Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001280-TA|BGIBMGA001280-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(145 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL513365-7|CAI21495.1| 334|Homo sapiens dehydrodolichyl diphosp... 118 6e-27
AL513365-3|CAI21491.1| 161|Homo sapiens dehydrodolichyl diphosp... 116 2e-26
BC003643-1|AAH03643.1| 333|Homo sapiens dehydrodolichyl diphosp... 116 4e-26
AL513365-4|CAI21492.1| 240|Homo sapiens dehydrodolichyl diphosp... 116 4e-26
AB090852-1|BAC57588.1| 333|Homo sapiens dehydrodolichyl diphosp... 116 4e-26
AK023164-1|BAB14439.1| 334|Homo sapiens protein ( Homo sapiens ... 115 5e-26
BC004117-1|AAH04117.1| 294|Homo sapiens DHDDS protein protein. 108 6e-24
AL513365-8|CAI21496.1| 216|Homo sapiens dehydrodolichyl diphosp... 108 8e-24
AL513365-9|CAI21497.1| 222|Homo sapiens dehydrodolichyl diphosp... 72 9e-13
BC034152-1|AAH34152.1| 124|Homo sapiens Similar to hypothetical... 65 8e-11
AL513365-5|CAI21493.1| 169|Homo sapiens dehydrodolichyl diphosp... 44 1e-04
AL513365-6|CAI21494.1| 155|Homo sapiens dehydrodolichyl diphosp... 39 0.006
AL513365-10|CAI21498.1| 209|Homo sapiens dehydrodolichyl diphos... 39 0.007
X14298-1|CAA32479.1| 3685|Homo sapiens protein ( Human mRNA for ... 30 3.5
M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein. 30 3.5
BC127103-1|AAI27104.2| 1225|Homo sapiens DMD protein protein. 30 3.5
AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular dy... 30 3.5
AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular dy... 30 3.5
AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular dy... 30 3.5
AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular dy... 30 3.5
AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular dy... 30 3.5
AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular dy... 30 3.5
AB208836-1|BAD92073.1| 1392|Homo sapiens dystrophin Dp427c isofo... 30 3.5
X66365-1|CAA47008.1| 326|Homo sapiens serine/threonine protein ... 29 6.0
BC052264-1|AAH52264.1| 326|Homo sapiens cyclin-dependent kinase... 29 6.0
AY128534-1|AAM76970.1| 326|Homo sapiens cyclin-dependent kinase... 29 6.0
>AL513365-7|CAI21495.1| 334|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 334
Score = 118 bits (285), Expect = 6e-27
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---P 59
ATK+ N+ LN+ +AYT R EIS A + GV++ + P +I E L+ + L P
Sbjct: 141 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHP 200
Query: 60 ELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPIKAEDTN 119
++L+RTSGEVRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N ++ + +
Sbjct: 201 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQQKARD 260
Query: 120 ETAHEKK 126
A E+K
Sbjct: 261 MYAEERK 267
>AL513365-3|CAI21491.1| 161|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 161
Score = 116 bits (280), Expect = 2e-26
Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 3/129 (2%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---P 59
ATK+ N+ LN+ +AYT R EIS A + GV++ + P +I E L+ + L P
Sbjct: 17 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHP 76
Query: 60 ELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPIKAEDTN 119
++L+RTSGEVRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N ++ +
Sbjct: 77 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQHPGSL 136
Query: 120 ETAHEKKEF 128
T KK F
Sbjct: 137 LTKAWKKPF 145
>BC003643-1|AAH03643.1| 333|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 333
Score = 116 bits (278), Expect = 4e-26
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---P 59
ATK+ N+ LN+ +AYT R EIS A + GV++ + P +I E L+ + L P
Sbjct: 141 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHP 200
Query: 60 ELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI-KAED 117
++L+RTSGEVRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N + KA D
Sbjct: 201 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSMLQKARD 259
>AL513365-4|CAI21492.1| 240|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 240
Score = 116 bits (278), Expect = 4e-26
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---P 59
ATK+ N+ LN+ +AYT R EIS A + GV++ + P +I E L+ + L P
Sbjct: 48 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHP 107
Query: 60 ELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI-KAED 117
++L+RTSGEVRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N + KA D
Sbjct: 108 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARD 166
>AB090852-1|BAC57588.1| 333|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 333
Score = 116 bits (278), Expect = 4e-26
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---P 59
ATK+ N+ LN+ +AYT R EIS A + GV++ + P +I E L+ + L P
Sbjct: 141 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHP 200
Query: 60 ELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI-KAED 117
++L+RTSGEVRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N + KA D
Sbjct: 201 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARD 259
>AK023164-1|BAB14439.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ13102 fis, clone NT2RP3002303, weakly similar to
PROBABLE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE (EC
2.5.1.31). ).
Length = 334
Score = 115 bits (277), Expect = 5e-26
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 3/127 (2%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---P 59
ATK+ N+ L + +AYT R EIS A + GV++ + P +I E L+ + L P
Sbjct: 141 ATKNYNKCFLYVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHP 200
Query: 60 ELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPIKAEDTN 119
++L+RTSGEVRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N ++ + +
Sbjct: 201 DILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSMLQQKARD 260
Query: 120 ETAHEKK 126
A E+K
Sbjct: 261 MYAEERK 267
>BC004117-1|AAH04117.1| 294|Homo sapiens DHDDS protein protein.
