GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001279-TA|BGIBMGA001279-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
         (109 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   1.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   2.5  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   4.3  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    21   7.5  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    21   7.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   10.0 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           21   10.0 

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 3   LWIKENCVSFFQLF--CIKVIKTGR 25
           +W+  +C SFFQ F  C   +K GR
Sbjct: 396 MWMWLSCSSFFQQFFHCYCPVKFGR 420



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 66  CLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEM 109
           C +LGI  ++  + ++ N +R  E+      L   +FQ ++  M
Sbjct: 118 CKELGIEVISAASHTLYNLERIIEKNGGRAPLTYHQFQAIIASM 161


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 57  DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDEM 109
           ++LSE  KW       E  +Y   ++  ++  EE+D   + + +K   L  E+
Sbjct: 208 EELSEYQKWDKARRTLEYVIYETELKETRKQLEELDGQRKSSGDKQLLLTQEI 260


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 42  KKNSVDKSTGHHKGFDKLSETLKWCLDLGIP-EVTVYAFSIENFKRSKEE 90
           K++ + K  G+H     L+  ++ C  +G+P  V     SI +    K+E
Sbjct: 842 KEHKLTKGCGYHLDLFVLACLIQICTMMGLPWFVAATVLSINHVNSLKKE 891


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/17 (52%), Positives = 14/17 (82%), Gaps = 1/17 (5%)

Query: 57  DKLSETLKWCLD-LGIP 72
           ++L+ET+ +CLD L IP
Sbjct: 151 ERLTETMHFCLDVLDIP 167


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/17 (52%), Positives = 14/17 (82%), Gaps = 1/17 (5%)

Query: 57  DKLSETLKWCLD-LGIP 72
           ++L+ET+ +CLD L IP
Sbjct: 151 ERLTETMHFCLDVLDIP 167


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 5    IKENCVSFFQLFCIKVIKTGRVPQ 28
            ++E  V+  +  C +++KT  VP+
Sbjct: 1984 MREALVNLTRESCYQIVKTNEVPE 2007


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 59  LSETLKWCLDLGIPEVTVYAFSIEN 83
           L  +L W L+  I  +    FS+EN
Sbjct: 644 LHRSLTWILENNITGIIDSTFSVEN 668


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,544
Number of Sequences: 2123
Number of extensions: 3742
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 8
length of query: 109
length of database: 516,269
effective HSP length: 56
effective length of query: 53
effective length of database: 397,381
effective search space: 21061193
effective search space used: 21061193
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 42 (21.0 bits)