GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001281-TA|BGIBMGA001281-PA|IPR011046|WD40-like,
IPR001680|WD-40 repeat
         (532 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       28   0.54 
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          26   2.9  
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    25   3.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   3.8  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   5.0  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    25   6.7  

>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 28.3 bits (60), Expect = 0.54
 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 9/98 (9%)

Query: 223 DEIEDSNPKSSENLEASGMVKSLPEDSFDESVTVE-DDMFDIYKDHEADEFGHKKYQPEE 281
           DEI+D NPK  +N++    V   P    +E    + + M ++  D + D+   KK  P+ 
Sbjct: 158 DEIDDENPKFDKNIDDKEYVD--PTKIKEELAKKKMEAMNEVAADADLDDAKMKK-TPDS 214

Query: 282 IRVKIKPDLKQEDYLAECLKLKEQILRNKNETEESIES 319
           I    + D +Q + ++  L LK+  L ++ E  +++ES
Sbjct: 215 ID---RVDHEQPEKMS--LSLKKLGLDDEQEVMQAVES 247


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 25.8 bits (54), Expect = 2.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 301 KLKEQILRNKNETEESIESLVEALDKTH 328
           KLK ++ +   + E+  E+L E+LDK H
Sbjct: 35  KLKGEVEKQSKKLEKRKETLGESLDKNH 62


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 158 QGVIFVLDLNGQGKTIYKVRGQD 180
           QG I V+ LNG GK  ++  G D
Sbjct: 147 QGRILVIPLNGHGKCWFEPSGMD 169


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 202 ESDKRPSVSERLHKIRNEPEPDEIEDSNPKSSENLEASGMV-KSLPEDS--FDESVTVED 258
           E   R  ++ER  K   +P+ + +E    +++     +  + K L E      E     D
Sbjct: 271 EKHNRCKLAEREMKDLEKPKTEAVEYLKQENTLTRTRNQQIQKYLCEQKRKIGEFEVERD 330

Query: 259 DMFDIYKDHEADEFGHKKYQPEEIRVKIKPDLKQEDYLAECLKLKEQILRNKNETEESIE 318
               I   H+ + +   K +  E    +K ++KQ D L    + KE  L+N  +    ++
Sbjct: 331 QAAGILAKHD-ETYDALKAERVEKEKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQ 389

Query: 319 SLVEALDK 326
           + + A ++
Sbjct: 390 ANMRATNE 397


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 5.0
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 182 EIMTVSWCPQYEVV-IKKLLKESDKRPSVSERLHKIR 217
           E + +S C   E+  + K +K+SD   SV E + K+R
Sbjct: 118 EALLISDCTSEELAKLLKEMKQSDALKSVGETISKVR 154


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 24.6 bits (51), Expect = 6.7
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 75  IAQEFKINSTHSHEVHHNEKEEVTGVGYSNEQFAITVGSFGTVVKWDLKSNVVKNYQH 132
           +A    I ++HS  + H+    +  VG  +   AI   S  T+VK   +  ++K+ +H
Sbjct: 22  VANHGSIATSHS-SIQHHAAPAIHHVGSIHAAPAIYQHSAPTIVKTIAQPTIIKSVEH 78


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.133    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,055
Number of Sequences: 2123
Number of extensions: 23412
Number of successful extensions: 61
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 7
length of query: 532
length of database: 516,269
effective HSP length: 67
effective length of query: 465
effective length of database: 374,028
effective search space: 173923020
effective search space used: 173923020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)