Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001280-TA|BGIBMGA001280-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(145 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|... 95 4e-21
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 31 0.070
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 27 0.86
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 27 1.5
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 27 1.5
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 26 2.0
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 2.0
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 25 4.6
SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces p... 25 6.1
SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyce... 25 6.1
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 25 6.1
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 24 8.0
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 24 8.0
SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydro... 24 8.0
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 24 8.0
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 24 8.0
>SPAC4D7.04c |||cis-prenyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 264
Score = 95.1 bits (226), Expect = 4e-21
Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 4 TKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEP---E 60
TK N + LN+ + YT R EI+ + I+ ++ I+PE+IDE++ ++L + + +
Sbjct: 151 TKHNTKATLNVCFPYTSRHEIATSVQSIVKMAEDGTITPEDIDEDIFEKNLLIKDSLPLD 210
Query: 61 LLVRTSGEVRLSDFMLWQI-SNTVLYFTDVLWPEFTIWNLLAAIIHFQ-RNAP 111
LL+RTSG RLSDFMLWQ NT + F D WP+F+IW +I +Q +N P
Sbjct: 211 LLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIWKFFPMLIQYQLQNQP 263
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 31.1 bits (67), Expect = 0.070
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 20 GRDEISRAASRIIDGVKENKISPENIDEELISQSLD---LGEPELLVRTSGEVRLSDFML 76
GRD I + D + IS + ELI + L + EP+LL+ + ++L F
Sbjct: 161 GRDAIIDLTRGLADLCTKKVISSTQVTLELIDKELKESVIPEPDLLIIFAPLLKLQGFPP 220
Query: 77 WQISNTVLYFTDVLWPEFTIWNLLAAIIHF 106
WQ+ ++ +L+ A++H+
Sbjct: 221 WQLRLCEIFHDPILYTT-NYLTFFKALVHY 249
>SPAPB8E5.07c |||ribosome biogenesis protein
Rrp12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1163
Score = 27.5 bits (58), Expect = 0.86
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 22 DEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPELL 62
+E+S A R++ ++++++ N EL S L + P+LL
Sbjct: 739 EELSSVADRVVSSTRKDRLASLNALYELQSSELVIAIPQLL 779
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 26.6 bits (56), Expect = 1.5
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 47 EELISQSLDLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFT-IWNLLAAI 103
EE + DLG+ ++LV+ +GE R D L Q+++ +++ T W + W + +I
Sbjct: 1428 EEWYGKFSDLGDGKVLVKLTGE-RSQDLKLIQVAD-LIFCTPSQWDSLSKRWRSMRSI 1483
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 26.6 bits (56), Expect = 1.5
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 22 DEISRAASRIIDGVKENKIS-------PENIDEELISQSLDLGEPEL 61
D SRA R +D + NKI+ PEN +ELI SLD G +
Sbjct: 2 DVNSRAKIRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSI 48
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 26.2 bits (55), Expect = 2.0
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 31 IIDGVKENK-ISPENID-EELISQSL-DLGEPELLVRTSGEVRLSDFMLWQISNTVLY 85
I+D +N I P+ D +E SQ D+ PE L+R + L + L QI NT L+
Sbjct: 820 IMDMASKNVFIKPQEFDHDEYFSQEEEDIYRPENLIRNHQILGLMEGSLEQIRNTDLF 877
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 2.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 98 NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQELTKYI 144
+L A QRN + TNET + ++FL Q R Q TK++
Sbjct: 133 SLSALATQAQRNVSKTLPQSTNETIEKLRQFL----QTRYQPATKFL 175
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.0 bits (52), Expect = 4.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 36 KENKISPENIDEELISQSLDLGEPELLVRTSGEVRLSDF 74
K+N + D LI+ SL EP + + +SG+V S++
Sbjct: 280 KDNGLVTVGFDNGLITFSLGRDEPSVTMDSSGKVVWSNY 318
>SPAC11E3.07 |vma4||V-type ATPase subunit E|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 227
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 22 DEISRAASRIIDGVKENKISPENIDEELISQSLD-LGEP 59
D+I + +DG+++ K + +LI Q+++ LGEP
Sbjct: 92 DDIFSRVEKKLDGIEQKKDAYTKFMADLIVQAMELLGEP 130
>SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 554
Score = 24.6 bits (51), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 96 IWNLLAAIIHFQRNAPPIKAEDTN 119
+WNL A+I F A P+ ++ N
Sbjct: 467 LWNLFTAVILFSPKAYPVTGKNFN 490
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 55 DLGEPELLVRTSGEVRLSDFMLWQISNT 82
DL +L+ SG + LSDF L + SN+
Sbjct: 320 DLKPENILLHESGHIMLSDFDLSKQSNS 347
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 24.2 bits (50), Expect = 8.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 55 DLGEPELLVRTSGEVRLSDFML 76
DL LL+ +GE++L+DF L
Sbjct: 198 DLKPSNLLMNNTGEIKLADFGL 219
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 24.2 bits (50), Expect = 8.0
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 21 RDEISRAASRIIDGVKENKISPENIDEELISQSLDL 56
R+E RAA+ + + +++++ N D ++ + LD+
Sbjct: 180 REEAERAATALREAELKHRLAQANADVDVANSKLDI 215
>SPBC1734.03 ||SPBC337.19|dihydropteroatesynthase/2-amino-4-hydroxy-
6-
hydroxymethyldihydropteridinediphosphokinase/dihydroneop
terinaldolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 24.2 bits (50), Expect = 8.0
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 5 KDNNRLCLNIAYAYTGRD--EISRAASRIID 33
++ R+CLNI++A T + EI+RA + ++
Sbjct: 151 QEKQRVCLNISFANTEVEALEIARAIAEYVE 181
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 24.2 bits (50), Expect = 8.0
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 42 PENIDEELISQSLDLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLA 101
P D E +L + P L + VRL F+ + ++ L W +F I +
Sbjct: 81 PSQFDNEQFLNALAVLFPRLSIEVERHVRLKIFVFMSVLSSALQKKLAPWLKFYITPWVM 140
Query: 102 AIIHFQRNAPPIKAEDT 118
R A + A+D+
Sbjct: 141 GFFDSDR-AVSVSAKDS 156
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 24.2 bits (50), Expect = 8.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 37 ENKISPENIDEELISQSLDLGEPELLV 63
EN ++ EN D + +S+SLD L V
Sbjct: 433 ENYLTQENFDSDNLSESLDNSVENLTV 459
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,321
Number of Sequences: 5004
Number of extensions: 26540
Number of successful extensions: 101
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 90
Number of HSP's gapped (non-prelim): 17
length of query: 145
length of database: 2,362,478
effective HSP length: 67
effective length of query: 78
effective length of database: 2,027,210
effective search space: 158122380
effective search space used: 158122380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)
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