Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001278-TA|BGIBMGA001278-PA|IPR001365|Adenosine/AMP
deaminase
(303 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical p... 138 3e-33
U61947-4|AAO44914.1| 349|Caenorhabditis elegans Hypothetical pr... 54 2e-07
U61947-3|AAB03130.2| 391|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z68161-10|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 31 1.3
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 31 1.3
U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical pr... 30 1.8
U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical pr... 30 1.8
U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 28 7.2
>U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical
protein C44B7.12 protein.
Length = 388
Score = 138 bits (335), Expect = 3e-33
Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 25/278 (8%)
Query: 33 NLSECFQVFSIAHSLTSTSEALVMATELTLQEFQEDGCCYIELRSTPRDTQYITKKQYID 92
N++ F F + H++ EA+ +A T++EF+ED C Y+ELR++P++T ++T + Y+
Sbjct: 102 NMTGVFDCFPVIHAILRKPEAIRIAIRQTIKEFEEDNCVYLELRTSPKETDFMTYEDYLQ 161
Query: 93 SIIRAMEAS--QLQEVEEIADIAIERH----------------KIHPDTVVGIELSGNPA 134
I + EA+ + ++ ++++R + + +VG+ELSG+P
Sbjct: 162 VCIESFEAAKHEFPRIKTFLIVSLDRRMPFETAAHILGLIGEAQQRTNVIVGVELSGDPH 221
Query: 135 VGNFGDFIPALNRARQSGLKVTLHCGEVC-NPEEVLEMLNFKPERIGHGVCIHPKYGGTE 193
+ + R GL +T+H EV N +V + LN +P+RIGHG +H
Sbjct: 222 LDGRRLLKLFVAARRFHGLGITIHLAEVLQNMADVEDYLNLRPDRIGHGTFLHTD----P 277
Query: 194 ETWIALCQSKIPVEVCLTSNVNTKITPDYESHHFKELIEAGLSVVLCTDDKGVF-ATSLS 252
T + KIP+E+CL+SNV +K T +Y + HF + G+ V +CTDDKGV +L+
Sbjct: 278 YTEYLTNKYKIPLEICLSSNVYSKTTTNYRNSHFNYWRKRGVPVFICTDDKGVIPGATLT 337
Query: 253 QEYRLCAESFALTRIQVAKLSLDAAQCIFS-EANIREL 289
+EY A +F L+ ++ ++ DA F+ + N+ +L
Sbjct: 338 EEYYKAAITFDLSTEELIGINQDALLNSFAYKYNVTDL 375
>U61947-4|AAO44914.1| 349|Caenorhabditis elegans Hypothetical
protein C06G3.5b protein.
Length = 349
Score = 53.6 bits (123), Expect = 2e-07
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 140 DFIPALNRARQSGLKVTLHCGEVCNPEEVLEML-NFKPERIGHGVCIHPKYGGTEETWIA 198
+ + A A + G+ T+H GE P+EV++ + + ERIGHG + EE ++
Sbjct: 187 EVVAAFQEAHKRGIHRTVHAGESGGPKEVIKAIEDMYAERIGHGY----RVMRDEEMYLE 242
Query: 199 -LCQSK-IPVEVCLTSNVNTKITP-DYESHHFKELIEAGLSVVLCTDDKGVFATSLSQEY 255
SK + +E C S+V T P D+++H + ++ + DD F S+ E
Sbjct: 243 HFVNSKNVHLEACPYSSVMTGAVPLDWKNHPIARWAKDDVNFSVSRDDPTCFDNSMLSEL 302
Query: 256 RLCAESFALTRIQVAKLSLDAAQ-CIFSEANIRELI 290
L + L Q+ K L+AA+ C E EL+
Sbjct: 303 TLVHKQIGLDVHQLWKAQLNAARSCFLPEDEKAELV 338
>U61947-3|AAB03130.2| 391|Caenorhabditis elegans Hypothetical
protein C06G3.5a protein.
