Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001279-TA|BGIBMGA001279-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(109 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004117-1|AAH04117.1| 294|Homo sapiens DHDDS protein protein. 158 4e-39
BC003643-1|AAH03643.1| 333|Homo sapiens dehydrodolichyl diphosp... 158 4e-39
AL513365-10|CAI21498.1| 209|Homo sapiens dehydrodolichyl diphos... 158 4e-39
AL513365-9|CAI21497.1| 222|Homo sapiens dehydrodolichyl diphosp... 158 4e-39
AL513365-8|CAI21496.1| 216|Homo sapiens dehydrodolichyl diphosp... 158 4e-39
AL513365-7|CAI21495.1| 334|Homo sapiens dehydrodolichyl diphosp... 158 4e-39
AK023164-1|BAB14439.1| 334|Homo sapiens protein ( Homo sapiens ... 158 4e-39
AB090852-1|BAC57588.1| 333|Homo sapiens dehydrodolichyl diphosp... 158 4e-39
AL513365-6|CAI21494.1| 155|Homo sapiens dehydrodolichyl diphosp... 100 8e-22
AL513365-11|CAI21499.1| 73|Homo sapiens dehydrodolichyl diphos... 83 2e-16
U78723-1|AAF21463.1| 455|Homo sapiens putative G-protein couple... 29 2.2
CR628408-1|CAM28366.1| 455|Homo sapiens G protein-coupled recep... 29 2.2
BX537254-1|CAI18821.1| 455|Homo sapiens G protein-coupled recep... 29 2.2
BX511042-1|CAI13224.2| 455|Homo sapiens G protein-coupled recep... 29 2.2
BT006679-1|AAP35325.1| 455|Homo sapiens putative G-protein coup... 29 2.2
BC067816-1|AAH67816.1| 335|Homo sapiens GPR89A protein protein. 29 2.2
BC003187-1|AAH03187.1| 455|Homo sapiens G protein-coupled recep... 29 2.2
AY358966-1|AAQ89325.1| 455|Homo sapiens SH120 protein. 29 2.2
AY304584-1|AAQ97433.1| 404|Homo sapiens TIRAP3b protein. 29 2.2
AY304581-1|AAQ97430.1| 404|Homo sapiens TIRAP3b long form protein. 29 2.2
AL445591-1|CAH72386.1| 455|Homo sapiens G protein-coupled recep... 29 2.2
AL390725-1|CAI13712.2| 455|Homo sapiens G protein-coupled recep... 29 2.2
AL356004-1|CAI17085.1| 316|Homo sapiens G protein-coupled recep... 29 2.2
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy... 29 2.2
AF132947-1|AAD27722.1| 455|Homo sapiens CGI-13 protein protein. 29 2.2
AB097025-1|BAC77378.1| 455|Homo sapiens putative MAPK activatin... 29 2.2
AB097024-1|BAC77377.1| 455|Homo sapiens putative NFkB activatin... 29 2.2
X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein. 29 3.0
U35636-1|AAB02621.1| 2472|Homo sapiens nebulin protein. 29 3.0
BC109266-1|AAI09267.1| 235|Homo sapiens TICAM2 protein protein. 29 3.0
BC109265-1|AAI09266.1| 235|Homo sapiens TICAM2 protein protein. 29 3.0
AY304583-1|AAQ97432.1| 235|Homo sapiens TIRAP3a protein. 29 3.0
AY304582-1|AAQ97431.1| 235|Homo sapiens TIRAP3a short form prot... 29 3.0
AY275836-1|AAP81748.1| 235|Homo sapiens TIR domain-containing a... 29 3.0
AY232653-1|AAO74498.1| 235|Homo sapiens TRIF-related adapter mo... 29 3.0
AC107052-1|AAY14977.1| 3867|Homo sapiens unknown protein. 29 3.0
AB109098-1|BAC98399.1| 235|Homo sapiens TIR-containing adapter ... 29 3.0
AB097022-1|BAC77375.1| 235|Homo sapiens putative NFkB activatin... 29 3.0
AB091054-1|BAC98397.1| 235|Homo sapiens TICAM-2 protein. 29 3.0
U95032-1|AAC52058.1| 313|Homo sapiens growth-arrest-specific pr... 28 5.2
CR450285-1|CAG29281.1| 313|Homo sapiens GAS2 protein. 28 5.2
BC040470-1|AAH40470.1| 313|Homo sapiens growth arrest-specific ... 28 5.2
BC127094-1|AAI27095.1| 747|Homo sapiens PHTF2 protein protein. 28 6.9
BC127093-1|AAI27094.1| 751|Homo sapiens PHTF2 protein protein. 28 6.9
BC067742-1|AAH67742.1| 352|Homo sapiens PHTF2 protein protein. 28 6.9
BC032334-1|AAH32334.1| 317|Homo sapiens PHTF2 protein protein. 28 6.9
BC022419-1|AAH22419.1| 356|Homo sapiens PHTF2 protein protein. 28 6.9
BC018098-1|AAH18098.1| 345|Homo sapiens PHTF2 protein protein. 28 6.9
AL831969-1|CAD38610.1| 785|Homo sapiens hypothetical protein pr... 28 6.9
>BC004117-1|AAH04117.1| 294|Homo sapiens DHDDS protein protein.
