Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001279-TA|BGIBMGA001279-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(109 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g17570.1 68415.m02033 undecaprenyl pyrophosphate synthetase f... 107 2e-24
At5g60510.1 68418.m07588 undecaprenyl pyrophosphate synthetase f... 98 1e-21
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f... 94 2e-20
At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase / ... 77 3e-15
At2g23400.1 68415.m02794 dehydrodolichyl diphosphate synthase, p... 74 2e-14
At5g58784.1 68418.m07364 dehydrodolichyl diphosphate synthase, p... 73 6e-14
At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase, p... 71 1e-13
At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase, p... 69 9e-13
At5g58770.1 68418.m07361 dehydrodolichyl diphosphate synthase, p... 67 2e-12
At3g53800.1 68416.m05944 armadillo/beta-catenin repeat family pr... 29 0.51
At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 28 1.2
At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein si... 28 1.6
At3g18550.1 68416.m02359 TCP family transcription factor, putati... 28 1.6
At3g48080.1 68416.m05242 lipase class 3 family protein / disease... 27 2.1
At4g21380.1 68417.m03089 S-locus protein kinase, putative (ARK3)... 27 3.6
At1g22730.1 68414.m02840 MA3 domain-containing protein contains ... 26 4.8
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 26 6.3
At5g19150.2 68418.m02280 carbohydrate kinase family contains Pfa... 26 6.3
At5g19150.1 68418.m02279 carbohydrate kinase family contains Pfa... 26 6.3
At4g24720.1 68417.m03537 hypothetical protein 26 6.3
At5g06560.1 68418.m00740 expressed protein contains Pfam profile... 25 8.4
At1g33670.1 68414.m04165 leucine-rich repeat family protein cont... 25 8.4
>At2g17570.1 68415.m02033 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to dehydrodolichyl diphosphate
synthetase (DEDOL-PP synthase) [GI:796076] and S.
cerevisiae Rer2 [SP|P35196]
Length = 295
Score = 107 bits (256), Expect = 2e-24
Identities = 50/102 (49%), Positives = 69/102 (67%)
Query: 7 ENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWC 66
E F + +VI G +P HIAFIMDGNRRYAKK + +GH GF L L++C
Sbjct: 20 EQIYGFSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYC 79
Query: 67 LDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+LGI VT+YAFSI+NF+R EEV+++M+L EK ++LL++
Sbjct: 80 YELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEK 121
>At5g60510.1 68418.m07588 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 272
Score = 98.3 bits (234), Expect = 1e-21
Identities = 43/100 (43%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Query: 10 VSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDK-STGHHKGFDKLSETLKWCLD 68
+S + F KV++ G +P +I+FIMDGNRR+AKK +++ GH GF + L++C +
Sbjct: 19 MSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKE 78
Query: 69 LGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+G+P VT+YAF ++NFKR EEV +M+L EK + +D+
Sbjct: 79 IGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQ 118
>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein contains
putative undecaprenyl diphosphate synthase domain
[PF01255]; similar to S. cerevisiae dehydrodolichyl
diphosphate synthetase (DEDOL-PP
synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
Length = 271
Score = 93.9 bits (223), Expect = 2e-20
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Query: 10 VSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKK-NSVDKSTGHHKGFDKLSETLKWCLD 68
+S + F +V+ G +P +I+FIMDGNRR+AKK N + GH GF + L++C +
Sbjct: 18 MSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKE 77
Query: 69 LGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+G+P VT++AF ++NFKR EEV +M+L EK + +D+
Sbjct: 78 IGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQ 117
>At2g23410.1 68415.m02795 dehydrodolichyl diphosphate synthase /
DEDOL-PP synthase (DPS) identical to dehydrodolichyl
diphosphate synthase [Arabidopsis thaliana] GI:7960765
Length = 303
Score = 76.6 bits (180), Expect = 3e-15
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 26 VPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFK 85
+P+H+AFI+DGNRR+AK+ + S GH G +L + + C +LG+ V+ +AFS EN+
Sbjct: 70 MPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWG 129
Query: 86 RSKEEVDALMEL 97
R K E+D LM L
Sbjct: 130 RDKIEIDNLMSL 141
>At2g23400.1 68415.m02794 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076; this may be a pseudogene.
