Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001280-TA|BGIBMGA001280-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(145 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58770.1 68418.m07361 dehydrodolichyl diphosphate synthase, p... 91 3e-19
At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase, p... 87 4e-18
At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase, p... 82 2e-16
At5g58784.1 68418.m07364 dehydrodolichyl diphosphate synthase, p... 80 5e-16
At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase / ... 79 9e-16
At2g23400.1 68415.m02794 dehydrodolichyl diphosphate synthase, p... 70 5e-13
At2g17570.1 68415.m02033 undecaprenyl pyrophosphate synthetase f... 69 9e-13
At5g60510.1 68418.m07588 undecaprenyl pyrophosphate synthetase f... 67 5e-12
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 65 2e-11
At1g28130.1 68414.m03446 auxin-responsive GH3 family protein sim... 32 0.13
At2g33160.1 68415.m04063 glycoside hydrolase family 28 protein /... 29 1.2
At2g05090.1 68415.m00534 hypothetical protein includes At5g37080... 29 1.6
At3g11240.1 68416.m01367 arginine-tRNA-protein transferase, puta... 28 2.9
At2g36660.1 68415.m04496 polyadenylate-binding protein, putative... 28 2.9
At5g55990.1 68418.m06986 calcineurin B-like protein 2 (CBL2) ide... 27 5.0
At5g43300.1 68418.m05292 glycerophosphoryl diester phosphodieste... 27 5.0
At2g30070.1 68415.m03658 potassium transporter (KUP1) identical ... 27 5.0
At1g78480.1 68414.m09147 prenyltransferase/squalene oxidase repe... 27 5.0
At5g05700.1 68418.m00627 arginine-tRNA-protein transferase 1 / a... 27 6.6
At3g05937.1 68416.m00674 expressed protein no suitable start cod... 27 6.6
At2g47860.1 68415.m05973 phototropic-responsive NPH3 family prot... 27 6.6
At2g35840.2 68415.m04401 sucrose-phosphatase 1 (SPP1) identical ... 27 6.6
At2g35840.1 68415.m04400 sucrose-phosphatase 1 (SPP1) identical ... 27 6.6
At5g42130.1 68418.m05129 mitochondrial substrate carrier family ... 26 8.7
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 26 8.7
At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase fa... 26 8.7
At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit, c... 26 8.7
>At5g58770.1 68418.m07361 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 310
Score = 91.1 bits (216), Expect = 3e-19
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 4 TKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLG-----E 58
TK+N RL L +A Y+G+ ++ +A I VK+ +I E IDE LI + L+
Sbjct: 191 TKNNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELETNCTEFPY 250
Query: 59 PELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
P+LL+RTSGE+R+S+F+LWQ++ T L+F LWP+F + A++ FQ+
Sbjct: 251 PDLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQQ 300
>At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 302
Score = 87.0 bits (206), Expect = 4e-18
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSL-----DLG 57
AT+ + L +A Y+GR +I RA I+ ++ I E++DE LI + L +
Sbjct: 183 ATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEFP 242
Query: 58 EPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
P+LL+RTSGE R+S+F LWQ++ T L+F+ VLWP+F LL A++ +QR
Sbjct: 243 SPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQR 293
>At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 289
Score = 81.8 bits (193), Expect = 2e-16
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSL-----DLG 57
ATK + L +A Y+GR +I A I+ ++ I E++DE L + L +
Sbjct: 170 ATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFP 229
Query: 58 EPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
P+LL+RTSGE R+S+F LWQ++ T +F+ VLWP+F + A++ +QR
Sbjct: 230 SPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQR 280
>At5g58784.1 68418.m07364 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 244
Score = 80.2 bits (189), Expect = 5e-16
Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDE-----ELISQSLDLG 57
ATK L IA Y+GR +I +A + + VK+ I E+I+E EL+++ +
Sbjct: 125 ATKSYEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSEFP 184
Query: 58 EPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
P+LL+RTSGE R+S+F LWQ + T LYF VLWP+F L A+ +Q+
Sbjct: 185 NPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWYQQ 235
>At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase /
DEDOL-PP synthase (DPS) identical to dehydrodolichyl
diphosphate synthase [Arabidopsis thaliana] GI:7960765
Length = 303
Score = 79.4 bits (187), Expect = 9e-16
Identities = 41/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 3 ATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSL-----DLG 57
ATK L +A Y+G+ +I A ++ ++ I E++DE LI + L D
Sbjct: 184 ATKGYKNKHLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFP 243
Query: 58 EPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
P+L++RTSGE R+S+F LWQ++ + L+F+ V WP+F LL A+ +QR
Sbjct: 244 SPDLMIRTSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQR 294
>At2g23400.1 68415.m02794 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076; this may be a pseudogene.
