Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001279-TA|BGIBMGA001279-PA|IPR001441|Di-trans-poly-cis-
decaprenylcistransferase
(109 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical pr... 114 1e-26
U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase... 32 0.075
U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase... 32 0.075
U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protei... 27 2.1
U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protei... 27 2.1
U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protei... 27 2.1
U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protei... 27 2.1
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 27 3.7
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 27 3.7
Z48544-7|CAA88440.1| 249|Caenorhabditis elegans Hypothetical pr... 27 3.7
AL032623-15|CAA21518.1| 593|Caenorhabditis elegans Hypothetical... 27 3.7
Z99288-8|CAB16550.1| 231|Caenorhabditis elegans Hypothetical pr... 26 4.9
AL132876-21|CAD21670.2| 944|Caenorhabditis elegans Hypothetical... 26 4.9
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 26 6.5
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 26 6.5
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 26 6.5
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 26 6.5
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 25 8.6
U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical pr... 25 8.6
U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine decar... 25 8.6
>Z92811-2|CAI46583.1| 299|Caenorhabditis elegans Hypothetical
protein T01G1.4 protein.
Length = 299
Score = 114 bits (275), Expect = 1e-26
Identities = 54/98 (55%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
Query: 12 FFQLFCIKVIKTGRVPQHIAFIMDGNRRYAK-KNSVDKSTGHHKGFDKLSETLKWCLDLG 70
++Q + I +G +P+H+AF+MDGNRR+AK K+ + GH KGF +L++ L WC G
Sbjct: 22 WWQWLLRRFIASGPIPRHVAFVMDGNRRFAKTKHLGNVIKGHEKGFTQLAKILDWCNRFG 81
Query: 71 IPEVTVYAFSIENFKRSKEEVDALMELAREKFQNLLDE 108
I E+TVYAFSIENFKRS+EEV LM LA EKFQ LL++
Sbjct: 82 IREITVYAFSIENFKRSEEEVSGLMRLAEEKFQKLLND 119
>U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase a
protein 2, isoformb protein.
Length = 408
Score = 32.3 bits (70), Expect = 0.075
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 52 HHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
+++ FD + ++W +D I E Y ENF + + ++ + RE+
Sbjct: 287 NYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQ 336
>U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase a
protein 2, isoforma protein.
Length = 429
Score = 32.3 bits (70), Expect = 0.075
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 52 HHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
+++ FD + ++W +D I E Y ENF + + ++ + RE+
Sbjct: 308 NYRAFDFANHFIEWTIDYDIDEAPFYKIQTENFPENDQMLEFFLNYLREQ 357
>U80437-5|AAV58881.1| 527|Caenorhabditis elegans Neurabin protein
1, isoform e protein.
Length = 527
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 78 AFSIENFKRSKEEVDALMELAREKFQNLLDEM 109
AFS+E++ R E++D + A + + L+ M
Sbjct: 33 AFSVEDYDRKNEDIDPVASCAEYELERRLERM 64
>U80437-3|AAK68243.1| 561|Caenorhabditis elegans Neurabin protein
1, isoform b protein.
Length = 561
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 78 AFSIENFKRSKEEVDALMELAREKFQNLLDEM 109
AFS+E++ R E++D + A + + L+ M
Sbjct: 67 AFSVEDYDRKNEDIDPVASCAEYELERRLERM 98
>U80437-2|AAL16317.1| 658|Caenorhabditis elegans Neurabin protein
1, isoform d protein.
Length = 658
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 78 AFSIENFKRSKEEVDALMELAREKFQNLLDEM 109
AFS+E++ R E++D + A + + L+ M
Sbjct: 164 AFSVEDYDRKNEDIDPVASCAEYELERRLERM 195
>U80437-1|AAB37620.1| 721|Caenorhabditis elegans Neurabin protein
1, isoform a protein.