Length = 253
Score = 74.1 bits (174), Expect = 2e-14
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 26 VPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFK 85
+P+H++FI+DGNRR+AK++ + + GH G ++ E + C +LGI V+ +AFS EN+
Sbjct: 36 MPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWG 95
Query: 86 RSKEEVDALMEL 97
R K EV LM L
Sbjct: 96 RDKFEVKCLMSL 107
>At5g58784.1 68418.m07364 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 244
Score = 72.5 bits (170), Expect = 6e-14
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 22 KTGR--VPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAF 79
K GR +P+H+A I+DGNRR+A+K + S GH G +L E K C +G ++++AF
Sbjct: 6 KRGRNIMPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAF 65
Query: 80 SIENFKRSKEEVDALMEL 97
S EN++R ++EV LM L
Sbjct: 66 STENWERPEDEVKCLMAL 83
>At5g58780.1 68418.m07362 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 302
Score = 71.3 bits (167), Expect = 1e-13
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 26 VPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFK 85
+P+H+A IMDGNRR+AK+ + S GH G +L E + C LGI V+ +AFS EN+
Sbjct: 70 MPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWG 129
Query: 86 RSKEEVDALMEL 97
R K EV LM L
Sbjct: 130 RHKIEVKCLMSL 141
>At5g58782.1 68418.m07363 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 289
Score = 68.5 bits (160), Expect = 9e-13
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 19 KVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYA 78
K ++ +P+H+A IMDGNRR+AK+ + S G+ G +L E C LGI V+ +A
Sbjct: 50 KELQRELMPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFA 109
Query: 79 FSIENFKRSKEEVDALMEL 97
FS EN+ R K EV LM L
Sbjct: 110 FSTENWGRHKIEVKCLMYL 128
>At5g58770.1 68418.m07361 dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative similar to
GI:796076
Length = 310
Score = 67.3 bits (157), Expect = 2e-12
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 26 VPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFK 85
+P+H+A IMDGN R+AK + GH G + L E ++ C GI +TV+AFS +N+
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 86 RSKEEVDALMEL----AREKFQNL 105
R + E+D L L + +FQNL
Sbjct: 137 RPRIEIDFLFSLFERSLKTEFQNL 160
>At3g53800.1 68416.m05944 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 363
Score = 29.5 bits (63), Expect = 0.51
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 68 DLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
DLG P + ++ S ++F+ + + L+ELARE+ LD
Sbjct: 224 DLGFPRIMIHLASNQDFEVREFALRGLLELAREESVRNLD 263
>At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to CLATHRIN
COAT ASSEMBLY PROTEIN AP180 - Mus musculus,
SWISSPROT:Q61548
Length = 599
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 54 KGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
K F++L + WC ++GI + Y IE K +++++D + E R+K
Sbjct: 281 KQFEELDQFYSWCKNMGIARSSEYP-EIE--KITQKKLDLMDEFIRDK 325
>At5g41940.1 68418.m05106 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 549
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 72 PEVTVYAFSIENFKRSKEEVDALMELAREKFQNL 105
PEV + + + K +KEE D++ +L +++NL
Sbjct: 126 PEVWPFLLGVYDLKSNKEERDSIRQLKLTEYENL 159
>At3g18550.1 68416.m02359 TCP family transcription factor, putative
similar to teosinte branched1 protein GI:13649866
[Danthoniopsis dinteri]
Length = 434
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 55 GFDKLSETLKWCLDLGIPEVTVYAFSIEN 83
GFDK S+T++W L PE+ A ++ +
Sbjct: 184 GFDKASKTVEWLLTQAKPEIIKIATTLSH 212
