BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001276-TA|BGIBMGA001276-PA|IPR001128|Cytochrome P450,
IPR002401|E-class P450, group I
(458 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 90 3e-20
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 87 2e-19
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 68 2e-13
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 66 5e-13
AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochr... 51 1e-08
AF264718-1|AAF75271.1| 125|Tribolium castaneum putative cytochr... 48 2e-07
AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450 ... 47 3e-07
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 44 3e-06
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 36 4e-04
AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochr... 33 0.003
AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochr... 33 0.006
AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochr... 32 0.007
AF263515-1|AAF74207.1| 126|Tribolium castaneum cytochrome P450 ... 32 0.007
AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochr... 31 0.017
AF265299-1|AAG17642.1| 63|Tribolium castaneum putative cytochr... 30 0.039
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 25 1.1
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 23 4.5
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 7.8
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 89.8 bits (213), Expect = 3e-20
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 30/359 (8%)
Query: 91 TGLVSDHGELWKSFRSAVNPVLLQPKTIRLYSSALEEVATDMVERLRSLRDENNRIRGQF 150
TGL++ G W++ R + P ++ + E +VE L + E+++
Sbjct: 113 TGLLTSRGPKWQNRRKILTPAF-HFNILQEFIQIFNEETKRLVEDLEA---ESHKPYIDV 168
Query: 151 DQEMNLWSLESIGVVALGNRLNCFDSNLQDDSPVKRLIECVHQMFVLSNELDLKPSIWTY 210
+ ++L SIG A+G +LN D+ D KR + + Q+ + Y
Sbjct: 169 VVPITQFTLLSIGETAMGIKLNASDN---DKDGYKRAVYKIGQLLTYRAPRPWIHNETIY 225
Query: 211 VSTPLFRKTMKMYEEQENLTKYFIKKALDDIKMNKSKSDDEKPVLEKLLDINEEYAYI-- 268
TP RK K+ + + + I + + S +L+ LL E A I
Sbjct: 226 SLTPQGRKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLKYKSEGANIDD 285
Query: 269 -----MASDMLVAGVDTTSNTMSATLYLMAINQDKQQKLREEV----------MSKNGKR 313
+ G DTTS ++ TL L+A +++ Q+++ +E+ +K +
Sbjct: 286 EGIREEVDTFMFEGHDTTSVSICYTLMLLANHREVQEEILKEMEAVLDEEPPTYAKLQEL 345
Query: 314 SYLRACIKEAMRILPVVSGNMRRTTKEYNI-LGYHIPENVDIAFAHQHLSMMEKYYPRPT 372
++ IKE++R+ P V R + E GY IP++ + + +P P
Sbjct: 346 KFMDRVIKESLRLYPSVPFISRVSGSEIQTKTGYTIPKDCMVNLQIYDMHHNPNVFPDPE 405
Query: 373 EFIPERWLTNKSDPLYYGNAHPFANSPFGFGVRSCIGRRIAELEVETFLSKIVENFQVE 431
+F P+R+L P HPFA PF G R+CIG++ A LE++T L I++ F +E
Sbjct: 406 KFDPDRFL-----PENIQKRHPFAYIPFSAGSRNCIGQKFAMLEIKTVLCGILKKFILE 459
