSGGGDHTLRLWDMND 118
+SG D +R+W++++
Sbjct: 571 DEDYFISGSLDAKIRIWNISN 591
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
+ L GH TV SWNP + +L S S D T+R+W
Sbjct: 479 EVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 48 WNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA--YPQLATKALSG 105
WN + + L S+ D V++W ++G +S F H + AWS TK SG
Sbjct: 761 WNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKR-----AWSVDFSEACPTKLASG 815
Query: 106 GGDHTLRLWDMND 118
D +++LW++N+
Sbjct: 816 SDDCSVKLWNINE 828
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 39.1 bits (87), Expect = 0.007
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
+ +GH V + +W+ LLS+S D TVR+W SS C+ VF + S
Sbjct: 508 SFQGHVDDVLDLAWSKSQH--LLSSSMDKTVRLWNLSSQTCLKVF----SHSDYVTCIQF 561
Query: 95 YPQLATKALSGGGDHTLRLWDMND 118
P +SG D +R+W + D
Sbjct: 562 NPVDDRYFISGSLDAKVRVWSIPD 585
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGH-MAQSA 87
H V +NP D +S S DA VRVW+ V +D H M SA
Sbjct: 552 HSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSA 601
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 39.1 bits (87), Expect = 0.007
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 51 HHDDLLLST-SSDATVRVWAASSGACVSVFDGHMAQ-SALGAAWSAYPQLATKALSGGGD 108
H D L+L T +S + V++W S A V+ FDGH + +A+ + + Y LAT A G
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGY-FLATAAEDG--- 417
Query: 109 HTLRLWDM 116
+RLWD+
Sbjct: 418 --VRLWDL 423
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW---AASSGACVSVFDGHMAQ 85
TL GH V + DL+L+ S+D TVR+W + AC + H A+
Sbjct: 259 TLTGHSKKVTSVKF-VGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAE 311
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 39.1 bits (87), Expect = 0.007
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 51 HHDDLLLST-SSDATVRVWAASSGACVSVFDGHMAQ-SALGAAWSAYPQLATKALSGGGD 108
H D L+L T +S + V++W S A V+ FDGH + +A+ + + Y LAT A G
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGY-FLATAAEDG--- 417
Query: 109 HTLRLWDM 116
+RLWD+
Sbjct: 418 --VRLWDL 423
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW---AASSGACVSVFDGHMAQ 85
TL GH V + DL+L+ S+D TVR+W + AC + H A+
Sbjct: 259 TLTGHSKKVTSVKF-VGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAE 311
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 39.1 bits (87), Expect = 0.007
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 18 VTGRSRKGDHGQLTTWKTLRGHKGTVFEASW-NPHHDDLLLSTSSDATVRVW 68
+TG S G QL T L GH+G V+E +W +P + +L S S D V +W
Sbjct: 37 ITGVSNNGGSQQLAT---LTGHRGPVWEVAWAHPKYGSILASCSYDGQVILW 85
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 23 RKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLST-SSDATVRVWA--ASSGACVSVF 79
++G+ Q T HK +V +W PH L L+ SSD + V+ A G S
Sbjct: 86 KEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNISVFTARADGGWDTSRI 145
Query: 80 DGHMAQSALGAAW---SAYPQLATKAL--------SGGGDHTLRLWDM 116
D +W +A L + L SGG D+T+++W +
Sbjct: 146 DQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGCDNTVKVWKL 193
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+TL GH+ ++P + S S D +++W C+ + GH G
Sbjct: 95 RTLTGHRSNCISVDFHPF-GEFFASGSLDTNLKIWDIRKKGCIHTYKGH----TRGVNVL 149
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
+ +SGG D+ +++WD+
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDL 172
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
T +GH V + P ++S D V+VW ++G ++ F H Q +
Sbjct: 138 TYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQ---SLDF 193
Query: 95 YPQLATKALSGGGDHTLRLWDMNDF 119
+P A +G D T++ WD+ F
Sbjct: 194 HPHEFLLA-TGSADRTVKFWDLETF 217
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+TL GH+ ++P + S S D +++W C+ + GH G
Sbjct: 95 RTLTGHRSNCISVDFHPF-GEFFASGSLDTNLKIWDIRKKGCIHTYKGH----TRGVNVL 149
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
+ +SGG D+ +++WD+
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDL 172
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
T +GH V + P ++S D V+VW ++G ++ F H Q +
Sbjct: 138 TYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQ---SLDF 193
Query: 95 YPQLATKALSGGGDHTLRLWDMNDF 119
+P A +G D T++ WD+ F
Sbjct: 194 HPHEFLLA-TGSADRTVKFWDLETF 217
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 38.7 bits (86), Expect = 0.009
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+TL GH+ +++P + S S D +++W C+ + GH G
Sbjct: 188 RTLTGHRSNCVSVNFHPF-GEFFASGSLDTNLKIWDIRKKGCIHTYKGH----TRGVNVL 242
Query: 94 AYPQLATKALSGGGDHTLRLWDM 116
+ +SGG D+ +++WD+
Sbjct: 243 RFTPDGRWIVSGGEDNVVKVWDL 265
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 38.7 bits (86), Expect = 0.009
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH V W+P+ +L+ S S DA V++W+ SSG C+ + +YP
Sbjct: 672 KGHSSNVHSVCWSPN-GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 729
Query: 97 QLATKALSGGGDHTLRLWD 115
L L GG + LW+
Sbjct: 730 DL----LVIGGYQAIELWN 744
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+T+ GH V ++P +LL S S+ +R W ++ +CV G Q
Sbjct: 587 RTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQ 637
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.009
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH V W+P+ +L+ S S DA V++W+ SSG C+ + +YP
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 97 QLATKALSGGGDHTLRLWD 115
L L GG + LW+
Sbjct: 732 DL----LVIGGYQAIELWN 746
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+T+ GH V ++P +LL S S+ +R W ++ +CV G Q
Sbjct: 589 RTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQ 639
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.009
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH V W+P+ +L+ S S DA V++W+ SSG C+ + +YP
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 97 QLATKALSGGGDHTLRLWD 115
L L GG + LW+
Sbjct: 732 DL----LVIGGYQAIELWN 746
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+T+ GH V ++P +LL S S+ +R W ++ +CV G Q
Sbjct: 589 RTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQ 639
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.009
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH V W+P+ +L+ S S DA V++W+ SSG C+ + +YP
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 97 QLATKALSGGGDHTLRLWD 115
L L GG + LW+
Sbjct: 732 DL----LVIGGYQAIELWN 746
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+T+ GH V ++P +LL S S+ +R W ++ +CV G Q
Sbjct: 589 RTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQ 639
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 38.7 bits (86), Expect = 0.009
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH V W+P+ +L+ S S DA V++W+ SSG C+ + +YP
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDA-VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYP 731
Query: 97 QLATKALSGGGDHTLRLWD 115
L L GG + LW+
Sbjct: 732 DL----LVIGGYQAIELWN 746
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+T+ GH V ++P +LL S S+ +R W ++ +CV G Q
Sbjct: 589 RTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA-SCVRAVKGASTQ 639
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 38.7 bits (86), Expect = 0.009
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 418 LSEAATVLAKSKKQENLCLAAEIAKAAGRATLADHIEKKAQNTIPSTSD-ETEEILKELP 476
L+ A T LA++KKQ +L L ++ + + +A N I D E EI+
Sbjct: 523 LATAETKLAEAKKQYDLMLESKQLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEK 582
Query: 477 TKMELLLKQNNNSEDKAVAICAFGQKNVIDMSIQIE-LNIIVSFKEYGSKPALN 529
K+E ++K +N DK ++ C K + ++IQ E ++I+S +E LN
Sbjct: 583 DKVEKIIKDLSNKFDKELSDCKEESKRQL-LTIQEEHSSLILSLREEHESKELN 635
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 38.7 bits (86), Expect = 0.009
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSALGAAWS 93