>At3g48080.1 68416.m05242 lipase class 3 family protein / disease
resistance protein-related similar to disease resistance
protein/lipase homolog EDS1 GI:4454567; contains Pfam
profile PF01764: Lipase
Length = 629
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 41 AKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSI-ENFKRSKEEVDALMELAR 99
A+K V+ D++ E L W +++ P+ + ++FK S EE D + R
Sbjct: 371 AEKQRVENQKKIETKRDQIVERLTWIVEVYKPKCQAHKNGYYDSFKDSNEENDFKANVKR 430
Query: 100 EKFQNLLDEM 109
+ + DE+
Sbjct: 431 VELAGIFDEV 440
>At4g21380.1 68417.m03089 S-locus protein kinase, putative (ARK3)
identical to PIR|T05180|T05180 S-receptor kinase ARK3
precursor - [Arabidopsis thaliana]
Length = 850
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 70 GIPEVTVYAFSIENFKRSKEEV 91
G+PE+ + + + NF SKEEV
Sbjct: 229 GVPEMQPFEYMVFNFTTSKEEV 250
>At1g22730.1 68414.m02840 MA3 domain-containing protein contains
Pfam profile PF02847: MA3 domain; low similarity to
programmed cell death 4 protein [Gallus gallus]
GI:12958564
Length = 693
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 43 KNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDAL 94
K SV + + ++L + LK C D G+ VT+Y + + FKR E ++ L
Sbjct: 599 KKSVVRIIEEKENEERLWKLLKVCFDSGL--VTIYQMT-KGFKRVDESLEDL 647
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 81 IENFKRSKEEVDALMELAREK 101
IENFK+S+EE DA + E+
Sbjct: 572 IENFKKSEEEADASISEEEEE 592
>At5g19150.2 68418.m02280 carbohydrate kinase family contains Pfam
profile PF01256: Carbohydrate kinase
Length = 365
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 13 FQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVD 47
F L C+ +I ++ F++DG+ + NS+D
Sbjct: 175 FLLECVSIIMLLAKKSNVPFVIDGDGLFLVTNSID 209
>At5g19150.1 68418.m02279 carbohydrate kinase family contains Pfam
profile PF01256: Carbohydrate kinase
Length = 365
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 13 FQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVD 47
F L C+ +I ++ F++DG+ + NS+D
Sbjct: 175 FLLECVSIIMLLAKKSNVPFVIDGDGLFLVTNSID 209
>At4g24720.1 68417.m03537 hypothetical protein
Length = 209
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 38 RRYAKKNSVDKSTGHH---KGFDKLSETLKWCLDLGIPEVTVY 77
R+ K D+S H K +DK ++L W + L IP T +
Sbjct: 95 RKTDNKLFKDRSCPHEIVSKAYDKTPQSLDWTIGLDIPTGTYF 137
>At5g06560.1 68418.m00740 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 518
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 34 MDGNRRYAKKNSVDKSTGHHKGFDKLS 60
+ G R Y +KN V +S H + F ++S
Sbjct: 265 VSGGRHYTEKNVVGQSPRHQRHFRRVS 291
>At1g33670.1 68414.m04165 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to receptor kinase-like
protein GB:AAB82755 GI:2586083 from [Oryza
longistaminata] (Science 270 (5243), 1804-1806 (1995))
Length = 455
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 1 MSLWIKE-NCVSFFQLFCIKVIKTGRVPQHIAFIMDGN 37
+S W K+ +C S++ +FC+ I RV +DGN
Sbjct: 49 LSSWQKDIDCCSWYGIFCLPTIHGDRVTM---MALDGN 83
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,824
Number of Sequences: 28952
Number of extensions: 102104
Number of successful extensions: 270
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 250
Number of HSP's gapped (non-prelim): 23
length of query: 109
length of database: 12,070,560
effective HSP length: 71
effective length of query: 38
effective length of database: 10,014,968
effective search space: 380568784
effective search space used: 380568784
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)
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