Length = 294
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>BC003643-1|AAH03643.1| 333|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 333
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AL513365-10|CAI21498.1| 209|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 209
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AL513365-9|CAI21497.1| 222|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 222
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AL513365-8|CAI21496.1| 216|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 216
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AL513365-7|CAI21495.1| 334|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 334
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AK023164-1|BAB14439.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ13102 fis, clone NT2RP3002303, weakly similar to
PROBABLE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE (EC
2.5.1.31). ).
Length = 334
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AB090852-1|BAC57588.1| 333|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 333
Score = 158 bits (383), Expect = 4e-39
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+ETL
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETL 62
Query: 64 KWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L++E
Sbjct: 63 RWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEE 107
>AL513365-6|CAI21494.1| 155|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 155
Score = 100 bits (240), Expect = 8e-22
Identities = 44/63 (69%), Positives = 55/63 (87%)
Query: 46 VDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNL 105
V++ GH +GF+KL+ETL+WCL+LGI EVTVYAFSIENFKRSK EVD LM+LAR+KF L
Sbjct: 2 VERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRL 61
Query: 106 LDE 108
++E
Sbjct: 62 MEE 64
>AL513365-11|CAI21499.1| 73|Homo sapiens dehydrodolichyl
diphosphate synthase protein.
Length = 73
Score = 82.6 bits (195), Expect = 2e-16
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 4 WIKENCVSFFQLFCIKVIKTGRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSETL 63
WIKE +S ++ FC +IK G +P+HIAFIMDGNRRYAKK V++ GH +GF+KL+E L
Sbjct: 3 WIKEGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAELL 62
>U78723-1|AAF21463.1| 455|Homo sapiens putative G-protein coupled
receptor protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>CR628408-1|CAM28366.1| 455|Homo sapiens G protein-coupled receptor
89 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>BX537254-1|CAI18821.1| 455|Homo sapiens G protein-coupled receptor
89B protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>BX511042-1|CAI13224.2| 455|Homo sapiens G protein-coupled receptor
89 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>BT006679-1|AAP35325.1| 455|Homo sapiens putative G-protein coupled
receptor protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>BC067816-1|AAH67816.1| 335|Homo sapiens GPR89A protein protein.
Length = 335
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 111 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 147
>BC003187-1|AAH03187.1| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>AY358966-1|AAQ89325.1| 455|Homo sapiens SH120 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>AY304584-1|AAQ97433.1| 404|Homo sapiens TIRAP3b protein.
Length = 404
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 35 DGNRRYAKKNSVDKSTGHHKGFDKLSETLKWC 66
D N R A +SVD S G+H+ K SE L C
Sbjct: 181 DLNTRVAYWHSVDTSPGYHESDSKKSEDLSLC 212
>AY304581-1|AAQ97430.1| 404|Homo sapiens TIRAP3b long form protein.
Length = 404
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 35 DGNRRYAKKNSVDKSTGHHKGFDKLSETLKWC 66
D N R A +SVD S G+H+ K SE L C
Sbjct: 181 DLNTRVAYWHSVDTSPGYHESDSKKSEDLSLC 212
>AL445591-1|CAH72386.1| 455|Homo sapiens G protein-coupled receptor
89B protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>AL390725-1|CAI13712.2| 455|Homo sapiens G protein-coupled receptor
89 protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>AL356004-1|CAI17085.1| 316|Homo sapiens G protein-coupled receptor
89C protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 92 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 128
>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dynein
type 3 protein.
Length = 4116
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 1 MSLWIKENCVSFFQLFCIKVIKTGRVPQHIAFIM 34
M +W+ + C+ F +L C V++T P H+AF M
Sbjct: 1886 MFMWLVQPCLEFGRLHCKFVVQTS--PIHLAFSM 1917
>AF132947-1|AAD27722.1| 455|Homo sapiens CGI-13 protein protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>AB097025-1|BAC77378.1| 455|Homo sapiens putative MAPK activating
protein protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>AB097024-1|BAC77377.1| 455|Homo sapiens putative NFkB activating
protein protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLD 107
I VT A EN ++EVDAL EL+R+ F D
Sbjct: 231 IKSVTTSASGSENLTLIQQEVDALEELSRQLFLETAD 267
>X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.
Length = 6669
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEV---TVYAFSIENFK-RSKEEVDALM 95
Y K K GHH GF L + K L + + ++ Y E +K + VD L
Sbjct: 2306 YKYKQGYRKQLGHHVGFRSLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFSSPVDMLG 2365
Query: 96 ELAREKFQNLLDEM 109
+ +K Q L+ ++
Sbjct: 2366 VVLAKKCQELVSDV 2379
>U35636-1|AAB02621.1| 2472|Homo sapiens nebulin protein.