T GH V + P LLLS D V++W +SG C+ + GH A++ +S
Sbjct: 277 TWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGH-AKAVRDICFS 335
Query: 94 AYPQLATKALSGGGDHTLRLWD 115
+K L+ G D ++ WD
Sbjct: 336 ---NDGSKFLTAGYDKNIKYWD 354
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 38.3 bits (85), Expect = 0.013
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K+L H+ V + W+P D L+S S D + +W + G+ + D H G AW
Sbjct: 47 KSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDVNKGSVHQILDAH-CHYVQGVAWD 104
Query: 94 AYPQLATKALSGGGDHTLRLW 114
LA S D T R++
Sbjct: 105 ---PLAKYVASLSSDRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 38.3 bits (85), Expect = 0.013
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K+L H+ V + W+P D L+S S D + +W + G+ + D H G AW
Sbjct: 106 KSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDVNKGSVHQILDAH-CHYVQGVAWD 163
Query: 94 AYPQLATKALSGGGDHTLRLW 114
LA S D T R++
Sbjct: 164 ---PLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 38.3 bits (85), Expect = 0.013
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
K+L H+ V + W+P D L+S S D + +W + G+ + D H G AW
Sbjct: 106 KSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDVNKGSVHQILDAH-CHYVQGVAWD 163
Query: 94 AYPQLATKALSGGGDHTLRLW 114
LA S D T R++
Sbjct: 164 ---PLAKYVASLSSDRTCRIY 181
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 38.3 bits (85), Expect = 0.013
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 25 GDHGQLTTWKT--------LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGAC 75
G+ G+L W T ++ H+ V S+NP ++ +L + SSD+TV ++ A
Sbjct: 237 GEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAP 296
Query: 76 VSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMN 117
+ V H + W P T S G D L +WD+N
Sbjct: 297 LHVMSSHEGE-VFQVEWD--PNHETVLASSGEDRRLMVWDLN 335
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA------CVSVFDGHMAQSALG 89
L GH + SW+P + LLS S D + +W S+ + V++GH +SA+
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGH--ESAI- 220
Query: 90 AAWSAYPQLATKALSGGGDHTLRLWD 115
A S + + S G D L +WD
Sbjct: 221 ADVSWHMKNENLFGSAGEDGRLVIWD 246
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH G + + SW+ LLS+S D TVR+W C+ F + + + + P
Sbjct: 319 KGHIGEILDLSWS--EKGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCV----AFNP 372
Query: 97 QLATKALSGGGDHTLRLWDM 116
+SG D +R+WD+
Sbjct: 373 VDDNYFISGSIDGKVRIWDV 392
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 38.3 bits (85), Expect = 0.013
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH G + + SW+ LLS+S D TVR+W C+ F + + + + P
Sbjct: 319 KGHIGEILDLSWS--EKGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCV----AFNP 372
Query: 97 QLATKALSGGGDHTLRLWDM 116
+SG D +R+WD+
Sbjct: 373 VDDNYFISGSIDGKVRIWDV 392
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 37.9 bits (84), Expect = 0.017
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 28 GQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA 87
G+ KT GH+G V W+P LL S S D+T ++W V H +
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDP-TGSLLASCSDDSTAKIWNIKQSTFVHDLREH-TKEI 493
Query: 88 LGAAWSA------YPQLATKALSGGGDHTLRLWD 115
WS P S D T++LWD
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Score = 37.1 bits (82), Expect = 0.029
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG 81
+ L GH V +W+P LL S S DAT R+W+ G+ +V G
Sbjct: 259 RILEGHTSEVCACAWSPSAS-LLASGSGDATARIWSIPEGSFKAVHTG 305
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL HKG +F WN D LL+ S D T VW + F+ H + L W
Sbjct: 360 TLSKHKGPIFSLKWN-KKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPT-LDVDWRN 417
Query: 95 YPQLATKA 102
AT +
Sbjct: 418 NVSFATSS 425
Score = 35.1 bits (77), Expect = 0.12
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 12/98 (12%)
Query: 29 QLTTWKTLRGHKGTVFEASW--------NPHHDDLLLSTSSDATVRVWAASSGACVSVFD 80
Q T LR H ++ W NP+ L S S D+TV++W A G + F+
Sbjct: 479 QSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFN 538
Query: 81 GHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMND 118
GH + A+S + SG D ++ +W + +
Sbjct: 539 GH-REPVYSLAFSPNGEYIA---SGSLDKSIHIWSIKE 572
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 37.9 bits (84), Expect = 0.017
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 42 TVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY-PQLAT 100
T+F ++N + +++ S S D V+VW ++G C + H + AW+ Y P++
Sbjct: 216 TLFFLTFNWENRNIVASGSEDKKVKVWDVATGKCKVTME-HHEKKVHAVAWNNYTPEV-- 272
Query: 101 KALSGGGDHTLRLWDMND 118
LSG D T+ L D D
Sbjct: 273 -LLSGSRDRTVVLKDGRD 289
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 43 VFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKA 102
V + +W+PH + + + D TV+ + + F H S + + +Y A
Sbjct: 303 VEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSI--SYNIHAPNL 360
Query: 103 L-SGGGDHTLRLWDMND 118
L +G D +++LWD+++
Sbjct: 361 LATGSADESVKLWDLSN 377
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 37.9 bits (84), Expect = 0.017
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
L H+G VF+ W+P+H+ +L S+ D + VW
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVW 333
Score = 33.1 bits (72), Expect = 0.47
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSALGAAWSAYPQ 97
H+ + S+NP ++ +L + SSD+TV ++ A + V H + W P
Sbjct: 260 HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGE-VFQVEWD--PN 316
Query: 98 LATKALSGGGDHTLRLWDMN 117
T S G D L +WD+N
Sbjct: 317 HETVLASSGEDRRLMVWDIN 336
Score = 30.7 bits (66), Expect = 2.5
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGAC------VSVFDGHMAQSAL- 88
L GH+ + +W+ + LLS S D + +W S+ A + V++GH QS +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGH--QSIIE 222
Query: 89 GAAWSAYPQLATKALSGGGDHTLRLWDM 116
AW + + S G D L +WD+
Sbjct: 223 DVAW--HMKNENIFGSAGDDCQLVIWDL 248
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.9 bits (84), Expect = 0.017
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAA---SSGACVSVFDGHMAQ-SALGAA 91
LRGH + + DLLLS S+D TVR+W SS +C+ V GH +L A
Sbjct: 322 LRGHDKAILSLF---NVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAV 378
Query: 92 WSAYPQLATKALSGGGDHTLRLWDMN 117
+SG D ++ W ++
Sbjct: 379 REKELDDVVSIISGSLDGEVKCWKVS 404
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 37.5 bits (83), Expect = 0.022
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 26 DHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQ 85
+ G L T + GH V + ++NP + S S D T+++W S D H+
Sbjct: 129 EKGWLCT-QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLK- 186
Query: 86 SALGAAWSAYPQLATK--ALSGGGDHTLRLWD 115
G Y K ++G DHT ++WD
Sbjct: 187 ---GVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Score = 37.1 bits (82), Expect = 0.029
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
L++ S D T +VW + +CV +GH +A S +P+L ++G D T+R+W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNV---SAVSFHPELPI-IITGSEDGTVRIWH 257
Query: 116 MNDFPAE 122
+ E
Sbjct: 258 ATTYRLE 264
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASS 72
+TL GH V S++P ++++ S D TVR+W A++
Sbjct: 223 QTLEGHTHNVSAVSFHPELP-IIITGSEDGTVRIWHATT 260
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 37.1 bits (82), Expect = 0.029
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH+ V + NP++ + S S D +R+W SS V F GH Q A+ ++
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGH--QGAVRGLTASTD- 110
Query: 98 LATKALSGGGDHTLRLWDM 116
+S G D T+RLW++
Sbjct: 111 -GNVLVSCGTDCTVRLWNV 128
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 37.1 bits (82), Expect = 0.029
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 27 HGQLTTW-KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG-HMA 84