Length = 391
Score = 53.6 bits (123), Expect = 2e-07
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 140 DFIPALNRARQSGLKVTLHCGEVCNPEEVLEML-NFKPERIGHGVCIHPKYGGTEETWIA 198
+ + A A + G+ T+H GE P+EV++ + + ERIGHG + EE ++
Sbjct: 229 EVVAAFQEAHKRGIHRTVHAGESGGPKEVIKAIEDMYAERIGHGY----RVMRDEEMYLE 284
Query: 199 -LCQSK-IPVEVCLTSNVNTKITP-DYESHHFKELIEAGLSVVLCTDDKGVFATSLSQEY 255
SK + +E C S+V T P D+++H + ++ + DD F S+ E
Sbjct: 285 HFVNSKNVHLEACPYSSVMTGAVPLDWKNHPIARWAKDDVNFSVSRDDPTCFDNSMLSEL 344
Query: 256 RLCAESFALTRIQVAKLSLDAAQ-CIFSEANIRELI 290
L + L Q+ K L+AA+ C E EL+
Sbjct: 345 TLVHKQIGLDVHQLWKAQLNAARSCFLPEDEKAELV 380
>Z68161-10|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 51 SEALVMATELTLQEFQEDGCCYIELRSTPRDTQYITKKQYIDSIIRAMEASQ--LQEVEE 108
SEA ++ E Q+ E G C ELR+T ++ + + KKQ + I R E S+ +Q+ EE
Sbjct: 53 SEARIIQLE---QQLLEPGECGSELRATIKNQEELLKKQ-SEEIERCKEESRMLIQQKEE 108
Query: 109 IADIAIE 115
+ +I E
Sbjct: 109 MENIHSE 115
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 51 SEALVMATELTLQEFQEDGCCYIELRSTPRDTQYITKKQYIDSIIRAMEASQ--LQEVEE 108
SEA ++ E Q+ E G C ELR+T ++ + + KKQ + I R E S+ +Q+ EE
Sbjct: 53 SEARIIQLE---QQLLEPGECGSELRATIKNQEELLKKQ-SEEIERCKEESRMLIQQKEE 108
Query: 109 IADIAIE 115
+ +I E
Sbjct: 109 MENIHSE 115
>U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical
protein C34F11.3a protein.
Length = 740
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 158 HCGEVCNPEEVLEMLNFKPERIGHGVCIHPKYGGTEETWIALCQSKIPVEVCLTSNVNTK 217
HCGE + +L E I HG+ + K + + L Q + + ++ N
Sbjct: 564 HCGEAGHVSHLLTGY-LTSESIAHGILLR-KVPVLQYLYY-LTQ----IGIAMSPLSNNS 616
Query: 218 ITPDYESHHFKELIEAGLSVVLCTDDKGVF---ATSLSQEYRLCAESFALTRIQVAKLS 273
+ Y+ + E ++ GL+V L TDD F +L +E+ + A+ + L+ + +L+
Sbjct: 617 LFISYQRNPLPEYLQKGLNVSLSTDDPLQFHYTKEALMEEFSIAAQVWKLSSCDMCELA 675
>U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical
protein C34F11.3c protein.
Length = 803
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 158 HCGEVCNPEEVLEMLNFKPERIGHGVCIHPKYGGTEETWIALCQSKIPVEVCLTSNVNTK 217
HCGE + +L E I HG+ + K + + L Q + + ++ N
Sbjct: 627 HCGEAGHVSHLLTGY-LTSESIAHGILLR-KVPVLQYLYY-LTQ----IGIAMSPLSNNS 679
Query: 218 ITPDYESHHFKELIEAGLSVVLCTDDKGVF---ATSLSQEYRLCAESFALTRIQVAKLS 273
+ Y+ + E ++ GL+V L TDD F +L +E+ + A+ + L+ + +L+
Sbjct: 680 LFISYQRNPLPEYLQKGLNVSLSTDDPLQFHYTKEALMEEFSIAAQVWKLSSCDMCELA 738
>U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical
protein C34F11.3b protein.
Length = 764
Score = 30.3 bits (65), Expect = 1.8
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 158 HCGEVCNPEEVLEMLNFKPERIGHGVCIHPKYGGTEETWIALCQSKIPVEVCLTSNVNTK 217
HCGE + +L E I HG+ + K + + L Q + + ++ N
Sbjct: 588 HCGEAGHVSHLLTGY-LTSESIAHGILLR-KVPVLQYLYY-LTQ----IGIAMSPLSNNS 640
Query: 218 ITPDYESHHFKELIEAGLSVVLCTDDKGVF---ATSLSQEYRLCAESFALTRIQVAKLS 273
+ Y+ + E ++ GL+V L TDD F +L +E+ + A+ + L+ + +L+
Sbjct: 641 LFISYQRNPLPEYLQKGLNVSLSTDDPLQFHYTKEALMEEFSIAAQVWKLSSCDMCELA 699
>Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical
protein M05D6.7 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 166 EEVLEMLNFKPERIGHGVCIHPKYGGTEETWIALCQSKIPV------EVCLTSNVNTKIT 219
+ L + +F + +GV I GT E LCQS +PV + + SN T
Sbjct: 144 KSTLSLQSFSKNLVKYGVIIVDGVEGTSEATEKLCQSLVPVHDTFFGQFWVFSNSATNDE 203
Query: 220 PDYE 223
P YE
Sbjct: 204 PAYE 207
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 218 ITPDYESHHFKELIEAGLSVVLCTDDKGVFATSLSQEYRLCAESFALTRIQVAKLS 273
+TPD + +E AG + VLC + + T L Q+Y+ E +Q KLS
Sbjct: 586 LTPDAIENRLREAANAGCTFVLCITEDNI--TCLHQKYKF-IEHHTQMIVQDMKLS 638
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,234,670
Number of Sequences: 27539
Number of extensions: 294578
Number of successful extensions: 636
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 631
Number of HSP's gapped (non-prelim): 11
length of query: 303
length of database: 12,573,161
effective HSP length: 81
effective length of query: 222
effective length of database: 10,342,502
effective search space: 2296035444
effective search space used: 2296035444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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