GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001275-TA|BGIBMGA001275-PA|IPR002052|N-6
Adenine-specific DNA methylase, IPR007484|Peptidase M28
         (409 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   3.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   4.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   4.9  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 287 KHINETSNINFIMESDEGTFKPLGLDVAGSTNARCIIAEVL 327
           +H+     + F   +DE    P+G+ +  + + RCI+A ++
Sbjct: 469 QHVTRVRLVQFQKNTDE----PMGITLKMTEDGRCIVARIM 505


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 49  PYWQRIYESANMFEPYLKKISILGLGTSVSTPAEGIKAEAIVIKSFDELEKTDENKIKGK 108
           P WQ +Y+S  + E +    + LGL T+  T    I   +  + S   L+     K+ G+
Sbjct: 166 PLWQ-LYDSPTLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVYMLDNNYHPKLVGR 224


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 49  PYWQRIYESANMFEPYLKKISILGLGTSVSTPAEGIKAEAIVIKSFDELEKTDENKIKGK 108
           P WQ +Y+S  + E +    + LGL T+  T    I   +  + S   L+     K+ G+
Sbjct: 166 PLWQ-LYDSPTLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVYMLDNNYHPKLVGR 224


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,669
Number of Sequences: 2123
Number of extensions: 15228
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 3
length of query: 409
length of database: 516,269
effective HSP length: 66
effective length of query: 343
effective length of database: 376,151
effective search space: 129019793
effective search space used: 129019793
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)