+G+ W T GHKG V+ S + + S S+D T ++W A +G + F+ H+
Sbjct: 42 NGETGDWIGTFEGHKGAVWSCSLDKNAIRAA-SASADFTAKIWNALTGDELHSFEHKHIV 100
Query: 85 QSALGAAWSAYPQLATKALSGGGDHTLRLWDMN 117
++ A+ + + L+GG + LR++D+N
Sbjct: 101 RAC------AFSEDTHRLLTGGMEKILRIFDLN 127
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 36.7 bits (81), Expect = 0.038
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
L++ S D T +VW + +CV DGH +A +P+L ++G D T+R+W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNV---SAVCFHPELPI-IITGSEDGTVRIWH 257
Query: 116 MNDFPAE 122
+ E
Sbjct: 258 ATTYRLE 264
Score = 35.5 bits (78), Expect = 0.088
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V + +NP + S S D T+++W S D H Q +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH--QKGVNCVDYFTGG 197
Query: 98 LATKALSGGGDHTLRLWD 115
++G DHT ++WD
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 36.7 bits (81), Expect = 0.038
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
L++ S D T +VW + +CV DGH +A +P+L ++G D T+R+W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNV---SAVCFHPELPI-IITGSEDGTVRIWH 257
Query: 116 MNDFPAE 122
+ E
Sbjct: 258 ATTYRLE 264
Score = 35.5 bits (78), Expect = 0.088
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V + +NP + S S D T+++W S D H Q +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH--QKGVNCVDYFTGG 197
Query: 98 LATKALSGGGDHTLRLWD 115
++G DHT ++WD
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 36.7 bits (81), Expect = 0.038
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
L++ S D T +VW + +CV DGH +A +P+L ++G D T+R+W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNV---SAVCFHPELPI-IITGSEDGTVRIWH 257
Query: 116 MNDFPAE 122
+ E
Sbjct: 258 ATTYRLE 264
Score = 35.5 bits (78), Expect = 0.088
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V + +NP + S S D T+++W S D H Q +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH--QKGVNCVDYFTGG 197
Query: 98 LATKALSGGGDHTLRLWD 115
++G DHT ++WD
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 36.7 bits (81), Expect = 0.038
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
+GH G V S + + + S S+D +VR+W +G C+ V+ ++ + AW+
Sbjct: 420 KGHTGAVTSISTDSS-GEWIASGSTDGSVRMWEVETGRCLKVW--QFDEAIMCVAWNPLS 476
Query: 97 QLATKALSGGGD 108
+L A++ G D
Sbjct: 477 RLPVLAVAMGRD 488
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 36.7 bits (81), Expect = 0.038
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GH V + ++NP + S S D T+++W S D H Q +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAH--QKGVNCVDYFTGG 197
Query: 98 LATKALSGGGDHTLRLWD 115
++G DHT ++WD
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
Score = 35.1 bits (77), Expect = 0.12
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
L++ S D T +VW + +CV +GH +A +P+L ++G D T+R+W
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNV---SAVCFHPELPI-IITGSEDGTVRIWH 257
Query: 116 MNDFPAE 122
+ E
Sbjct: 258 ATTYRLE 264
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASS 72
+TL GH V ++P ++++ S D TVR+W A++
Sbjct: 223 QTLEGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHATT 260
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 36.7 bits (81), Expect = 0.038
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 53 DDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLR 112
+D L++ S D T RVW+ S G+C +V H A +S + + ++G D LR
Sbjct: 1032 EDTLITGSDDWTARVWSVSRGSCDAVLACH-AGPVQSVEYSPFDK---GIITGSADGLLR 1087
Query: 113 LWDMND 118
W+ ND
Sbjct: 1088 FWE-ND 1092
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 36.3 bits (80), Expect = 0.051
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 24 KGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW--AASSGACVSVFDG 81
+ D G + LRGH +V + D+L S S+D TVR+W +A +C+++ +G
Sbjct: 289 RDDGGDIVVVGMLRGHTESVLCLAVV---SDILCSGSADKTVRLWKCSAKDYSCLAMLEG 345
Query: 82 HMAQ-SALGAAW---SAYPQLATKALSGGGDHTLRLWDM 116
H+ L A+ + + SGG D +++W +
Sbjct: 346 HLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 56 LLSTSSDATVRVWAASS----GACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTL 111
L + S+D VR+W A++ S D + G A + LA K + DH +
Sbjct: 51 LYTGSNDGVVRLWNANTLETLAEASSNGDVITGERGGGGAVKSLVILADKLFTAHQDHKI 110
Query: 112 RLWDMNDFPAE 122
R+W +ND E
Sbjct: 111 RVWKINDVVEE 121
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 36.3 bits (80), Expect = 0.051
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 24 KGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFD 80
KGD L T L GH+ V + P D L + S D TVR+W +SG C V +
Sbjct: 130 KGDSFSLLT--QLDGHQKVVTGIAL-PSGSDKLYTASKDETVRIWDCASGQCTGVLN 183
Score = 36.3 bits (80), Expect = 0.051
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 53 DDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKA-LSGGGDHTL 111
D LLS S D TV++WAA+ G + V H + + A + A L D++L
Sbjct: 317 DQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSL 376
Query: 112 RLWDMNDF 119
L+D+ F
Sbjct: 377 HLYDLPSF 384
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 36.3 bits (80), Expect = 0.051
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 29 QLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFD-----GHM 83
+LT +++L G +W+P + S SSD +R W A+S C V+ G +
Sbjct: 187 KLTYYRSLPRVSGRALSVTWSPDAKRIF-SGSSDGLIRCWDATS--CHEVYRITAGLGGL 243
Query: 84 AQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
S+ WS + +SG T++ WD
Sbjct: 244 GSSSEICVWSLLSLRCSVLVSGDSTGTVQFWD 275
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 36.3 bits (80), Expect = 0.051
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGH 82
K L GH+ V++ ++ + L++ SSD T R+W+ +G V V+ GH
Sbjct: 247 KVLTGHQRWVWDCVFSVD-GEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY 95
L+ H G + + +P + L + SSD TV++W V GH + +S
Sbjct: 207 LQAHNGHILKCLLSPANK-YLATASSDKTVKIWNVDGFKLEKVLTGHQ-RWVWDCVFSVD 264
Query: 96 PQLATKALSGGGDHTLRLWDM 116
+ A S D T RLW M
Sbjct: 265 GEFLVTASS---DMTARLWSM 282
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 36.3 bits (80), Expect = 0.051
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 18 VTGRSRKGDHGQLTTWKTLRGHKGTVFEASW-NPHHDDLLLSTSSDATVRVWA---ASSG 73
+TG S G L T L GH+G V++ +W +P LL S S D + +W +
Sbjct: 37 ITGVSNSGGSQHLAT---LTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQW 93
Query: 74 ACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLW 114
VF H S AW+ + +L G D + ++
Sbjct: 94 TQAHVFTDHKV-SVNSIAWAPH-ELGLSLACGASDGNISVF 132
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 35.9 bits (79), Expect = 0.067
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 17 DVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDL-LLSTSSDATVRVWAASSGAC 75
D++G + D + +TLR H + P D L L+S D V+ W +
Sbjct: 112 DLSGVVQVFDIKERMALRTLRSHSAPARFVKY-PVQDKLHLVSGGDDGVVKYWDVAGATV 170
Query: 76 VSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
+S GH G P + ++G DHT+++WD
Sbjct: 171 ISDLLGHKDYVRCG---DCSPVNDSMLVTGSYDHTVKVWD 207
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 31 TTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAA 70
T L GHK V +P +D +L++ S D TV+VW A
Sbjct: 169 TVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDA 208
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.9 bits (79), Expect = 0.067
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 HGQLTTW-KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG-HMA 84
+G+ W T GHKG V+ + + ++ S S+D + ++W A +G + F+ H+
Sbjct: 47 NGETGDWIGTFEGHKGAVWSSCLD-NNALRAASASADFSAKLWDALTGDVLHSFEHKHIV 105
Query: 85 QSALGAAWSAYPQLATKALSGGGDHTLRLWDMN--DFPAEAYDEN 127
++ A+ + L+GG + LR++DMN D P D++
Sbjct: 106 RAC------AFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKS 144