Length = 253
Score = 70.1 bits (164), Expect = 5e-13
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 35 VKENKISPENIDEELISQSLDLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEF 94
++E + I+ EL++ D P+L++RTSGE R+S+F LWQ++ T L+++ VLWP+F
Sbjct: 171 IREEDVDEALIERELLTNCSDFPSPDLMIRTSGEQRISNFFLWQLAYTELFYSPVLWPDF 230
Query: 95 TIWNLLAAIIHFQ 107
LL A+ +Q
Sbjct: 231 DKDKLLEALASYQ 243
>At2g17570.1 68415.m02033 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to dehydrodolichyl diphosphate
synthetase (DEDOL-PP synthase) [GI:796076] and S.
cerevisiae Rer2 [SP|P35196]
Length = 295
Score = 69.3 bits (162), Expect = 9e-13
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 23/132 (17%)
Query: 1 MLATKDNNRLCLNIAYAYTGRDEISRAASRII----DGVKENKISPENIDEELIS----- 51
M AT N+R+ L I AY DEI +A + D ++ + E+ D ++
Sbjct: 153 MKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTDMEN 212
Query: 52 -----QSLDLGE---------PELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIW 97
Q +D+ E P++L+R+SGE RLS+F+LWQ NT L LWPE +
Sbjct: 213 QEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLR 272
Query: 98 NLLAAIIHFQRN 109
+LL AI++FQRN
Sbjct: 273 HLLWAILNFQRN 284
>At5g60510.1 68418.m07588 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 272
Score = 66.9 bits (156), Expect = 5e-12
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 1 MLATKDNNRLCLNIAYAYTGRDEISRAA-------SRIIDGVKENKISPENIDEELISQS 53
M T++N L + + AY+ EI A S+ DG ++S +I+E + +
Sbjct: 150 MELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELS--DIEECMYTSV 207
Query: 54 LDLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
+ + P+L+VRT G RLS+FM WQ S +L+ T+ LWPE +W+L+ AI+ FQR
Sbjct: 208 VPV--PDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQR 260
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 64.9 bits (151), Expect = 2e-11
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 1 MLATKDNNRLCLNIAYAYTGRDEISRAASRIIDGVKENK---ISPENIDEELISQSLDLG 57
M T++N L + + AY+ EI A + N + E D E + +
Sbjct: 149 MELTEENRDLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVLLELSDVEECMYTSIVP 208
Query: 58 EPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQR 108
P+L++RT G RLS+FM WQ S ++L+ T+ LWPE +W+L+ AI+ FQR
Sbjct: 209 VPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLWHLVWAILKFQR 259
>At1g28130.1 68414.m03446 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 609
Score = 32.3 bits (70), Expect = 0.13
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 6 DNNRLCLNIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPELLVRT 65
D N+ D++ RI DG + +S + I E L S G+P+L+ T
Sbjct: 54 DKNQQSFKNKVPVVNYDDVKPFIQRIADGESSDIVSAQPITELLTSSGTSAGKPKLMPST 113
Query: 66 SGEVRLSDF 74
+ E+ F
Sbjct: 114 AEELERKTF 122
>At2g33160.1 68415.m04063 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Salix gilgiana] GI:6714524; contains
Pfam profile PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 664
Score = 29.1 bits (62), Expect = 1.2
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 13 NIAYAYTGRDEISRAASRIIDGVKENKISPENIDEELISQSLDLGEPELLVRTSGEVRLS 72
NI Y GRD + A + G KI P N L S + + T +
Sbjct: 370 NINLHYVGRDGLVTALCENVGGSIRGKIVPANCRINLFLPSNIITDSN---STLEDKMQG 426
Query: 73 DFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPP 112
F L + T + LW + +WN I++FQR P
Sbjct: 427 IFQLANTTQTQRFHQLPLWILWRLWN-SRNILYFQRRHVP 465
>At2g05090.1 68415.m00534 hypothetical protein includes At5g37080,
At5g37170, At2g05090
Length = 572
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 33 DGVKENKISPENIDEELISQSLDLGEPELLVRTSGEVRLSDFMLWQISNTVLYFTDVLWP 92
+G+K EN+ +++ Q + +G+ + +V + + +F + +SN +L T LW
Sbjct: 123 EGIKTESYD-ENVLIDILGQVVSVGKVDEIVAQNKPNKKLEFQIRDVSNELLSCT--LWG 179