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 87.0 bits (206), Expect = 2e-19
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 30/359 (8%)
Query: 91 TGLVSDHGELWKSFRSAVNPVLLQPKTIRLYSSALEEVATDMVERLRSLRDENNRIRGQF 150
TGL++ G W++ R + P ++ + E +VE L + E ++
Sbjct: 113 TGLLTSAGPKWQNRRKILTPAF-HFNILQEFIQIFNEETKRLVEDLEA---ECHKPYIDV 168
Query: 151 DQEMNLWSLESIGVVALGNRLNCFDSNLQDDSPVKRLIECVHQMFVLSNELDLKPSIWTY 210
+ ++L SIG A+G +LN D+ D KR + + Q+ + Y
Sbjct: 169 VVPITQFTLLSIGETAMGIKLNASDN---DKDGYKRAVYKIGQLLTYRAPRPWIYNETIY 225
Query: 211 VSTPLFRKTMKMYEEQENLTKYFIKKALDDIKMNKSKSDDEKPVLEKLLDINEEYAYI-- 268
TP RK K+ + + + I + + S +L+ LL E A I
Sbjct: 226 SLTPQGRKEQKVLKSLHSFSNNVIAERKKHFSSSSYSSRKRLAMLDLLLKYKSEGANIDD 285
Query: 269 -----MASDMLVAGVDTTSNTMSATLYLMAINQDKQQKLREEV----------MSKNGKR 313
+ G DTTS ++ TL L+A +++ Q+++ +E+ +K +
Sbjct: 286 EGIREEVDTFMFEGHDTTSVSICYTLMLLANHREVQEEILKEMEAVLDEEPPTYAKLQEL 345
Query: 314 SYLRACIKEAMRILPVVSGNMRRTTKEYNI-LGYHIPENVDIAFAHQHLSMMEKYYPRPT 372
++ IKE++R+ P V R + E GY IP++ + + +P P
Sbjct: 346 KFMDRVIKESLRLYPSVPFISRVSGSEIQTKTGYTIPKDCMVNLQIYDMHHNPNVFPDPE 405
Query: 373 EFIPERWLTNKSDPLYYGNAHPFANSPFGFGVRSCIGRRIAELEVETFLSKIVENFQVE 431
+F P+R+L P HPFA PF G R+CIG++ A LE++T L I++ F +E
Sbjct: 406 KFDPDRFL-----PENIQKRHPFAYIPFSAGSRNCIGQKFAMLEIKTVLCGILKKFILE 459
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 67.7 bits (158), Expect = 2e-13
Identities = 83/368 (22%), Positives = 154/368 (41%), Gaps = 39/368 (10%)
Query: 91 TGLVSDHGELWKSFRSAVNPVLLQPKTIRLYSSALEEVATDMVERLRSLRDENNRIRGQF 150
TGL++ G W++ R + P ++ + + E +VE L++E +
Sbjct: 120 TGLLTSTGLKWQTRRKILTPAF-HFSILQQFVAIFNEETDKLVE---VLKEECYKPFVNV 175
Query: 151 DQEMNLWSLESIGVVALGNRLN-------CFDSNLQD--DSPVKRLIEC--VHQMFVLSN 199
+ + ++L++I A+G +L + ++ D + + RL+ C + + + N
Sbjct: 176 NAHVAQFTLKTIAETAMGTKLRFTTRKETIYKQSIVDMGEFLLYRLLRCWLISKCIYVFN 235
Query: 200 ELDLKPSIWTYVSTPLFRKTMKMYEEQENLTKYFIKKALDDIKMNKSKS---DDEKPVLE 256
+ + V+ L R T + E++ K + D++ K + D
Sbjct: 236 P---RYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEVYTGKRRLAMLDLLLTAKN 292
Query: 257 KLLDINEEYAYIMASDMLVAGVDTTSNTMSATLYLMAINQDKQQKLREEVMSKNG----- 311
K I++E + G DTT+ + L ++A +++ Q K+ EE+ G
Sbjct: 293 KEGLIDDEGIREEVDTFMFEGHDTTAAALGFALMVLAGHKEVQDKIVEEMNEVLGDIKKK 352
Query: 312 -------KRSYLRACIKEAMRILPVVSGNMRRTTKEYNILGYHIPENVDIAFAHQH-LSM 363
+ YL C+KE +R+ P V R+ ++ H I H + L
Sbjct: 353 PTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDLVTHSGHKLAKASIVNLHIYDLHH 412
Query: 364 MEKYYPRPTEFIPERWLTNKSDPLYYGNAHPFANSPFGFGVRSCIGRRIAELEVETFLSK 423
YP P +F P+R+L HPFA PF G R+CIG++ A LE++ +
Sbjct: 413 NPAIYPDPEKFDPDRFLPENCQ-----KRHPFAYLPFSAGPRNCIGKKFAMLELKAAICG 467
Query: 424 IVENFQVE 431
I+ NF +E
Sbjct: 468 ILANFTLE 475
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 66.1 bits (154), Expect = 5e-13
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 277 GVDTTSNTMSATLYLMAINQDKQQKLREEVMSKNG------------KRSYLRACIKEAM 324
G DTT+ + L ++A +++ Q K+ EE+ G + YL C+KE +
Sbjct: 313 GHDTTAAALGFALMVLAGHKEVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVL 372
Query: 325 RILPVVSGNMRRTTKEYNILGYHIPENVDIAFAHQH-LSMMEKYYPRPTEFIPERWLTNK 383
R+ P V R+ ++ H I H + L YP P +F P+R+L
Sbjct: 373 RLYPSVHFISRKLGEDLVTHSGHKLAKGSIVNLHIYDLHHNPAIYPDPEKFDPDRFLPEN 432
Query: 384 SDPLYYGNAHPFANSPFGFGVRSCIGRRIAELEVETFLSKIVENFQVE 431
HPFA PF G R+CIG++ A LE++ + I+ NF +E
Sbjct: 433 CQ-----KRHPFAYLPFSAGPRNCIGKKFAMLELKAAICGILANFTLE 475
>AF265298-1|AAG17641.1| 124|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 124
Score = 51.2 bits (117), Expect = 1e-08
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Query: 280 TTSNTMSATLYLMAINQDKQQKLREEV-----------MSKNGKRSYLRACIKEAMRILP 328
TTS A L L A N Q+KL EEV M + + YL +KEA R+ P
Sbjct: 1 TTSGIAFAILCL-AENPKVQEKLYEEVAAVIDNIENITMQQLQEMKYLEMVLKEAQRLYP 59
Query: 329 VVSGNMRRTTKEYNILGYHIPENVDIAFAHQHLSMMEKYYPRPTEFIPERWL 380
V RR + NI GY P++ ++ + EKY+P P +F P R+L
Sbjct: 60 SVPVIERRLEVDCNIGGYDFPKDTFLSLFIYGMHHNEKYFPEPEKFDPNRYL 111
>AF264718-1|AAF75271.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q6 protein.
Length = 125
Score = 47.6 bits (108), Expect = 2e-07
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 281 TSNTMSATLYLMAINQDKQQKLREEVMSKNGKR-----------SYLRACIKEAMRILPV 329
TS +S L +A QD Q K+REE++S GK Y + CIKE +R+ P
Sbjct: 1 TSMAISFILLTLANLQDIQTKVREEILSVVGKEKIPTYNDLQELKYTKRCIKETLRLFPS 60
Query: 330 VSGNMRRTTKEY-NILGYHIPENVDIAFAHQHLSMMEKYYPRPTEFIPERWLTNKSDPLY 388
V R ++++ G IPE + L + YP +F P+R+L +K
Sbjct: 61 VPFISRYASEDFVTKTGNTIPEGTVLHIHIFDLHRNAEIYPDLLKFDPDRFLPDK----- 115
Query: 389 YGNAHPFA 396
HPFA
Sbjct: 116 VNERHPFA 123
>AY920544-1|AAX62142.1| 463|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 463
Score = 46.8 bits (106), Expect = 3e-07
Identities = 91/425 (21%), Positives = 158/425 (37%), Gaps = 58/425 (13%)
Query: 32 IVRIDSMFSKDAIVLLYDAESAGIILRNENNMPIRISFKSLSYYRQKYKKSE-NDRTDRP 90
I I F D V Y + ++LR+ + +I K + S N
Sbjct: 15 IADIYRQFPTDRYVGYYHFMTPTLLLRDVELIK-QIGVKEFDSFHDHVSVSNTNTEPLLS 73
Query: 91 TGLVSDHGELWKSFRSAVNPVLLQPKTIRLYSSALEEVATDMVERLRSLRDENNRIRGQF 150
L + GE WK R+ ++P K +YS + E A + V+ + R+++ I+ F
Sbjct: 74 EALTNLPGEKWKEMRATLSPAFTSSKIKNMYS-LISECAENFVDFFQG-REQDVEIKEVF 131
Query: 151 DQEMNLWSLESIGVVALGNRLNCFDSNLQDDSPVKRLIECVHQMFVLSNEL-DLKPSIWT 209
+ N + I A G R+N + + R + +L L L P I
Sbjct: 132 SRFSN----DVIATAAFGIRVNSVQEPNNEFYAMGRSLTTFSAFQILKIFLAHLVPKIAE 187
Query: 210 YVSTPLF-RKTMKMYE----------EQENLTKYFIKKALDDIKMNKSKSDDEKPVLE-- 256
+ + RK +E E E + + + L + + K K D+ E
Sbjct: 188 FFEYRVLPRKVTDFFEGLILDNMQKREAEKIVRPDLIHLLMEARKGKLKHDNSNEGGEGF 247
Query: 257 ------------KLLDINEEYAYIMASDMLVAGVDTTSNTMSATLYLMAINQDKQQKLRE 304
K +++ +E A AG +T S +S Y +A N Q+KL++
Sbjct: 248 ATVEESEIGKNTKQVELTDEKIVAQALLFFFAGFETVSTGVSFMAYELATNPHVQKKLQK 307
Query: 305 EV----MSKNGKRSY--------LRACIKEAMRILPVVSGNMRRTTKEYNILG------- 345
E+ +GK SY L + E++R+ P R K + I
Sbjct: 308 EIDLTLQENHGKISYNVLQSMKYLDQVVCESLRLWPPAPQTDRLCNKNFVIEASKPHERT 367
Query: 346 YHIPENVDIAFAHQHLSMMEKYYPRPTEFIPERWLTNKSDPLYYGNAHPFANSPFGFGVR 405
+ + ++ + + + +Y+P P +F PER+ + P PFG G R
Sbjct: 368 FTVEKDTMVMISMFAIHRDPQYFPDPEKFDPERFSDENKAKIV-----PGTYMPFGVGPR 422
Query: 406 SCIGR 410
+CI +
Sbjct: 423 NCIAK 427
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 43.6 bits (98), Expect = 3e-06
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 281 TSNTMSATLYLMAINQDKQQKLREEVMSKNG------------KRSYLRACIKEAMRILP 328
T+ S L +M ++QD Q K+ +E+ G + YL C+ E +R+ P
Sbjct: 1 TAAGSSFFLSMMGVHQDIQDKVVQELYDIFGDSDRPATFADTLEMKYLERCLMETLRMFP 60
Query: 329 VVSGNMRRTTKEYNILG--YHIPENVDIAFAHQHLSMMEKYYPRPTEFIPERWLTNKSDP 386
V R+ ++ + Y +P + + +E+YYP P +F P+ +L ++
Sbjct: 61 PVPIIARQLNQDLKLASGDYTVPAGCTVVIGTFKVHRLEEYYPNPDKFDPDNFLPERTAN 120
Query: 387 LYY 389
+Y
Sbjct: 121 RHY 123
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 36.3 bits (80), Expect = 4e-04
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 315 YLRACIKEAMRILPVVSGNMRRTTKEYNI-LGYHIPENVDIAFAHQHLSMMEKYYPRPTE 373
YL CIKE++R+ P V R ++ GY IP++ L YP P +
Sbjct: 47 YLERCIKESLRLYPSVHLISRALGEDVRTQKGYLIPKDTITIIHIYDLHHNPDIYPDPEK 106
Query: 374 FIPERWLTNKSDPLYYGNAHPFA 396
F P+R+L P HP+A
Sbjct: 107 FDPDRFL-----PENVQKRHPYA 124
>AF265213-1|AAF75277.1| 143|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q3 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.003
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 315 YLRACIKEAMRILPVVSGNMRRTTKEY-NILGYHIPENVDIAFAHQHLSMMEKYYPRPTE 373
YL IKE++R+ P V R+ +++ G +P++ L YP P +
Sbjct: 64 YLERAIKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEK 123
Query: 374 FIPERWLTNKSDPLYYGNAHPFA 396
F PER+ S HPFA
Sbjct: 124 FDPERFRPENSQ-----KRHPFA 141
>AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 126
Score = 32.7 bits (71), Expect = 0.006
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 315 YLRACIKEAMRILPVVSGNMRRTTKEYNILG--YHIPENVDIAFAHQHLSMMEKYYPRPT 372
YL + E +R+ P V R +E + Y +P + + KY+P P
Sbjct: 47 YLERVLLETLRMYPPVPIITRVINEEVKLASGDYTLPVGTTVGIGQFLVHRNPKYFPNPD 106
Query: 373 EFIPERWLTNKSDPLYY 389
+F P+ +L + +Y
Sbjct: 107 KFDPDNFLPERCQQRHY 123
>AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q1 protein.