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 35.9 bits (79), Expect = 0.067
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 HGQLTTW-KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG-HMA 84
+G+ W T GHKG V+ + + ++ S S+D + ++W A +G + F+ H+
Sbjct: 47 NGETGDWIGTFEGHKGAVWSSCLD-NNALRAASASADFSAKLWDALTGDVLHSFEHKHIV 105
Query: 85 QSALGAAWSAYPQLATKALSGGGDHTLRLWDMN--DFPAEAYDEN 127
++ A+ + L+GG + LR++DMN D P D++
Sbjct: 106 RAC------AFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKS 144
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 35.9 bits (79), Expect = 0.067
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 51 HHDDLLLST-SSDATVRVWAASSGACVSVFDGHMAQ-SALGAAWSAYPQLATKALSGGGD 108
H D L+L T ++ + V++W S A V+ F GH + +++ + + Y LAT AL G
Sbjct: 363 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGY-FLATAALDG--- 418
Query: 109 HTLRLWDM 116
+RLWD+
Sbjct: 419 --VRLWDL 424
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAAS 71
TL GH V + DL+L+ SSD TVR+W S
Sbjct: 259 TLTGHSKKVTSIKF-VGDTDLVLTASSDKTVRIWGCS 294
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVF 79
GH G + + SW+ ++ LLS S D +VR+W C+ +F
Sbjct: 354 GHSGDILDISWSKNNR--LLSASVDNSVRLWQIGCEDCLGIF 393
Score = 32.3 bits (70), Expect = 0.82
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAAS 71
H V +NP DD +S S D VR+W+AS
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSAS 427
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVF 79
GH G + + SW+ ++ LLS S D +VR+W C+ +F
Sbjct: 354 GHSGDILDISWSKNNR--LLSASVDNSVRLWQIGCEDCLGIF 393
Score = 32.3 bits (70), Expect = 0.82
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAAS 71
H V +NP DD +S S D VR+W+AS
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSAS 427
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 35.1 bits (77), Expect = 0.12
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 39 HKGTVFEASWNPHHDD---LLLSTSSDATVRVWAASSGACVSVFDGHMAQSALG-AAWSA 94
H+ +V+ A+W P +D LLL+ S D TV++W V GH +LG AA +A
Sbjct: 13 HEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGH----SLGVAALAA 68
Query: 95 YPQLATKALSGGGDHTLRLWDMN 117
+P A S D +R++D++
Sbjct: 69 HPS-GIIAASSSIDSFVRVFDVD 90
Score = 30.3 bits (65), Expect = 3.3
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY 95
L GH V ++P +L S S D V + A + GH ++ + A
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGH---TSWVLSVDAS 252
Query: 96 PQLATKALSGGGDHTLRLWDM 116
P A +G D T+RLWD+
Sbjct: 253 PDGGAIA-TGSSDRTVRLWDL 272
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG 81
K L GH V + ++ ++ + S+S D T+RVW S G C+ V G
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQ-YIASSSLDKTIRVWELSRGVCIRVIYG 256
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 35.1 bits (77), Expect = 0.12
Identities = 17/70 (24%), Positives = 27/70 (38%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL GH+ V W+ + +L + D +R W C V D Q +
Sbjct: 185 TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQLGVRPPILK 244
Query: 95 YPQLATKALS 104
P +++K S
Sbjct: 245 RPAVSSKFFS 254
Score = 32.3 bits (70), Expect = 0.82
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GHK + A W P + ++ S D V+VW ++ V D M A S+
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQV--VVDFKMPGKVYRTAMSSMAM 158
Query: 98 LATKALSGGGDHTLRLWDM 116
T +G D +RL D+
Sbjct: 159 SHTLIAAGTDDVQVRLCDI 177
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 34.7 bits (76), Expect = 0.15
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 55 LLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLW 114
LL S+S D T++VW + C+ H A+ + S + L +G D T+++W
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAH--DDAINSVMSGFDDL---VFTGSADGTVKVW 303
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSV 78
GHKG+++ SW+P +L+ S+D + +VW A G SV
Sbjct: 94 GHKGSIYAVSWSP-DSKRVLTVSADKSAKVWEVAEDGTIGSV 134
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 34.7 bits (76), Expect = 0.15
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 418 LSEAATVLAKSKKQENLCLAAEIAKAAGRATLADHIEKKAQNTIPSTSD-ETEEILKELP 476
L+ A T LA++KKQ +L L ++ + + +A N I D E EI+
Sbjct: 523 LATAETKLAEAKKQYDLMLESKQLELSRHLKELSQRNDQAINEIRRKYDVEKHEIINSEK 582
Query: 477 TKMELLLKQNNNSEDKAVAICAFGQKNVIDMSIQIE-LNIIVSFKEYGSKPALN 529
K+E ++K+ + DK ++ C K + ++IQ E + I++ +E LN
Sbjct: 583 DKVEKIIKELSTKYDKGLSDCKEESKRQL-LTIQEEHSSRILNIREEHESKELN 635
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 34.3 bits (75), Expect = 0.20
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 55 LLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLW 114
LL S S D T +VW S CV + H + A+ A S + L +G D T+++W
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAH--EDAVNAVVSGFDGL---VFTGSADGTVKVW 279
Query: 115 DMND 118
D
Sbjct: 280 RRED 283
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 53 DDLLLSTSSDATVRVWAASSGA--CVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHT 110
D L+ + S+D TV+VW A F + + A Q AT G D T
Sbjct: 264 DGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGT 323
Query: 111 LRLWD 115
+ W+
Sbjct: 324 VNFWE 328
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 34.3 bits (75), Expect = 0.20
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 27 HGQLTTW-KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG-HMA 84
+G+ W T GHKG V+ + + ++ S S+D + ++W A +G + F+ H+
Sbjct: 47 NGETGDWIGTFEGHKGAVWSSCLD-NNALRAASASADFSAKLWDALTGDVLHSFEHKHIV 105
Query: 85 QSALGAAWSAYPQLATKALSGGGDHTLRLWDMN--DFPAEAYDEN 127
++ A+ Q ++GG + LR++D+N D P D++
Sbjct: 106 RAC------AFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKS 144
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.9 bits (74), Expect = 0.27
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 34 KTLRG-HKGTVFEASWNPHHDDLLLSTSSDAT-VRVWAASSGACVSVFDGHMAQSALGAA 91
+TLRG H+ V +WN H +L + D V + + + GH + G
Sbjct: 188 RTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIIGTYVGH-TEEVCGLK 243
Query: 92 WSAYPQLATKALSGGGDHTLRLWD 115
WS + K SGG D+ + +WD
Sbjct: 244 WS---ESGKKLASGGNDNVVHIWD 264
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.9 bits (74), Expect = 0.27
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 34 KTLRG-HKGTVFEASWNPHHDDLLLSTSSDAT-VRVWAASSGACVSVFDGHMAQSALGAA 91
+TLRG H+ V +WN H +L + D V + V + GH + G
Sbjct: 170 RTLRGGHESRVGSLAWNNH---ILTTGGMDGKIVNNDVRIRSSIVETYLGH-TEEVCGLK 225
Query: 92 WSAYPQLATKALSGGGDHTLRLWD 115
WS + K SGG D+ + +WD
Sbjct: 226 WS---ESGKKLASGGNDNVVHIWD 246
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 33.9 bits (74), Expect = 0.27
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSV 78
GHKG+++ SW+P +L+ S+D + ++W S S+
Sbjct: 230 GHKGSIYAVSWSPDGKQ-VLTVSADKSAKIWDISDNGSGSL 269
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.9 bits (74), Expect = 0.27
Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 20 GRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG-ACVSV 78
G KGD + K +GH + W+P + +L++S D ++R+W ++ + V
Sbjct: 259 GEFMKGDM-YIRDLKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQV 317
Query: 79 FDGHMAQ-SALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
+A+ + A+ + + G GD ++++W +
Sbjct: 318 IKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSIQIWSL 356
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 33.9 bits (74), Expect = 0.27
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSV-FDGHMAQSALGAAWSAYP 96
GH +V + W+P +++ S S D +V VW G ++ F H A + +W+
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNV-ISWN--- 322
Query: 97 QLATKALSGGGD 108
+LA+ L+ G D
Sbjct: 323 RLASCMLASGSD 334
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRV----WAASSGACVSVFDGHMAQSALGA 90
+ + H V SWN +L S S D T + A V+ F+ H