Length = 721
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 78 AFSIENFKRSKEEVDALMELAREKFQNLLDEM 109
AFS+E++ R E++D + A + + L+ M
Sbjct: 227 AFSVEDYDRKNEDIDPVASCAEYELERRLERM 258
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 25 RVPQHIAFIMDG-NRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDL 69
R+ + ++ I G Y KNS + G G+ L + L W +D+
Sbjct: 125 RIEEEVSQIFKGLGYPYPLKNSYYQPMGSSHGYPHLLDALSWLIDI 170
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 25 RVPQHIAFIMDG-NRRYAKKNSVDKSTGHHKGFDKLSETLKWCLDL 69
R+ + ++ I G Y KNS + G G+ L + L W +D+
Sbjct: 125 RIEEEVSQIFKGLGYPYPLKNSYYQPMGSSHGYPHLLDALSWLIDI 170
>Z48544-7|CAA88440.1| 249|Caenorhabditis elegans Hypothetical
protein ZK945.7 protein.
Length = 249
Score = 26.6 bits (56), Expect = 3.7
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 53 HKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSK--EEVDALMELAREKFQ 103
H FD + + +LGIP+ V NF +K + ++ L +L +KFQ
Sbjct: 163 HPTFDTTAYVERLQAELGIPDSKVIGLECSNFSNAKIIDSIECLHQL--DKFQ 213
>AL032623-15|CAA21518.1| 593|Caenorhabditis elegans Hypothetical
protein Y43F8B.14 protein.
Length = 593
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/52 (23%), Positives = 23/52 (44%)
Query: 47 DKSTGHHKGFDKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELA 98
DK+ + +L T +WCL ++ + F +KR + + +E A
Sbjct: 153 DKNDEQFQELCQLKATFRWCLTENHKQLRLAEFFDRRYKRETSDAEKFLEQA 204
>Z99288-8|CAB16550.1| 231|Caenorhabditis elegans Hypothetical
protein ZK262.9 protein.
Length = 231
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 51 GHHKGFDKLSETLKWCL 67
GHHKG L+ T K+CL
Sbjct: 93 GHHKGCTGLNVTCKYCL 109
>AL132876-21|CAD21670.2| 944|Caenorhabditis elegans Hypothetical
protein Y105E8A.23 protein.
Length = 944
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 54 KGFDKLSETLKWCLDLGIPEVTVYAFSIE 82
KG L +T++W LG+P V Y +E
Sbjct: 783 KGSSDLMKTVEWITPLGLPVVQPYCKLVE 811
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 57 DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
DK S WC LG+ ++A + F S + E+ ++K
Sbjct: 502 DKKSSKFSWCQILGLLLALLFAIFLLGFLTSDNTAIRVKEITKDK 546
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 57 DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
DK S WC LG+ ++A + F S + E+ ++K
Sbjct: 502 DKKSSKFSWCQILGLLLALLFAIFLLGFLTSDNTAIRVKEITKDK 546
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 57 DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
DK S WC LG+ ++A + F S + E+ ++K
Sbjct: 502 DKKSSKFSWCQILGLLLALLFAIFLLGFLTSDNTAIRVKEITKDK 546
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 57 DKLSETLKWCLDLGIPEVTVYAFSIENFKRSKEEVDALMELAREK 101
DK S WC LG+ ++A + F S + E+ ++K
Sbjct: 502 DKKSSKFSWCQILGLLLALLFAIFLLGFLTSDNTAIRVKEITKDK 546
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 80 SIENFKRSKEEVDALMELAREKFQNLLDE 108
+ E +R EE+DAL E AR N +E
Sbjct: 325 AFERDRRPNEEIDALWERARSNVINSAEE 353
>U64854-5|AAB18317.1| 422|Caenorhabditis elegans Hypothetical
protein K11C4.4 protein.
Length = 422
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 52 HHKGFDKLSETLKWCLDLGIPE 73
HH F+K++ET++ LD P+
Sbjct: 246 HHNPFEKIAETIRDALDEFFPD 267
>U03059-1|AAA88795.1| 422|Caenorhabditis elegans ornithine
decarboxylase protein.
Length = 422
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 52 HHKGFDKLSETLKWCLDLGIPE 73
HH F+K++ET++ LD P+
Sbjct: 246 HHNPFEKIAETIRDALDEFFPD 267
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,768,813
Number of Sequences: 27539
Number of extensions: 106863
Number of successful extensions: 439
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 420
Number of HSP's gapped (non-prelim): 21
length of query: 109
length of database: 12,573,161
effective HSP length: 72
effective length of query: 37
effective length of database: 10,590,353
effective search space: 391843061
effective search space used: 391843061
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)
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