Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001278-TA|BGIBMGA001278-PA|IPR001365|Adenosine/AMP
deaminase
(303 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15559| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_24411| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-05
SB_29144| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_12771| Best HMM Match : SET (HMM E-Value=9.1e-18) 30 2.0
SB_37135| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 30 2.7
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 29 3.6
SB_34159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 4.7
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 29 4.7
SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18) 29 6.2
>SB_15559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 166 EEVLEMLNFKPERIGHGVCIHPKYGGTEETWIALCQSKIPVEVCLTSNVNTKITPDYESH 225
+E ++L +RIGHG C+HP GG++E + + IP+E+CL+SNV Y+ H
Sbjct: 91 KEAKDLLELPTDRIGHGTCLHPDRGGSQELLDIVEKHAIPLELCLSSNVQCHTVSSYDDH 150
Query: 226 HFKELIEAGLSVVLC 240
H V+C
Sbjct: 151 HMWHWYNTNHPFVIC 165
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 60.5 bits (140), Expect = 2e-09
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 30 DTRNLSECFQVFSIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPRDTQY--ITK 87
D N SE F+VFS+ H L ++ + T + +F + Y+ELRSTP+ +TK
Sbjct: 30 DGENFSEGFKVFSVIHKLVDDVNSVKIVTGDVIHDFAGENVKYLELRSTPKSNPKTGMTK 89
Query: 88 KQYIDSIIRAMEASQLQ-------------------EVEEIADIAIERHKIHPDTVVGIE 128
+ Y+D+I+ A+E ++ + E E A +A++ K + D V G++
Sbjct: 90 QAYVDAILTAIEEAKQKSPGIVVRYLVSIDRKKGPAEAVENAQLAVDYRKRYGDVVCGVD 149
Query: 129 LSGNPAV 135
L G+PAV
Sbjct: 150 LGGDPAV 156
>SB_24411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 44.8 bits (101), Expect = 9e-05
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 241 TDDKGVFATSLSQEYRLCAESFALTRIQVAKLSLDAAQCIFSEANIRE 288
TDDKGVF TSLS+EY + A + LT+ QV S A +F++ +++
Sbjct: 1 TDDKGVFRTSLSKEYAIMASTLKLTKCQVWDNSYKAIDHVFADDQLKD 48
>SB_29144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 206 VEVCLTSNVNT-KITPDYESHHFKELIEAGLSVVLCTDDKGVFATSLSQEYRLCAESFAL 264
+E C TS++ T + P ++ H + G + L +DD V T++ EYR+ + L
Sbjct: 184 LETCPTSSILTGAVPPPFKCHPILKFARDGANFSLNSDDPLVCDTTIENEYRVAHDEIGL 243
Query: 265 TRIQVAKLSLDAAQCIF 281
K +L+AA+ F
Sbjct: 244 GEEDFKKATLNAAKASF 260
>SB_12771| Best HMM Match : SET (HMM E-Value=9.1e-18)
Length = 273
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 89 QYIDSIIRAMEASQLQEVEEIADIAIERHKIHPDTVVGIELSGNPA 134
+YI SIIR A++ + + E + I +I D+V+ ++G PA
Sbjct: 190 EYIGSIIRNEVANKKESIYESQNRGIYMFRIDSDSVIDATIAGGPA 235
>SB_37135| Best HMM Match : Guanylate_cyc (HMM E-Value=0)
Length = 584
Score = 29.9 bits (64), Expect = 2.7
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 39 QVFSIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPRDTQYITKKQYIDSIIRAM 98
QV ++ + + +T + L + + + + + G Y+ + P T+Y + D + +
Sbjct: 434 QVVTMLNCMYTTFDKL--SEKHNVYKVETIGDAYMVVSGIPERTKYHAE-HVADMALNML 490
Query: 99 EAS-QLQEVEEIADIAIERHKIHPDTVV-GIELSGNPAVGNFGDFIPALNRARQSGLKVT 156
A ++++ + D R IH TVV G+ P FGD + +R +GL +
Sbjct: 491 SAMPEIEDPAGLNDHLRIRIGIHTGTVVAGVVGLKMPRYCLFGDTVNTASRMESTGLAMA 550
Query: 157 LHCGE 161
+H E
Sbjct: 551 IHVSE 555
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 88 KQYIDSIIRAMEASQLQEVEEIADIAIERHKIHPDTV 124
K ++ IIR MEA +L +E D+ E+H I + +
Sbjct: 669 KLELNKIIRQMEAEKLAITQEKRDVEAEKHSIRQELI 705
>SB_34159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 98 MEASQLQEVEEIADIAIERHKIHPDTVVGIELSGNPAVGNFGDFIPALNRARQS 151
+ A +LQ E+ IA+E + IH D + G P + NF D + ++N + S
Sbjct: 694 VSAVRLQPCNEMQCIALEVNGIHYDVAIRTSSKGTPGI-NFSDHV-SINSSADS 745
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 218 ITPDYESHHFKELIEAGLSVVLCTDDKGVFATSLSQEYRLCAESFALTRIQVAKLSLD 275
I PD E+ E GL V+ DD AT L+ L S T K+S+D
Sbjct: 1265 IGPDVNEAELLEIAEGGLDHVIRVDDYEALATKLNSILALSCPSGQETCTTGRKISID 1322
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 28 AGDTRNLSECFQVFSIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPRDTQY 84
AGD+ SE V S + L SE + ++Q+D C++E + ++ +Y
Sbjct: 368 AGDSIQTSEEIDVPSDQNDLHEISEGIPDVARDITTDYQQDQSCHVEQEQSDQEVKY 424
>SB_7933| Best HMM Match : GCC2_GCC3 (HMM E-Value=1.4e-18)
Length = 1023
Score = 28.7 bits (61), Expect = 6.2
Identities = 9/10 (90%), Positives = 10/10 (100%)
Query: 182 GVCIHPKYGG 191
GVC+HPKYGG
Sbjct: 158 GVCVHPKYGG 167
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,703,947
Number of Sequences: 59808
Number of extensions: 377030
Number of successful extensions: 779
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 768
Number of HSP's gapped (non-prelim): 12
length of query: 303
length of database: 16,821,457
effective HSP length: 82
effective length of query: 221
effective length of database: 11,917,201
effective search space: 2633701421
effective search space used: 2633701421
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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