Sbjct: 308 SFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYH-KHPITSI 366
Query: 91 AWSAYPQLATKALSGGGDHTLRLWDMN 117
WSA+ + +T A++ GD+ L +WD++
Sbjct: 367 EWSAH-EASTLAVT-SGDNQLTIWDLS 391
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACV---SVFDGHMAQSALGAAWSA 94
GHK + W+P LLS + + +W +SG+ F GH A S WS
Sbjct: 221 GHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTA-SVEDLQWS- 278
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
P S D ++ +WD+
Sbjct: 279 -PAEENVFASCSVDGSVAVWDI 299
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 33.9 bits (74), Expect = 0.27
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY 95
L GHK +V +++ + LL S D V+++ ASSG V DG A G W +
Sbjct: 109 LPGHKDSVSCLAFS-YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGA----GIEWVRW 163
Query: 96 PQLATKALSGGGDHTLRLWD 115
L+G D +L +W+
Sbjct: 164 HPRGHIVLAGSEDCSLWMWN 183
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
T GHKG ++ + +P L+ + D +W +G + GH S A+S
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGH-KDSVSCLAFSY 123
Query: 95 YPQLATKALSGGGDHTLRLWD 115
QL SGG D ++++D
Sbjct: 124 DGQLLA---SGGLDGVVQIFD 141
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.5 bits (73), Expect = 0.36
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACV 76
L GHK + + P D L S S D T+ +W +SG CV
Sbjct: 183 LEGHKNDIKGIAL-PQGSDKLFSVSGDGTLLIWDCNSGQCV 222
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 35 TLRGHKGTVFEA-SWNPHHDDLLLSTSSDATVRVWAASSGACVSV 78
TL+ H GTV W D L+S+S D T+++WA S + V
Sbjct: 347 TLKQHIGTVTSLLCW----DKCLISSSLDGTIKLWACSENESLKV 387
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA-CVSVFDGHMAQSA-LGAAW 92
+L GH V W P HD ++ S+S D +VR W +G +++F G + +G
Sbjct: 267 SLVGHTQCVSSVVW-PEHD-VIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES 324
Query: 93 SAYPQLATKALSGGGDHTLRLWD 115
SA +GG D LR+WD
Sbjct: 325 SAL------IAAGGSDPILRVWD 341
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 29 QLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW----AASSGACVSV 78
++ +K LRGHK +V S +++ S+S D T+ +W + S G VSV
Sbjct: 194 KVRAYKILRGHKASVQSVS-AQKSGNMVCSSSWDCTINLWNTNESTSEGESVSV 246
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA-CVSVFDGHMAQSA-LGAAW 92
+L GH V W P HD ++ S+S D +VR W +G +++F G + +G
Sbjct: 267 SLVGHTQCVSSVVW-PEHD-VIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES 324
Query: 93 SAYPQLATKALSGGGDHTLRLWD 115
SA +GG D LR+WD
Sbjct: 325 SAL------IAAGGSDPILRVWD 341
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQL 98
H + W+ LLS S D + +W + +SV D H L A W
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTH-NDKVLSADW----WK 411
Query: 99 ATKALSGGGDHTLRL 113
+SGG D LR+
Sbjct: 412 GESVVSGGADSNLRI 426
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 29 QLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW----AASSGACVSV 78
++ +K LRGHK +V S +++ S+S D T+ +W + S G VSV
Sbjct: 194 KVRAYKILRGHKASVQSVS-AQKSGNMVCSSSWDCTINLWNTNESTSEGESVSV 246
>At5g05680.1 68418.m00625 nuclear pore complex protein-related
contains weak similarity to Nuclear pore complex protein
Nup88 (Nucleoporin Nup88) (88 kDa nuclear pore complex
protein) (Swiss-Prot:Q99567) [Homo sapiens]
Length = 810
Score = 33.5 bits (73), Expect = 0.36
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 42 TVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATK 101
T+ +ASW+P D L SSDA R++ SS + + ++ G + +A +
Sbjct: 164 TLLQASWHPDSDTHLGILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTA-SSIYPA 222
Query: 102 ALSGGGDHTLRLWD 115
S GGDH LWD
Sbjct: 223 DFSFGGDH---LWD 233
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 40 KGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLA 99
+G + SWN +L STS + T +W + F + + W+ P +
Sbjct: 172 QGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWN--PNVT 229
Query: 100 TKALSGGGDH---TLRLWDMND 118
T+ + D TL+LWDM +
Sbjct: 230 TQIMVASDDDSSPTLKLWDMRN 251
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 347 YRKALTRLSTHDVRGAVATLAENKLYKEAYVLCRVRYMDSIATQILHQWANYSNLCGNFE 406
Y K ++ + +D+R + T + +K +KE L T + A+ GN
Sbjct: 618 YMKVVSAMVNNDLRSLIYTRS-HKFWKETLALLCTFAQGEQWTTLCDALASKLMAAGNTL 676
Query: 407 IATVCFIALGDLSEAATVLAKSKKQE 432
A +C+I G++ + ++S E
Sbjct: 677 AAVLCYICAGNVDRTVEIWSRSLANE 702
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 40 KGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLA 99
+G + SWN +L STS + T +W + F + + W+ P +
Sbjct: 172 QGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWN--PNVT 229
Query: 100 TKALSGGGDH---TLRLWDMND 118
T+ + D TL+LWDM +
Sbjct: 230 TQIMVASDDDSSPTLKLWDMRN 251
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 347 YRKALTRLSTHDVRGAVATLAENKLYKEAYVLCRVRYMDSIATQILHQWANYSNLCGNFE 406
Y K ++ + +D+R + T + +K +KE L T + A+ GN
Sbjct: 620 YMKVVSAMVNNDLRSLIYTRS-HKFWKETLALLCTFAQGEQWTTLCDALASKLMAAGNTL 678
Query: 407 IATVCFIALGDLSEAATVLAKSKKQE 432
A +C+I G++ + ++S E
Sbjct: 679 AAVLCYICAGNVDRTVEIWSRSLANE 704
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 14 NRTDVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG 73
N + S K T +GH+ V + + D+ LL ++S + V++W S+G
Sbjct: 380 NNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLS--EDNTLLMSTSHSEVKIWNPSTG 437
Query: 74 ACVSVFDGHMAQSALGAAWSAYPQLATKA 102
+C+ D +L + Y + TK+
Sbjct: 438 SCLRTIDSGYGLCSLIVPQNKYGIVGTKS 466
Score = 32.7 bits (71), Expect = 0.62
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 61 SDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
+D ++R+W G C F+ H + A+ A Y ++ + SG D+ + LWD+
Sbjct: 84 ADGSIRIWDTEKGTCEVNFNSH--KGAVTAL--RYNKVGSMLASGSKDNDIILWDV 135
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAY 95
LRGH+ V + + L+ S+S D +RVW + C+ + GH ++ WS
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLV-SSSKDKFLRVWDLETQHCMQIVSGHHSE-----VWSVD 197
Query: 96 PQLATK-ALSGGGDHTLRLWDMNDF 119
+ ++G D LR + + ++
Sbjct: 198 TDPEERYVVTGSADQELRFYAVKEY 222
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 26 DHGQLTTWKTLRGHKGTVFEASWNPHHDDL----LLSTSSDATVRVWAASSGACVSVFDG 81
D + T+ K L GH V +W P D+ L+S S D V VW +G + G
Sbjct: 52 DKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKG 111
Query: 82 HMAQ 85
H Q
Sbjct: 112 HQMQ 115
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 33.5 bits (73), Expect = 0.36
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 26 DHGQLTTWKTLRGHKGTVFEASWNPHHDDL----LLSTSSDATVRVWAASSGACVSVFDG 81
D + T+ K L GH V +W P D+ L+S S D V VW +G + G
Sbjct: 52 DKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKG 111
Query: 82 HMAQ 85
H Q
Sbjct: 112 HQMQ 115
>At2g28940.2 68415.m03518 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 462
Score = 33.5 bits (73), Expect = 0.36
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 453 IEKKAQNTIPSTSDETEEILK-ELPTKMELLLKQNNNSEDKAV 494
I+++A+N P +DETEEI+K EL + E LK+ +S K V
Sbjct: 391 IDEEAENVPPPVADETEEIIKAELNGESEPELKKQGSSYRKKV 433
>At2g28940.1 68415.m03517 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 343
Score = 33.5 bits (73), Expect = 0.36
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 453 IEKKAQNTIPSTSDETEEILK-ELPTKMELLLKQNNNSEDKAV 494
I+++A+N P +DETEEI+K EL + E LK+ +S K V
Sbjct: 272 IDEEAENVPPPVADETEEIIKAELNGESEPELKKQGSSYRKKV 314
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.5 bits (73), Expect = 0.36
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA 74
L GH + NP +++L+LS +D+ V +W AS+ +
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASS 286
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 33.5 bits (73), Expect = 0.36
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 54 DLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRL 113