Length = 294
Score = 108 bits (260), Expect = 6e-24
Identities = 53/110 (48%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 12 LNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---PELLVRTSGE 68
LN+ +AYT R EIS A + GV++ + P +I E L+ + L P++L+RTSGE
Sbjct: 111 LNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGE 170
Query: 69 VRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI-KAED 117
VRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N + KA D
Sbjct: 171 VRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARD 220
>AL513365-8|CAI21496.1| 216|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 216
Score = 108 bits (259), Expect = 8e-24
Identities = 50/101 (49%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 12 LNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGE---PELLVRTSGE 68
LN+ +AYT R EIS A + GV++ + P +I E L+ + L P++L+RTSGE
Sbjct: 111 LNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGE 170
Query: 69 VRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRN 109
VRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N
Sbjct: 171 VRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMN 211
>AL513365-9|CAI21497.1| 222|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 222
Score = 71.7 bits (168), Expect = 9e-13
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISP---ENIDEELISQSLDLGE- 58
ATK+ N+ LN+ +AYT R EIS A + GV++ + P ++I E L+ + L
Sbjct: 141 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPRYPDDISESLLDKCLYTNRS 200
Query: 59 --PELLVRTSGEVRLSDFMLWQ 78
P++L+RTSGEVRLSDF+LWQ
Sbjct: 201 PHPDILIRTSGEVRLSDFLLWQ 222
>BC034152-1|AAH34152.1| 124|Homo sapiens Similar to hypothetical
protein FLJ13102 protein.
Length = 124
Score = 65.3 bits (152), Expect = 8e-11
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 69 VRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI-KAEDTNETAHEKKE 127
VRLSDF+LWQ S++ L F VLWPE+T WNL AI+ FQ N + KA D A E+K
Sbjct: 1 VRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARDM--YAEERKR 58
Query: 128 FLKYLEQRRAQE 139
+ LE+ +A E
Sbjct: 59 --QQLERDQATE 68
>AL513365-5|CAI21493.1| 169|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 169
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 31 IIDGVKENKISPENIDEELISQSLDLGE---PELLVRTSGEVRLSDFMLWQ 78
I V+ K +I E L+ + L P++L+RTSGEVRLSDF+LWQ
Sbjct: 40 IAQAVQATKNYNNDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQ 90
>AL513365-6|CAI21494.1| 155|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 155
Score = 39.1 bits (87), Expect = 0.006
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQ-SLDL 56
ATK+ N+ LN+ +AYT R EIS A + GV++ + P I Q SL+L
Sbjct: 98 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSRDRFHHIGQASLEL 152
>AL513365-10|CAI21498.1| 209|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 209
Score = 38.7 bits (86), Expect = 0.007
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISP 42
ATK+ N+ LN+ +AYT R EIS A + GV++ + P
Sbjct: 141 ATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDP 180
>X14298-1|CAA32479.1| 3685|Homo sapiens protein ( Human mRNA for
dystrophin. ).
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>M18533-1|AAA53189.1| 3685|Homo sapiens dystrophin protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>BC127103-1|AAI27104.2| 1225|Homo sapiens DMD protein protein.
Length = 1225
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 19 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 66
>AL451144-4|CAI39566.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>AL139278-1|CAI42991.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>AL109609-3|CAI42950.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>AL096699-2|CAI42225.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>AL031643-3|CAI43058.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>AL031542-2|CAI42229.1| 3685|Homo sapiens dystrophin (muscular
dystrophy, Duchenne and Becker types) protein.
Length = 3685
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 2479 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 2526
>AB208836-1|BAD92073.1| 1392|Homo sapiens dystrophin Dp427c isoform
variant protein.
Length = 1392
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 91 WPEFTIW-NLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQ 138
W E T W +LL +I QR ED NE ++K ++ LEQRR Q
Sbjct: 181 WTELTDWLSLLDQVIKSQRVMVG-DLEDINEMIIKQKATMQDLEQRRPQ 228
>X66365-1|CAA47008.1| 326|Homo sapiens serine/threonine protein
kinase protein.
Length = 326
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 55 DLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI 113
DL +LV +SG+++L+DF L +I + + T V+ T+W ++ A P+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPEVLLQSSYATPV 200
>BC052264-1|AAH52264.1| 326|Homo sapiens cyclin-dependent kinase 6
protein.
Length = 326
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 55 DLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI 113
DL +LV +SG+++L+DF L +I + + T V+ T+W ++ A P+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPEVLLQSSYATPV 200
>AY128534-1|AAM76970.1| 326|Homo sapiens cyclin-dependent kinase 6
protein.
Length = 326
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 55 DLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPI 113
DL +LV +SG+++L+DF L +I + + T V+ T+W ++ A P+
Sbjct: 145 DLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLWYRAPEVLLQSSYATPV 200
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,144,482
Number of Sequences: 224733
Number of extensions: 758461
Number of successful extensions: 2634
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2612
Number of HSP's gapped (non-prelim): 26
length of query: 145
length of database: 73,234,838
effective HSP length: 83
effective length of query: 62
effective length of database: 54,581,999
effective search space: 3384083938
effective search space used: 3384083938
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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