Length = 2472
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEV---TVYAFSIENFK-RSKEEVDALM 95
Y K K GHH GF L + K L + + ++ Y E +K + VD L
Sbjct: 2027 YKYKQGYRKQLGHHVGFRSLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFSSPVDMLG 2086
Query: 96 ELAREKFQNLLDEM 109
+ +K Q L+ ++
Sbjct: 2087 VVLAKKCQELVSDV 2100
>BC109266-1|AAI09267.1| 235|Homo sapiens TICAM2 protein protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>BC109265-1|AAI09266.1| 235|Homo sapiens TICAM2 protein protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AY304583-1|AAQ97432.1| 235|Homo sapiens TIRAP3a protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AY304582-1|AAQ97431.1| 235|Homo sapiens TIRAP3a short form
protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AY275836-1|AAP81748.1| 235|Homo sapiens TIR domain-containing
adapter protein protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AY232653-1|AAO74498.1| 235|Homo sapiens TRIF-related adapter
molecule protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AC107052-1|AAY14977.1| 3867|Homo sapiens unknown protein.
Length = 3867
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEV---TVYAFSIENFK-RSKEEVDALM 95
Y K K GHH GF L + K L + + ++ Y E +K + VD L
Sbjct: 2306 YKYKQGYRKQLGHHVGFRSLQDDPKLVLSMNVAKMQSEREYKKDFEKWKTKFSSPVDMLG 2365
Query: 96 ELAREKFQNLLDEM 109
+ +K Q L+ ++
Sbjct: 2366 VVLAKKCQELVSDV 2379
>AB109098-1|BAC98399.1| 235|Homo sapiens TIR-containing adapter
molecule-2 protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AB097022-1|BAC77375.1| 235|Homo sapiens putative NFkB activating
protein protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>AB091054-1|BAC98397.1| 235|Homo sapiens TICAM-2 protein.
Length = 235
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 40 YAKKNSVDKSTGHHKGFDKLSETLKWC 66
+ K++SVD S G+H+ K SE L C
Sbjct: 17 WGKRHSVDTSPGYHESDSKKSEDLSLC 43
>U95032-1|AAC52058.1| 313|Homo sapiens growth-arrest-specific
protein 2 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 57 DKLSETLKWCLDLGIPEVTVY-AFSIENFKRSKEEVDALMELAR 99
D + L WC DLG+ E ++ + + K+ +E L+EL R
Sbjct: 111 DNTANFLSWCRDLGVDETCLFESEGLVLHKQPREVCLCLLELGR 154
>CR450285-1|CAG29281.1| 313|Homo sapiens GAS2 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 57 DKLSETLKWCLDLGIPEVTVY-AFSIENFKRSKEEVDALMELAR 99
D + L WC DLG+ E ++ + + K+ +E L+EL R
Sbjct: 111 DNTANFLSWCRDLGVDETCLFESEGLVLHKQPREVCLCLLELGR 154
>BC040470-1|AAH40470.1| 313|Homo sapiens growth arrest-specific 2
protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 57 DKLSETLKWCLDLGIPEVTVY-AFSIENFKRSKEEVDALMELAR 99
D + L WC DLG+ E ++ + + K+ +E L+EL R
Sbjct: 111 DNTANFLSWCRDLGVDETCLFESEGLVLHKQPREVCLCLLELGR 154
>BC127094-1|AAI27095.1| 747|Homo sapiens PHTF2 protein protein.
Length = 747
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 214 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 242
>BC127093-1|AAI27094.1| 751|Homo sapiens PHTF2 protein protein.
Length = 751
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 218 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 246
>BC067742-1|AAH67742.1| 352|Homo sapiens PHTF2 protein protein.
Length = 352
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 214 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 242
>BC032334-1|AAH32334.1| 317|Homo sapiens PHTF2 protein protein.
Length = 317
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 77 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 105
>BC022419-1|AAH22419.1| 356|Homo sapiens PHTF2 protein protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 218 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 246
>BC018098-1|AAH18098.1| 345|Homo sapiens PHTF2 protein protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 56 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 84
>AL831969-1|CAD38610.1| 785|Homo sapiens hypothetical protein
protein.
Length = 785
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 29 HIAFIMDGNRRYAKKNSVDKSTGHHKGFDKL 59
H AF + G+++ KNS+DKST G+ L
Sbjct: 252 HAAFFLSGSKK--AKNSIDKSTETDNGYVSL 280
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,130,899
Number of Sequences: 224733
Number of extensions: 563132
Number of successful extensions: 1194
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 54
length of query: 109
length of database: 73,234,838
effective HSP length: 79
effective length of query: 30
effective length of database: 55,480,931
effective search space: 1664427930
effective search space used: 1664427930
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)
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