++L S S D +++W +G C+ FD H + G ++ + ++ LS D T R+
Sbjct: 276 EMLASGSQDGKIKIWRIRTGVCIRRFDAH----SQGVTSLSFSRDGSQLLSTSFDQTARI 331
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
LLSTS D T R+ SG + F GH + + + ++ ++ D T+++WD
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSY----VNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 17 DVTGRSRKGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACV 76
D T R G+L K RGH V A + +++ SSD TV+VW + + C+
Sbjct: 326 DQTARIHGLKSGKLL--KEFRGHTSYVNHAIFTSD-GSRIITASSDCTVKVWDSKTTDCL 382
Query: 77 SVF 79
F
Sbjct: 383 QTF 385
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 33.5 bits (73), Expect = 0.36
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALG 89
TL GH+ V W+ + +L + D +R W C V D +Q+ LG
Sbjct: 185 TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLD--QSQTQLG 237
Score = 32.3 bits (70), Expect = 0.82
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQ 97
GHK + A W P L ++ S D ++VW + +V D M A S+
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVW--DTNTAQAVVDFKMPGKVYRTAMSSMAM 158
Query: 98 LATKALSGGGDHTLRLWDM 116
T +G D +RL D+
Sbjct: 159 SHTLIAAGTEDVQVRLCDI 177
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.5 bits (73), Expect = 0.36
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASS 72
L GH + NP +D L+LS +D+ V +W AS+
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASA 284
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 33.1 bits (72), Expect = 0.47
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 30 LTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-AASSGACVSVFDGHMAQSAL 88
L T + +GH ++ AS++ ++ +L+ + S D W S A VF +
Sbjct: 153 LETVQEWKGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMG 212
Query: 89 GAAWSAYPQLATKALSGGGDHTLRLWD 115
S+ P +G D TLR+WD
Sbjct: 213 VCCISSNPSDPYSIFTGSYDETLRVWD 239
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 33.1 bits (72), Expect = 0.47
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 50 PHHDDLLLSTSSDATVRVWAASSGACV 76
P D L S S D T+RVW +SG CV
Sbjct: 140 PEGSDKLFSVSIDGTLRVWDCNSGQCV 166
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 35 TLRGHKGTVFEA-SWNPHHDDLLLSTSSDATVRVWAASSGACVSV 78
TL+ H GTV W D L+S+S D T++VWA S + V
Sbjct: 293 TLKQHTGTVTSLLCW----DKCLISSSLDGTIKVWAYSENGILKV 333
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 33.1 bits (72), Expect = 0.47
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 51 HHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHT 110
+H LL S SD ++RVW + ++D +S + + + LSG D T
Sbjct: 861 YHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCF--SLSETGECVLSGSADKT 918
Query: 111 LRLWDM 116
+R+W +
Sbjct: 919 IRVWQI 924
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.1 bits (72), Expect = 0.47
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 27 HGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQS 86
HG T +GHK +V+ + N +L+S ++ +RVW +G+ GH
Sbjct: 202 HGYTPT--IAKGHKESVYALAMNDT-GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Query: 87 ALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
+ S LSG D +RLWD+
Sbjct: 259 RVLLLDST----GRFCLSGSSDSMIRLWDL 284
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 33.1 bits (72), Expect = 0.47
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 27 HGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQS 86
HG T +GHK +V+ + N +L+S ++ +RVW +G+ GH
Sbjct: 202 HGYTPT--IAKGHKESVYALAMNDT-GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Query: 87 ALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
+ S LSG D +RLWD+
Sbjct: 259 RVLLLDST----GRFCLSGSSDSMIRLWDL 284
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 33.1 bits (72), Expect = 0.47
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 56 LLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
+L+ S D T R+W +G CV V +S L + A + + G G + L LW+
Sbjct: 216 ILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKN-LALWN 274
Query: 116 M 116
+
Sbjct: 275 L 275
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 32.7 bits (71), Expect = 0.62
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 49 NPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGD 108
+P D + T + VW+ +G + GH A G +S QL S D
Sbjct: 443 DPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEA-PVHGLMFSPLTQLLA---SSSWD 498
Query: 109 HTLRLWDM 116
+T+RLWD+
Sbjct: 499 YTVRLWDV 506
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDAT-VRVWAASSGACVSVFDGHM-AQSALGAAWSA 94
+GH V +++P D LL+T +D V+VW SG C F H A +AL
Sbjct: 346 QGHYFDVNCVTYSP--DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADN 403
Query: 95 YPQLATKALSGGGDHTLRLWDMNDF 119
+ LS D T+R WD +
Sbjct: 404 H-----SLLSASLDGTVRAWDFKRY 423
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 32.7 bits (71), Expect = 0.62
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 49 NPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGD 108
+P D + T + VW+ +G + GH A G +S QL S D
Sbjct: 483 DPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEA-PVHGLMFSPLTQLLA---SSSWD 538
Query: 109 HTLRLWDM 116
+T+RLWD+
Sbjct: 539 YTVRLWDV 546
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDAT-VRVWAASSGACVSVFDGHM-AQSALGAAWSA 94
+GH V +++P D LL+T +D V+VW SG C F H A +AL
Sbjct: 386 QGHYFDVNCVTYSP--DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADN 443
Query: 95 YPQLATKALSGGGDHTLRLWDMNDF 119
+ LS D T+R WD +
Sbjct: 444 H-----SLLSASLDGTVRAWDFKRY 463
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 30 LTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALG 89
L + + H+G V + +W+ H+ L S D + +W S + +A S
Sbjct: 217 LDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEV 276
Query: 90 AAWSAYPQLATKALSGGGDHTLRLWDM 116
+ P +G D T++L+D+
Sbjct: 277 NCLAFNPFNEWVVATGSTDKTVKLFDL 303
Score = 32.3 bits (70), Expect = 0.82
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 31 TTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAAS 71
T T HK VF+ WNP ++ +L S + VW S
Sbjct: 308 TALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
Score = 31.1 bits (67), Expect = 1.9
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSA-LGAAWSA 94
LRGH + SW+ LLS S DA + +W ++ D A G
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 95 YPQLATKALSG--GGDHTLRLWDM 116
L + L G G D L +WD+
Sbjct: 234 AWHLRHEYLFGSVGDDQYLLIWDL 257
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 39 HKGTVFEASWNPHHDDLLLSTSSDATVRVWAASS--------GACVSVFD--GHMAQSAL 88
H G V A + P + ++ + + +A V V+ S GAC GH ++
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEG-Y 182
Query: 89 GAAWSAYPQLATKALSGGGDHTLRLWDMNDFP 120
G +WS + Q LSG D + LWD+N P
Sbjct: 183 GLSWSKFKQ--GHLLSGSDDAQICLWDINATP 212
Score = 30.3 bits (65), Expect = 3.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
GH + + SWNP D ++ S + D +++W
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 32.3 bits (70), Expect = 0.82
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 31 TTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGA 90
T K+L G G + + + + ++ +TSS+ + VW SSG GH
Sbjct: 264 TLIKSLYGSLGNILDMAVTHDNKSVIAATSSN-NLFVWDVSSGRVRHTLTGH-TDKVCAV 321
Query: 91 AWSAYPQLATKALSGGGDHTLRLWDMN 117
S + + +S D T++LWD++
Sbjct: 322 DVSKFS--SRHVVSAAYDRTIKLWDLH 346
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSA 94
TL GH V + ++S + D T+++W G C + + S A +
Sbjct: 310 TLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTV---LFTSNCNAICLS 366
Query: 95 YPQLATKALSGGGDHTLRLWDM 116
L SG D LRLWD+
Sbjct: 367 IDGLT--VFSGHMDGNLRLWDI 386
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 53 DDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
DD + + S+D +V VW+ S G VS+ L +WS
Sbjct: 457 DDYVAAGSADGSVHVWSLSKGNIVSILK-EQTSPILCCSWS 496
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.3 bits (70), Expect = 0.82
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 34 KTLRG-HKGTVFEASWNPHHDDLLLSTSSDAT-VRVWAASSGACVSVFDGHMAQSALGAA 91
+TLRG H+ V +W+ H +L + D V + V + GH + G
Sbjct: 204 RTLRGGHESRVGSLAWDNH---ILTTGGMDGKIVNNDVRIRSSIVETYLGH-TEEVCGLK 259
Query: 92 WSAYPQLATKALSGGGDHTLRLWD 115
WS + K SGG D+ + +WD
Sbjct: 260 WS---ESGNKQASGGNDNVVHIWD 280
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 32.3 bits (70), Expect = 0.82
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG-HMAQ---SALG 89
+T RGH V W+ L S +D V +W S + S H + SA+
Sbjct: 260 ETYRGHTQEVCGLKWSGSGQQLA-SGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 318
Query: 90 A-AWSAYPQLATKALSGGGDHTLRLWD 115
A AW + GGGD T++ W+
Sbjct: 319 ALAWCPFQANLLATGGGGGDRTIKFWN 345
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 31 TTW-KTLRGHKGTVFEASWNPHHDDLLLSTSS--DATVRVWAASSGACVSVFD 80
T W L H V +W P +LL + D T++ W +GAC++ D
Sbjct: 304 TQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVD 356
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 32.3 bits (70), Expect = 0.82
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDG-HMAQ---SALG 89
+T RGH V W+ L S +D V +W S + S H + SA+
Sbjct: 250 ETYRGHTQEVCGLKWSGSGQQLA-SGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVK 308
Query: 90 A-AWSAYPQLATKALSGGGDHTLRLWD 115
A AW + GGGD T++ W+
Sbjct: 309 ALAWCPFQANLLATGGGGGDRTIKFWN 335
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 31 TTW-KTLRGHKGTVFEASWNPHHDDLLLSTSS--DATVRVWAASSGACVSVFD 80
T W L H V +W P +LL + D T++ W +GAC++ D
Sbjct: 294 TQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVD 346
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 32.3 bits (70), Expect = 0.82
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAW 92
L+GHK V + ++ D+ L + S+D T ++W + G + F +L W
Sbjct: 102 LKGHKEHVTDVVFSSVDDECLATASTDRTEKIW-KTDGTLLQTFKASSGFDSLARVW 157
Score = 32.3 bits (70), Expect = 0.82
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 58 STSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDM 116
S+ D+ RVW + + +F GH+ Q L +S P SGG D+ R+WD+
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQ-VLSVDFS--PN-GYHLASGGEDNQCRIWDL 201
>At3g23920.1 68416.m03005 beta-amylase, putative /
1,4-alpha-D-glucan maltohydrolase, putative similar to
beta-amylase enzyme [Arabidopsis thaliana] GI:6065749,
beta-amylase PCT-BMYI from [Solanum tuberosum]; contains
Pfam profile PF01373: Glycosyl hydrolase family 14
Length = 575
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 431 QENLCLAAEIAKAAGRATLADHIEKKAQNTIPSTSDET-EEILKELPTKMELLLKQNNNS 489
Q+ LC ++ ATLA + +N +P D E+ILK L L QNN
Sbjct: 450 QDALCAPEKLVNQVALATLAAEVPLAGENALPRYDDYAHEQILK----ASALNLDQNNEG 505
Query: 490 EDKAVAICAF 499
E + +CAF
Sbjct: 506 EPR--EMCAF 513
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGH 82
K L GH+ V++ ++ + L++ SSD T R+W+ +G V+ H
Sbjct: 253 KVLTGHERWVWDCDFSMD-GEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 42 TVFEASWNPHHDDLLLSTSSDATVRVWAAS-SGACVSVFDGHMAQSALGAAWSAYPQLAT 100
++ S++P D +L++TS D VR W S SGA ++ SA+ T
Sbjct: 27 SISSLSFSPRAD-ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGT 85
Query: 101 KALSGGGDHTLRLWDM 116
SGG D ++W +
Sbjct: 86 TVFSGGCDKQAKMWPL 101
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 26 DHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVF---DGH 82
+ G++ + L HKG V +N + L S + D TV +W ++ + S + G
Sbjct: 101 ESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGS 160
Query: 83 MAQSALGA-AWSAYPQLATKALSGGGDHTLRLWDMND 118
QS + + +W+ Q + S G T +WD+N+
Sbjct: 161 YMQSEISSLSWNKGFQHVLASTSHNG--TTVIWDVNN 195
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 39 HKGTVFEASWN-PHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMA 84
H G V + S++ P+ +++ D T++VW A++G F+GH A
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEA 507
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 39 HKGTVFEASWN-PHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMA 84
H G V + S++ P+ +++ D T++VW A++G F+GH A
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEA 507
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 31.5 bits (68), Expect = 1.4
Identities = 28/84 (33%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG--ACVSVFDGHMAQSALGAAW 92
+L GH V W+ H LL S D V VW S V F H A W
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNA-PVKDVKW 213
Query: 93 SAYPQLATKALSGGGDHTLRLWDM 116
S + LS G D T RL+D+
Sbjct: 214 S---KQGLSLLSCGYDCTSRLFDV 234
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 39 HKGTVFEASWNPHHDDLLLST-SSDATVRVWAASSGACVSVFDGHMA 84
H G V + +++ + L + T D T++VW A +G + F+GH A
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEA 509
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 39 HKGTVFEASWNPHHDDLLLST-SSDATVRVWAASSGACVSVFDGHMA 84
H G V + +++ + L + T D T++VW A +G + F+GH A
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEA 509
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 23 RKGDHGQLT--TWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGA 74
++ D+G+++ + HK ++ SWNP S S D TV++W+ + A
Sbjct: 677 QRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATS-SRDKTVKIWSVENDA 729
Score = 29.1 bits (62), Expect = 7.7
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 15/101 (14%)
Query: 29 QLTTWKTLRGHKGTVFEASWNP-----------HHDDL-LLSTSSDATVRVW--AASSGA 74
Q++ L GH+ V+ W P +H L +LS S D T+ +W +G
Sbjct: 293 QISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWRPEKKTGV 352
Query: 75 CVSVF-DGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLW 114
V+V G ++ ALG + + L+ G LW
Sbjct: 353 WVNVVCVGELSHCALGFYGGHWSPNSLSILAHGYGGAFHLW 393
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 38 GHKGTVFEASWNPHH-DDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYP 96
GH+ V ++P+ ++S S D TV+VW S+ S GH + A P
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVA---VSP 204
Query: 97 QLATKALSGGGDHTLRLWDM 116
+ SGG D + LWD+
Sbjct: 205 D-GSLCASGGKDGVVLLWDL 223
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 24 KGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHM 83
K D + L GH V + + LS S D +R+W ++G F GH
Sbjct: 47 KDDKAYGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAAGVSTRRFVGH- 104
Query: 84 AQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
+ L A+S + + +S D T++LW+
Sbjct: 105 TKDVLSVAFSLDNR---QIVSASRDRTIKLWN 133
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 26 DHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLS--TSSDATVRVWAASSGACVSVFDGHM 83
+H Q K L H V +W+PH LL S ++D +R W ++G ++ D
Sbjct: 327 NHSQQPILK-LTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSID--T 383
Query: 84 AQSALGAAWS 93
AWS
Sbjct: 384 GSQVCNLAWS 393
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 1.9
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 17 DVTGRSRKGDHGQLTTWKTLRGHKGTV--------FEASWNPHHDDLLLSTSSDATVRVW 68
D S + D L + L GH G+V F + + +L+S S D T+R+W
Sbjct: 505 DSPASSPRSDTDPLVYKQRLLGHTGSVLCLAAHRMFGDANGCNSSHVLISGSMDCTIRIW 564
Query: 69 AASSGACVSVFDGHMA 84
SG + + H+A
Sbjct: 565 DLESGNVIMIMHHHVA 580
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 37 RGHKGTVFEASWNPHH---DDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWS 93
+GH TV + +++ +L S SSD T+R W S VS D Q
Sbjct: 80 KGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFS---F 136
Query: 94 AYPQLATKALSGGGDHTLRLWD 115
+Y A L+GG + LWD
Sbjct: 137 SYGGAADNLLAGGCKEQVLLWD 158
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 39 HKGTVFEASWNPHHDDLLLST-SSDATVRVWAASSGACVSVFDGHMA 84
H G V + +++ + L ++T D T++VW A++G F+GH A
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEA 507
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 39 HKGTVFEASWNPHHDDLLLST-SSDATVRVWAASSGACVSVFDGHMA 84
H G V + +++ + L ++T D T++VW A++G F+GH A
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEA 507
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 32 TWKTLRGHKGTVFEASWNPHHDDLLLST-SSDATVRVW-AASSGACVSVFDGHM 83
T +TL GH F ++W+P D + ST + D T RVW + V+V G++
Sbjct: 311 TLETLSGHLDFSFASAWHP--DGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNL 362
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 49 NPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGD 108
NP +LLLS +D R+W + + + +A+ + P TK L+ D
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFS-PSSGTKILTTCQD 379
Query: 109 HTLRLWD 115
+ +R+WD
Sbjct: 380 NRIRIWD 386
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 30.3 bits (65), Expect = 3.3
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 417 DLSEAATVLAKSKKQENLCLAAEI-AKAAGRATLADHIEKKAQNTIPSTSDETEEILKEL 475
D + A +V + + ++ +I A+ +G TL +K + IP S + + + ++
Sbjct: 1052 DSANAESVASVESEYDDEAGGLQIDARRSGTVTLVREALEKILSEIPDNSSDDQSMDSDI 1111
Query: 476 PTKMELLLKQNNNSEDKA 493
T+ EL + + SE+K+
Sbjct: 1112 TTEQELFERNSQVSEEKS 1129
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 29 QLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG-ACVSVFDGH 82
+L +K L HKG V S+N D+L+S S D V +W G +S GH
Sbjct: 48 RLEIYKKLEKHKGCVNTVSFNA-EGDVLISGSDDRRVVLWDWQLGNVKLSFHSGH 101
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 24 KGDHGQLTTWKTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGHM 83
K D + L GH V + + LS S D +R+W ++G F GH
Sbjct: 47 KDDKSYGVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETTRRFVGH- 104
Query: 84 AQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
+ L A+S + + +S D T++LW+
Sbjct: 105 TKDVLSVAFSTDNR---QIVSASRDRTIKLWN 133
>At2g20320.1 68415.m02373 DENN (AEX-3) domain-containing protein
contains Pfam domain PF02141: DENN (AEX-3) domain
Length = 976
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 10 DKDANRTDVTGRSRKGDHGQLTTWKTLRGHK 40
++D R+ VT + + GD Q+T+WK GH+
Sbjct: 83 ERDGVRSPVTSKCKTGDE-QITSWKNENGHE 112
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLST-SSDATVRVW 68
+LRGHK F ++W+P + L+L+T + D R+W
Sbjct: 285 SLRGHKDYSFASAWHP--NGLILATGNQDTACRLW 317
>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 730
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 176 ILCKQALGCTDGLIR--RMFEKYGLKSSTSPFTIERVQASSGENIKCDG--VDNGL---- 227
+L KQ L DG + ++F L+ +T F+I+RV G+ G VD +
Sbjct: 398 LLLKQQLTTKDGNVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVK 457
Query: 228 NSEIIEENKGKDY 240
S++++E+K +++
Sbjct: 458 RSKVVDEDKMEEF 470
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 58 STSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMN 117
S D V W S+G + F GH + A + ++ +S G D +LR+WD
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGH--DGEVNAV--KFNDSSSVVVSAGFDRSLRVWDCR 132
Query: 118 DFPAE 122
E
Sbjct: 133 SHSVE 137
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 37 RGHKGTVFEASWNPHHDDLLLSTSSDATVRVW 68
R H V S++P +D +L++S D T+RVW
Sbjct: 267 RAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVW 297
>At4g36990.1 68417.m05241 heat shock factor protein 4 (HSF4) / heat
shock transcription factor 4 (HSTF4) identical to heat
shock transcription factor 4 (HSF4) SP:Q96320 from
[Arabidopsis thaliana]
Length = 284
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 200 SSTSPFTIERVQAS-SGENIKCDGVDNGLNSEIIEENKGKDYGADFIKIFGTIQEVNEVL 258
SS +P ++E + A SGEN K +N L+SE+ K +D F+ G ++ E +
Sbjct: 142 SSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAKKQRDELVTFLT--GHLKVRPEQI 199
Query: 259 DK 260
DK
Sbjct: 200 DK 201
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 29.9 bits (64), Expect = 4.4
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 57 LSTSSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWD 115
LS S D +R+W ++G F GH + L A+S + + +S D T++LW+
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGH-TKDVLSVAFSTDNR---QIVSASRDRTIKLWN 133
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 60 SSDATVRVWAASSGACVSVFDGHMAQSALGAAWSAYPQLATKALSGGGDHTLRLWDMND 118
S D T++ W+ G+ + GH + S + SG D T+RLW ++D
Sbjct: 604 SGDNTIKAWSLQDGSLLCTMSGHK------SVVSTLVVVNGVLYSGSWDGTVRLWSLSD 656
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to
gene PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFD-GH 82
K L HKG V S+N D+LLS S D V +W + + FD GH
Sbjct: 49 KKLDKHKGCVNTVSFNAD-GDILLSGSDDRQVILWDWQTASVKLSFDSGH 97
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 34 KTLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSG 73
+ L+GHKG V ++P + +LL S + TV W +G
Sbjct: 140 RVLKGHKGPVTGLDFHP-NGELLASIDTTGTVLCWELQNG 178
>At2g35350.1 68415.m04334 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 783
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 451 DHIEKKAQNTIPSTSDETEEILKELPTKMELL 482
DH+ + A ++ P+T E EE+ K L + +E++
Sbjct: 348 DHVNEMASSSCPATEKEEEEMGKRLTSSLEVV 379
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 35 TLRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAAS 71
+L GH+G V++ W+ L ST SD V++W ++
Sbjct: 275 SLSGHQGEVWQMEWD-MSGMTLASTGSDGMVKLWQSN 310
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVW-----AASSGACVSVFDGHMAQ-SALG 89
LRGH+ + + DL+LS S+D ++RVW +C++V +GH +L
Sbjct: 324 LRGHRKAIMCLAVA---SDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLA 380
Query: 90 AAWS---AYPQLATKALSGGGDHTLRLWDM 116
+ S + + SG D +L++W++
Sbjct: 381 VSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
>At3g54470.1 68416.m06026 uridine 5'-monophosphate synthase / UMP
synthase (PYRE-F) (UMPS) identical to SP|Q42586 Uridine
5'-monophosphate synthase (UMP synthase) [Includes:
Orotate phosphoribosyltransferase (EC 2.4.2.10)
(OPRtase); Orotidine 5'- phosphate decarboxylase (EC
4.1.1.23) (OMPdecase)] {Arabidopsis thaliana}
Length = 476
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 429 KKQENLCLAAEIAKAAGRATLADHI 453
KK+ NLCLAA++ AA +AD +
Sbjct: 240 KKETNLCLAADVGTAAELLDIADKV 264
>At2g39910.1 68415.m04905 expressed protein
Length = 436
Score = 29.1 bits (62), Expect = 7.7
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 36 LRGHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASS 72
LR KG FE++W+ + +D LST S +W +SS
Sbjct: 403 LRQCKGLRFESAWSQYQEDPNLSTVSQ---HIWTSSS 436
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 29.1 bits (62), Expect = 7.7
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 38 GHKGTVFEASWNPHHDDLLLSTSSDATVRVWAASSGACVSVFDGH 82
GHK V + +++ L S S+D+T+R+W V F GH
Sbjct: 547 GHKKAVSYVKFLSNNE--LASASTDSTLRLWDVKDNLPVRTFRGH 589
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 29.1 bits (62), Expect = 7.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 32 TWKTLRGHKGTVFEASWNPHHDDLLLST-SSDATVRVW 68
T TL GH F ++W+P D ST + D T RVW
Sbjct: 309 TLATLSGHLDFSFASAWHP--DGFTFSTGNQDKTCRVW 344
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,597,936
Number of Sequences: 28952
Number of extensions: 449129
Number of successful extensions: 1929
Number of sequences better than 10.0: 174
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 1446
Number of HSP's gapped (non-prelim): 506
length of query: 531
length of database: 12,070,560
effective HSP length: 84
effective length of query: 447
effective length of database: 9,638,592
effective search space: 4308450624
effective search space used: 4308450624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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