Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001280-TA|BGIBMGA001280-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(145 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical pr... 102 9e-23
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 31 0.32
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 31 0.32
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 31 0.32
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z68303-11|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 29 1.7
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 27 4.0
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 27 4.0
Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical pr... 27 7.0
>Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical
protein T01G1.4 protein.
Length = 299
Score = 102 bits (245), Expect = 9e-23
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 12 LNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLG----EPELLVRTSG 67
LN+ YT RDEI+R+ I VK+ K++ + I+E +I LD G P+L +RTSG
Sbjct: 162 LNVCMPYTSRDEIARSFETIRKHVKDGKVNVDEINESMIDACLDSGCGGTSPDLFIRTSG 221
Query: 68 EVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQ 107
E RLSDF++WQ S T +YF DVLWPEF +NL AI+++Q
Sbjct: 222 EHRLSDFLMWQASETHVYFDDVLWPEFGYFNLCKAILNYQ 261
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.32
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 76 LWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP-IKAEDTNETAHEKKEFLKYLEQ 134
+W + T + + P F++ N ++A+ H +N PP + DT+E EF++++++
Sbjct: 210 IWSLGITCIELAERRPPLFSM-NAMSALYHIAQNDPPTLSPIDTSEQPEWSLEFVQFIDK 268
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 31.1 bits (67), Expect = 0.32
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 76 LWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP-IKAEDTNETAHEKKEFLKYLEQ 134
+W + T + + P F++ N ++A+ H +N PP + DT+E EF++++++
Sbjct: 210 IWSLGITCIELAERRPPLFSM-NAMSALYHIAQNDPPTLSPIDTSEQPEWSLEFVQFIDK 268
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 31.1 bits (67), Expect = 0.32
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 76 LWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP-IKAEDTNETAHEKKEFLKYLEQ 134
+W + T + + P F++ N ++A+ H +N PP + DT+E EF++++++
Sbjct: 210 IWSLGITCIELAERRPPLFSM-NAMSALYHIAQNDPPTLSPIDTSEQPEWSLEFVQFIDK 268
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 14 IAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPEL 61
++ +Y EISR+ +R + +K+S + + ++ QS++ GE E+
Sbjct: 372 VSRSYHAITEISRSTARAVLNADNSKLSIQQSETVVVQQSIEDGEMEV 419
>Z68303-11|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 92 PEFTIWNLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQELTKYIS 145
P T+ ++LAA+ H R + + + E KEF +YL R Q +T ++
Sbjct: 575 PNATLISILAAVRHGDRFGLYTGGKCSELSEQEAKEFEEYLTVSRGQNITSRLN 628
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 92 PEFTIWNLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRAQELTKYIS 145
P T+ ++LAA+ H R + + + E KEF +YL R Q +T ++
Sbjct: 575 PNATLISILAAVRHGDRFGLYTGGKCSELSEQEAKEFEEYLTVSRGQNITSRLN 628
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 27.5 bits (58), Expect = 4.0
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 1 MLATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPE 60
M+ K++ ++ Y+ DE+ ++ GV+E+K+S + L+ G
Sbjct: 585 MVKAKNSQSAPVSARSGYSQYDEVEADTVSLMQGVREHKLSQAALSAS--DDGLNAGISP 642
Query: 61 LLVRTSGEVRLSDFMLWQISNTVLYFTDVLWP 92
VRTS E + +M + V + D+L P
Sbjct: 643 NNVRTSEESVNTSYM---SQSVVFDYPDILRP 671
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 27.5 bits (58), Expect = 4.0
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 1 MLATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPE 60
M+ K++ ++ Y+ DE+ ++ GV+E+K+S + L+ G
Sbjct: 585 MVKAKNSQSAPVSARSGYSQYDEVEADTVSLMQGVREHKLSQAALSAS--DDGLNAGISP 642
Query: 61 LLVRTSGEVRLSDFMLWQISNTVLYFTDVLWP 92
VRTS E + +M + V + D+L P
Sbjct: 643 NNVRTSEESVNTSYM---SQSVVFDYPDILRP 671
>Z81595-2|CAB04749.1| 527|Caenorhabditis elegans Hypothetical
protein T22H2.2 protein.
Length = 527
Score = 26.6 bits (56), Expect = 7.0
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 2 LATKDNNRLCLNIAYAYTGR-DEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPE 60
L T D+N+ + + ++ R D + A ++ G+ P ++D +I + +G
Sbjct: 196 LLTDDDNKDVSSKSNTHSERCDPTTIIAYLLLTGLVLITSLPTSLDASVIRPLVTIGTGC 255
Query: 61 LLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNL 99
L++ + LS+ +L I + + WP ++ W L
Sbjct: 256 LMLISEDNAVLSNRVLTYIGDISYSLYLIHWPIYSYWKL 294
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,529,080
Number of Sequences: 27539
Number of extensions: 135412
Number of successful extensions: 443
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 440
Number of HSP's gapped (non-prelim): 10
length of query: 145
length of database: 12,573,161
effective HSP length: 75
effective length of query: 70
effective length of database: 10,507,736
effective search space: 735541520
effective search space used: 735541520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -