GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001279-TA|BGIBMGA001279-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
         (109 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   0.40 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   2.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   3.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   4.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   8.6  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 3   LWIKENCVSFFQLF--CIKVIKTGR 25
           +W+  +C SFFQ F  C   IK GR
Sbjct: 409 MWMWLSCSSFFQQFFHCYCPIKFGR 433


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 32  FIMDGNRRYAKKNSVDKSTGH 52
           F+ +   +YA KN VDK   H
Sbjct: 351 FVHEIWNKYALKNEVDKRVRH 371


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 32  FIMDGNRRYAKKNSVDKSTGH 52
           F+ +   +YA KN VDK   H
Sbjct: 307 FVHEIWNKYALKNEVDKRVRH 327


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 40  YAKKNSVDKSTGHHKG 55
           Y  + S D  TGHH G
Sbjct: 207 YDLRGSWDGVTGHHSG 222


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 67  LDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKF 102
           +++ I   T+   S +    +  EVD+L+  A E+F
Sbjct: 294 IEVSIDNHTLSVISTDGSDFNATEVDSLVTYAGERF 329


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 64 KWCLDLGIPEVTVYAFSIE 82
          +W  DLG+P   +Y    E
Sbjct: 48 QWIPDLGVPIGVLYCMKCE 66


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 54  KGFDKLSETLKWCLDLGIPEVTVYAFSI 81
           +  D L     +C D   P +  YAFS+
Sbjct: 102 ESIDDLLSNAVFCRDRVNPYLFYYAFSV 129


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,110
Number of Sequences: 317
Number of extensions: 1017
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 109
length of database: 114,650
effective HSP length: 49
effective length of query: 60
effective length of database: 99,117
effective search space:  5947020
effective search space used:  5947020
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.6 bits)
S2: 38 (19.4 bits)