GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001279-TA|BGIBMGA001279-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
         (109 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069247-1|AAL39392.1|  300|Drosophila melanogaster GM02310p pro...   128   1e-30
AE014298-1088|AAF46296.2|  300|Drosophila melanogaster CG10778-P...   128   1e-30
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    32   0.18 
DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germlin...    28   2.2  
AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-P...    28   2.2  
AY058407-1|AAL13636.1|  397|Drosophila melanogaster GH18144p pro...    27   3.9  
AE014297-448|AAN13374.1|  397|Drosophila melanogaster CG31367-PA...    27   3.9  
AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA...    27   5.1  

>AY069247-1|AAL39392.1|  300|Drosophila melanogaster GM02310p
           protein.
          Length = 300

 Score =  128 bits (310), Expect = 1e-30
 Identities = 53/106 (50%), Positives = 78/106 (73%), Gaps = 1/106 (0%)

Query: 4   WIKENCVSFFQLFCIKVIKT-GRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSET 62
           W+ +   ++ +   ++ ++  G +P H+AF+MDGNRR+A+   +DK  GH +GF+KL++ 
Sbjct: 3   WVSDYKYTWTERIAMRTLRACGYIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADC 62

Query: 63  LKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
           L+WCLD+G+ EVT +AFSIENFKRS EEV+ L  LAREKF  LL+E
Sbjct: 63  LRWCLDVGVREVTTFAFSIENFKRSNEEVEGLFNLAREKFARLLEE 108


>AE014298-1088|AAF46296.2|  300|Drosophila melanogaster CG10778-PA
           protein.
          Length = 300

 Score =  128 bits (310), Expect = 1e-30
 Identities = 53/106 (50%), Positives = 78/106 (73%), Gaps = 1/106 (0%)

Query: 4   WIKENCVSFFQLFCIKVIKT-GRVPQHIAFIMDGNRRYAKKNSVDKSTGHHKGFDKLSET 62
           W+ +   ++ +   ++ ++  G +P H+AF+MDGNRR+A+   +DK  GH +GF+KL++ 
Sbjct: 3   WVSDYKYTWTERIAMRTLRACGYIPHHVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADC 62

Query: 63  LKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
           L+WCLD+G+ EVT +AFSIENFKRS EEV+ L  LAREKF  LL+E
Sbjct: 63  LRWCLDVGVREVTTFAFSIENFKRSNEEVEGLFNLAREKFARLLEE 108


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
            protein.
          Length = 1489

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 33   IMDGNRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIEN-FKRSKEEV 91
            I+D      +KN   K T H+   D   E LK  L+  + EV + +    N FK   E +
Sbjct: 1067 IVDHQMEKLEKNCEQKETAHNNDLDLTDEDLKEFLEPMVEEVELMSQKKANDFKDFLEPM 1126

Query: 92   DALMELAREKFQNLL 106
               +EL  ++ +N+L
Sbjct: 1127 PEELELMSQQKKNIL 1141


>DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germline
           specific protein protein.
          Length = 470

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  ETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNL 105
           + LK+C DLG  E+ +Y    E+++  ++     MEL R    N+
Sbjct: 194 DCLKFCKDLGQIELLIYEIR-EDYRNDRDLCQGSMELLRSAQYNI 237


>AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-PA
           protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  ETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNL 105
           + LK+C DLG  E+ +Y    E+++  ++     MEL R    N+
Sbjct: 194 DCLKFCKDLGQIELLIYEIR-EDYRNDRDLCQGSMELLRSAQYNI 237


>AY058407-1|AAL13636.1|  397|Drosophila melanogaster GH18144p
           protein.
          Length = 397

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 85  KRSKEEVDALMELAREKFQNLLDEM 109
           ++  E +D LM+  RE+F+ +LDE+
Sbjct: 246 RKFNEHIDNLMKKKRERFREMLDEI 270


>AE014297-448|AAN13374.1|  397|Drosophila melanogaster CG31367-PA
           protein.
          Length = 397

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)

Query: 85  KRSKEEVDALMELAREKFQNLLDEM 109
           ++  E +D LM+  RE+F+ +LDE+
Sbjct: 246 RKFNEHIDNLMKKKRERFREMLDEI 270


>AE014296-602|AAF47740.1| 2272|Drosophila melanogaster CG14967-PA
            protein.
          Length = 2272

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)

Query: 69   LGIPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLL 106
            +GI ++ + AF      +S + V+ L+EL   + +NLL
Sbjct: 1966 IGIADLVLSAFLYTKKSKSDDSVEHLLELGNIRMENLL 2003


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.137    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,155,360
Number of Sequences: 52641
Number of extensions: 193110
Number of successful extensions: 502
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 497
Number of HSP's gapped (non-prelim): 8
length of query: 109
length of database: 24,830,863
effective HSP length: 75
effective length of query: 34
effective length of database: 20,882,788
effective search space: 710014792
effective search space used: 710014792
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 55 (26.2 bits)