Query: 93 EFT--IWNLLAAIIHFQRNAPPIKAEDTNETAHE 124
F +++ L ++ H Q+ I+ N E
Sbjct: 180 VFAEKVFSALKSVKHDQKTVVLIRYAKINNFKSE 213
>At3g11240.1 68416.m01367 arginine-tRNA-protein transferase,
putative / arginyltransferase, putative /
arginyl-tRNA-protein transferase, putative similar to
SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC
2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
(Arginyl-tRNA--protein transferase 1) {Arabidopsis
thaliana}; contains Pfam profiles PF04377:
Arginine-tRNA-protein transferase C terminus, PF04376:
Arginine-tRNA-protein transferase N terminus
Length = 605
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 35 VKENKISPENIDEELISQSLDLGE 58
V+EN++SPE + E+L+S +GE
Sbjct: 235 VEENRLSPEAVSEKLLSAMNKVGE 258
>At2g36660.1 68415.m04496 polyadenylate-binding protein, putative /
PABP, putative
Length = 609
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 5 KDNNRLCLNIAYAYTGRDEISRAASRIIDGVK 36
KD NRLC A+ E +R A+ ++G K
Sbjct: 234 KDENRLCRGYAFVNFDNPEDARRAAETVNGTK 265
>At5g55990.1 68418.m06986 calcineurin B-like protein 2 (CBL2)
identical to calcineurin B-like protein 2 GI:3309084
from [Arabidopsis thaliana]
Length = 226
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 29 SRIIDGVKENKISPEN-IDEELISQSLDLGEPELLVR 64
S+ +DG+K S D +L QS LG+PELL R
Sbjct: 2 SQCVDGIKHLCTSVLGCFDLDLYKQSGGLGDPELLAR 38
>At5g43300.1 68418.m05292 glycerophosphoryl diester
phosphodiesterase family protein contains Pfam profile
PF03009: Glycerophosphoryl diester phosphodiesterase
family
Length = 333
Score = 27.1 bits (57), Expect = 5.0
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 7 NNRLCLNIAYAYTGRDEISRAASRIIDGVKEN-KISPENIDEELISQ-SLDLGEPELLVR 64
N + C + + G EI + R + + E K+ E+ + L+S+ L P + R
Sbjct: 184 NMQRCYPVFFLTNGGCEIYKDVRR--NSLDEAIKLCKESGLQGLVSEVKAILRTPNAITR 241
Query: 65 TSGEVRLSDFMLWQISNTV--LYFTDVLWPEFTIWNLLAAIIHFQRNAPPIKAEDTNETA 122
+ +LS Q++N V +Y ++ E I +++ I N + ED E
Sbjct: 242 VK-DSKLSLLSYGQLNNVVEVIYLQYLMGVEGVIVDMVKDISEAIANIE-VTNEDDCEGE 299
Query: 123 HEKKEFLKYLEQRRAQELTK 142
E+K +++ E+R+ E+TK
Sbjct: 300 DERKCLIRFGEERKKVEITK 319
>At2g30070.1 68415.m03658 potassium transporter (KUP1) identical to
potassium transporter [Arabidopsis thaliana]
gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
member, PMID:11500563
Length = 712
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 99 LLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKYLEQRRA 137
L++AI+ F P ++ E+ + +K+E ++ +E + A
Sbjct: 615 LVSAIVEFVETEPGLEEEEMSSVRRKKEECMEIMEAKEA 653
>At1g78480.1 68414.m09147 prenyltransferase/squalene oxidase
repeat-containing protein similar to beta-Amyrin
Synthase GI:3688600 from [Panax ginseng]
Length = 202
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 72 SDFMLWQISNTVLYFTDVLWPEFTIWNLLAAIIHFQRNAPPIKAEDTNETAHEKKEFLKY 131
S F+L+ + N F ++ + T+ + ++ PP+K ED T HE + ++Y
Sbjct: 18 SFFLLFFLFNAKNVFI-LISVDLTVGTVFELEAKVEQVIPPVKVEDGESTTHETRR-MRY 75
Query: 132 LEQRRAQELTK 142
E+ + L +
Sbjct: 76 GEEFLSSRLCR 86
>At5g05700.1 68418.m00627 arginine-tRNA-protein transferase 1 /
arginyltransferase 1 / arginyl-tRNA-protein transferase
1 (ATE1) identical to SP|Q9ZT48 Arginine-tRNA-protein
transferase 1 (EC 2.3.2.8) (R-transferase 1)
(Arginyltransferase 1) (Arginyl-tRNA--protein
transferase 1) {Arabidopsis thaliana}
Length = 632
Score = 26.6 bits (56), Expect = 6.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 13 NIAYAYTGR-DEISRAASRIIDGVKENKISPENIDEELISQSLDLGE-PELLVR 64
NIA+ I + I+ + N++SPE I E L+S +GE P++ ++
Sbjct: 207 NIAFPIAAAIKRIQTSEKEGINSAEGNRLSPETISEMLLSAMHKVGETPDVSIK 260
>At3g05937.1 68416.m00674 expressed protein no suitable start codon
was identified.
