Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001280-TA|BGIBMGA001280-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
         (145 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   2.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.6  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 6   DNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELI 50
           + ++L L++  +Y  R+  ++  SR+++ +K   I+   +  ELI
Sbjct: 344 EESKLSLDLL-SYVPREVYNKEISRLVETLKFQSITSAVVTYELI 387


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
          protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 7  NNRLCLNIAYAYTGRDE 23
          N  LC +I YA+ G D+
Sbjct: 48 NPDLCTHINYAFVGLDK 64


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 33  DGVKENKISPENIDEELISQS 53
           DG K  K+S + +D+E+  +S
Sbjct: 80  DGGKNGKLSDKFLDDEMSKKS 100


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 33 DGVKENKISPENIDEELISQS 53
          DG K  K+S + +D+E+  +S
Sbjct: 28 DGGKNGKLSDKFLDDEMSKKS 48


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query: 33  DGVKENKISPENIDEELISQS 53
           DG K  K+S + +D+E+  +S
Sbjct: 211 DGGKNGKLSDKFLDDEMSKKS 231


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query: 7   NNRLCLNIAYAYTGRD 22
           + RLC ++ YA+   D
Sbjct: 662 DQRLCTHVVYAFASLD 677


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,810
Number of Sequences: 317
Number of extensions: 1212
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 145
length of database: 114,650
effective HSP length: 51
effective length of query: 94
effective length of database: 98,483
effective search space:  9257402
effective search space used:  9257402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)