Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001277-TA|BGIBMGA001277-PA|IPR001128|Cytochrome P450,
IPR002401|E-class P450, group I
         (452 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    95   1e-21
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    74   2e-15
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    74   3e-15
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.99 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.99 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.99 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   2.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   9.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 95.1 bits (226), Expect = 1e-21
 Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 31/299 (10%)

Query: 142 FDDEMNLWALESIGVVAFGIRLNCFDPNLAENSPEKKLIECVHQIFNLSNQLDFQPSLWH 201
           F++      LES   +  G  L    P+ + +    +L E V   F  S    +   LW 
Sbjct: 203 FEELAYKMGLESTCTLILGRHLGFLKPD-SSSELATRLAEAVRIHFTASRDAFYGLPLWK 261

Query: 202 IFSTPTYKKAMKMFQLQEDLSKYFINKAMRNINKNENKPDE------QKGVLEKLLDINE 255
           +  T  YK+ ++      ++    I   ++   K ++  DE      Q  + +K LDI +
Sbjct: 262 LLPTCAYKQLIESEDAIYNIISEIIETTIQE--KRDDAKDESVEAIFQSILRQKNLDIRD 319

Query: 256 EYAYIMATDMLVAGVDTVANSIAATLYLFAKNPEKQEKLREE------------VMSKES 303
           + A I+  D + AG+ T+ N++     L  +NP  Q KL EE            + +   
Sbjct: 320 KKAAIV--DFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEETYALAPAGCDLTIDNLRK 377

Query: 304 KRYLKACIKETMRMMPVVSGNLRRTTKEYNILGYHVPKGIDVAFAHQDLSSM-EEHYPRP 362
            +YL+ACI E++R++P  +   R   +   + GY +  G  V   H  ++ + EE++   
Sbjct: 378 AKYLRACITESLRLIPTTTCIARILDEPIELSGYRLTAG-TVVLLHTWIAGLNEENFKDA 436

Query: 363 TEFIPERWLADKNDPLYYGKAHPFVMAPFGFGVRSCIGRRIAELEIETFLTKILENFRV 421
            +++PERW              P ++APFG G R C G+R  +L ++  L KI+  F +
Sbjct: 437 KKYLPERWTTPTT------PHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREFEI 489


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 74.1 bits (174), Expect = 2e-15
 Identities = 61/175 (34%), Positives = 85/175 (48%), Gaps = 28/175 (16%)

Query: 267 VAGVDTVANSIAATLYLFAKNPEKQEKLREEVMS------KESK-------RYLKACIKE 313
           +AG +T + +++  LY  A N + Q+KLREE+ +      KE K        YL    KE
Sbjct: 303 LAGFETSSTTMSNALYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDKVFKE 362

Query: 314 TMRMMPVVSGNLRRTTKEY--NILGYHVPKGIDV---AFA-HQDLSSMEEHYPRPTEFIP 367
           T+RM P  S  +R+   +Y  N     +PK + +   AFA H+D +     YP P  F P
Sbjct: 363 TLRMYPPASILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAI----YPNPDSFDP 418

Query: 368 ERWLADKNDPLYYGKAHPFVMAPFGFGVRSCIGRRIAELEIETFLTKILENFRVE 422
           ER+  D          HP    PFG G R+CIG R A  + +  L  IL N +VE
Sbjct: 419 ERFDQDA-----MASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKVE 468


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 73.7 bits (173), Expect = 3e-15
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 25/194 (12%)

Query: 243 QKGVLEKLLDINEEYAYIMATDMLVAGVDTVANSIAATLYLFAKNPEKQEKLREEV--MS 300
           Q GVL    ++ E+   IM       G DT A+  +  L +   +P+ QEK+ +E+  + 
Sbjct: 328 QNGVLLTDKEVKEQVDTIM-----FEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIF 382

Query: 301 KESKR-----------YLKACIKETMRMMPVVSGNLRRTTKEYNILG--YHVPKGIDVAF 347
            +S R           YL+ C+ ET+RM P V    R    +  +    Y +P G  V  
Sbjct: 383 GDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVI 442

Query: 348 AHQDLSSMEEHYPRPTEFIPERWLADKNDPLYYGKAHPFVMAPFGFGVRSCIGRRIAELE 407
               L      YP P  F P+ +L +K         H +   PF  G RSC+GR+ A L+
Sbjct: 443 GTFKLHRQPHIYPNPDVFDPDNFLPEKT-----ANRHYYAFVPFSAGPRSCVGRKYAMLK 497

Query: 408 IETFLTKILENFRV 421
           ++  L+ IL NFRV
Sbjct: 498 LKIVLSTILRNFRV 511


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 299 MSKESKRYLKACIKETMRMMPVVSG-NLRRTTKEYN 333
           + K     LKA IKE    + VVSG ++ R TKEYN
Sbjct: 419 LEKSQDDCLKA-IKENNADLTVVSGGSVLRATKEYN 453


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 299 MSKESKRYLKACIKETMRMMPVVSG-NLRRTTKEYN 333
           + K     LKA IKE    + VVSG ++ R TKEYN
Sbjct: 419 LEKSQDDCLKA-IKENNADLTVVSGGSVLRATKEYN 453


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.99
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 299 MSKESKRYLKACIKETMRMMPVVSG-NLRRTTKEYN 333
           + K     LKA IKE    + VVSG ++ R TKEYN
Sbjct: 419 LEKSQDDCLKA-IKENNADLTVVSGGSVLRATKEYN 453


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 156 VVAFGIRLNCFDPNL 170
           +  +G+ +NC DPNL
Sbjct: 586 LAVYGVWINCLDPNL 600


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 137 RLQAKFDDEMNLWALESIGVVAFGIRLN 164
           R+Q  FD ++ + A+   GV+ FG+  N
Sbjct: 296 RVQDVFDSQLTVKAVSKNGVLLFGLANN 323


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 61   GGSLYTPDTKDFSAKLFKLYG 81
            GG +YT DTK  S+    L+G
Sbjct: 1125 GGGIYTKDTKITSSSETILHG 1145


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 330 KEYNILGYHVPKGIDVAFAHQD 351
           KEY    +H   G   + AHQD
Sbjct: 787 KEYYAASFHTDIGNSQSLAHQD 808


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,419
Number of Sequences: 429
Number of extensions: 6316
Number of successful extensions: 46
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 11
length of query: 452
length of database: 140,377
effective HSP length: 60
effective length of query: 392
effective length of database: 114,637
effective search space: 44937704
effective search space used: 44937704
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)