Length = 205
Score = 26.6 bits (56), Expect = 6.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 107 QRNAPPIKAEDTNETAHEKKEFLKYLEQRR 136
++ P+KAE + T+ K + KYL+Q+R
Sbjct: 3 KKRETPLKAERESSTSKGKSQARKYLKQQR 32
>At2g47860.1 68415.m05973 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 635
Score = 26.6 bits (56), Expect = 6.6
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 12/111 (10%)
Query: 1 MLATKDNNRLCLNIAYAYTGRDEISRAASRIIDGV----KENKISPENIDEELISQSLDL 56
+L +KD N LN+A A G E A++ GV + I+ + + DL
Sbjct: 68 VLESKDTN---LNLA-AVPGGSESFELAAKFCYGVGVQYNSSNIAALRCVAHYLEMTEDL 123
Query: 57 GEPELLVRTSGEVRLSDFMLWQISN--TVLYFTDVLWPEFTIWNLLAAIIH 105
E L RT E L D + ISN TVL+ + L P NL+ +++
Sbjct: 124 SEKNLEART--EAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVN 172
>At2g35840.2 68415.m04401 sucrose-phosphatase 1 (SPP1) identical to
sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
GI:11127757
Length = 422
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 109 NAPPIKAEDTNETAHEKKEFLKYLEQRRAQELTKYIS 145
N P +K + E K F Y+E+ +AQE+TK +S
Sbjct: 113 NFPELKLQAETEQRPHKVSF--YVEKSKAQEVTKELS 147
>At2g35840.1 68415.m04400 sucrose-phosphatase 1 (SPP1) identical to
sucrose-phosphatase (SPP1) [Arabidopsis thaliana]
GI:11127757
Length = 422
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 109 NAPPIKAEDTNETAHEKKEFLKYLEQRRAQELTKYIS 145
N P +K + E K F Y+E+ +AQE+TK +S
Sbjct: 113 NFPELKLQAETEQRPHKVSF--YVEKSKAQEVTKELS 147
>At5g42130.1 68418.m05129 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 412
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 105 HFQRNAPPIKAEDTNETAHEK--KEFLKYLE 133
+F+R+ PP + ++ HEK EFLK+++
Sbjct: 62 NFRRSDPPFASTSISDPTHEKPGPEFLKWIK 92
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 113 IKAEDTNETAHEKK-EFLKYLEQRRAQEL 140
+KAE+ AHEKK LK L+QR A+ +
Sbjct: 504 VKAEEKLRLAHEKKLRKLKRLDQRGAEAI 532
>At2g31830.1 68415.m03887 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 4
WD-40 repeats (PF00400);similar to SP:Q01968 Inositol
polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.-)(Lowe's
oculocerebrorenal syndrome protein) (SP:Q01968) [Homo
sapiens]
Length = 1144
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 23 EISRAASRIIDGVKENKISPENIDEEL 49
E S + IDG+++N +S E+ D+E+
Sbjct: 1046 EDSHNSEEFIDGIQQNSLSEESSDKEV 1072
>At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit,
component I-2 (ASA2) identical to SP|P32069
Length = 621
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 92 PEFTIWNLLAA--IIHFQRNAPPIKAEDTNETAHEKKEFLKY 131
P T NL+A ++HF R P IK T +++F K+
Sbjct: 44 PPATSLNLVAGSKLLHFSRRLPSIKCSYTPSLDLSEEQFTKF 85
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.133 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,362,712
Number of Sequences: 28952
Number of extensions: 127854
Number of successful extensions: 412
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 391
Number of HSP's gapped (non-prelim): 28
length of query: 145
length of database: 12,070,560
effective HSP length: 75
effective length of query: 70
effective length of database: 9,899,160
effective search space: 692941200
effective search space used: 692941200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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