Length = 126
Score = 32.3 bits (70), Expect = 0.007
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 315 YLRACIKEAMRILPVVSGNMRRTTKE-YNILGYHIPENVDIAFAHQHLSMMEKYYPRPTE 373
YL CIKE +R+ P V R ++ GY +P+ + + YP P +
Sbjct: 47 YLERCIKETLRLYPSVHFISRTLGQDLITTGGYTLPKESNAIIHIYDVHRNADIYPDPEK 106
Query: 374 FIPERWLTNKSDPLYYGNAHPFA 396
P+R+L P HP+A
Sbjct: 107 LDPDRFL-----PENVQKRHPYA 124
>AF263515-1|AAF74207.1| 126|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 126
Score = 32.3 bits (70), Expect = 0.007
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 315 YLRACIKEAMRILPVVSGNMRRTTKEY-NILGYHIPENVDIAFAHQHLSMMEKYYPRPTE 373
Y+ IKE +R+ P V R ++ GY + + + L YP P +
Sbjct: 47 YMERVIKEVLRLYPSVHYISRELGEDMVTTTGYKLRKGTILQLHIYDLHYNPVIYPEPEK 106
Query: 374 FIPERWLTNKSDPLYYGNAHPFA 396
F P+R+L D HP+A
Sbjct: 107 FDPDRFLPENCD-----KRHPYA 124
>AF265297-1|AAG17640.1| 125|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 125
Score = 31.1 bits (67), Expect = 0.017
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 315 YLRACIKEAMRILPVVSGNMRRTTKEYNILGYHIPENVDIAFAHQHLSMME---KYYPRP 371
Y+ CIKE +R+ P V R ++ I+ Y + + H H+ M + YP P
Sbjct: 46 YMERCIKEVLRLYPSVPFIARSLGED--IVTYSGHKLKAGSMVHLHIYDMHHNPQVYPDP 103
Query: 372 TEFIPERWL 380
+F P+R+L
Sbjct: 104 EKFDPDRFL 112
>AF265299-1|AAG17642.1| 63|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 63
Score = 29.9 bits (64), Expect = 0.039
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
Query: 281 TSNTMSATLYLMAINQDKQQKLREEVMSKNGKR-------------SYLRACIKEAMRIL 327
T++ +S LY +A N + Q+K EE ++ GK YL IKEA+R+
Sbjct: 1 TASGISFALYCLANNPEAQEKAYEEQVALFGKEKKPIVSYSDLQEMKYLELVIKEALRLY 60
Query: 328 PVV 330
P+V
Sbjct: 61 PLV 63
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 25.0 bits (52), Expect = 1.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 81 KSENDRTDRPTGLVSDHGELWKSFRSAVNPVLLQPKTIRLY 121
KS+ D T+R + D +LW F N +++ R++
Sbjct: 18 KSKGDPTERDLIVTLDDRDLWLRFECLTNEMIVTKNGRRMF 58
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 23.0 bits (47), Expect = 4.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 176 SNLQDDSPVKRLIE 189
SNLQ D P++R+IE
Sbjct: 175 SNLQADMPLERIIE 188
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.2 bits (45), Expect = 7.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 80 KKSENDRTDRPTGLVSDHGELWKSFRSAVNP 110
K+S ++ RPTG ++ HG S + +P
Sbjct: 240 KESPQMQSYRPTGNITPHGSNTSSLITTPSP 270
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.319 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,739
Number of Sequences: 317
Number of extensions: 4920
Number of successful extensions: 36
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 19
length of query: 458
length of database: 114,650
effective HSP length: 59
effective length of query: 399
effective length of database: 95,947
effective search space: 38282853
effective search space used: 38282853
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
- SilkBase 1999-2023 -