GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001278-TA|BGIBMGA001278-PA|IPR001365|Adenosine/AMP
deaminase
         (303 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    29   0.21 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   3.5  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    24   4.6  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         24   4.6  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   4.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   6.1  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.1  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 0.21
 Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 61  TLQEFQEDGCCYIELRSTPRDT-QYITKKQYIDSIIRAMEASQLQEVEEIADIAIERHKI 119
           T++  + D C  +EL S PR+   ++  +    +II + E   +Q+V  +    I   +I
Sbjct: 21  TMRVERADVCLMVELHSVPRNNGNWVADRDGKVAIIASSETYPVQQVVSVTQSGIAAARI 80

Query: 120 HPDTVVGIELSGNPAVGNFGDFIPALN 146
           +    +   +S +  V  F + +  ++
Sbjct: 81  NDVLFICCYVSPSAGVSEFEEVMQRID 107


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 158 HCGEVCNPEEVLEMLNFKPERIGHGVCIHP 187
           H  + CN E    + +  P R+GH  C+ P
Sbjct: 395 HLAKDCNAEVKCAVCS-GPHRVGHSDCVRP 423


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 255 YRLCAESFALTRIQVAKLSLDAAQCIFSEANIRELIIGKILKFMNDYT 302
           YR   E++  T+I    + L  A C   E ++  L+   I  +  ++T
Sbjct: 341 YRRQVEAYGATKIAQTTVDLVQATCRLGECSLGCLVADAIADYYTNHT 388


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 255 YRLCAESFALTRIQVAKLSLDAAQCIFSEANIRELIIGKILKFMNDYT 302
           YR   E++  T+I    + L  A C   E ++  L+   I  +  ++T
Sbjct: 341 YRRQVEAYGATKIAQTTVDLVQATCRLGECSLGCLVADAIADYYTNHT 388


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 104 QEVEEIADIAIERHKIHPDTVVGIELSGNP 133
           QE+    D++I+  +I P   + + +SG P
Sbjct: 512 QELRNNFDLSIDEQEIKPGRQIELSMSGRP 541


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 59  ELTLQEFQEDGCCYIELRSTPRDTQYITKKQYIDSIIRAMEASQLQEVE 107
           E  LQE   DG   +E R    +T+    K+  D  + +M AS  +EV+
Sbjct: 423 EQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDE-LASMIASAQREVD 470


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 83  QYITKKQYIDSIIRAMEASQLQEVEEIAD 111
           QY T K  +D  IRA + +  QE+ + A+
Sbjct: 385 QYRTAKAELDRAIRASKKAAFQELIDAAE 413


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,711
Number of Sequences: 2123
Number of extensions: 11792
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 7
length of query: 303
length of database: 516,269
effective HSP length: 64
effective length of query: 239
effective length of database: 380,397
effective search space: 90914883
effective search space used: 90914883
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)