Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001274-TA|BGIBMGA001274-PA|IPR003137|Protease-associated
PA, IPR007484|Peptidase M28
         (472 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro...    32   1.5  
AY047570-1|AAK77302.1|  941|Drosophila melanogaster GH08340p pro...    32   1.5  
AE014134-2945|AAF53679.1|  941|Drosophila melanogaster CG10413-P...    32   1.5  
AY061457-1|AAL29005.1|  257|Drosophila melanogaster LD40493p pro...    32   2.0  
AE014297-2817|AAF55779.2|  284|Drosophila melanogaster CG4217-PB...    32   2.0  
AE014297-2816|AAN14356.1|  257|Drosophila melanogaster CG4217-PA...    32   2.0  
AB045318-1|BAB20089.1|  257|Drosophila melanogaster mitochondria...    32   2.0  
AB040745-1|BAB62223.1|  257|Drosophila melanogaster mitochondria...    32   2.0  
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ...    31   3.4  
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro...    31   3.4  
BT010302-1|AAQ23620.1|  891|Drosophila melanogaster LD02432p pro...    31   3.4  
BT001412-1|AAN71167.1|  867|Drosophila melanogaster GH11271p pro...    31   3.4  
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA...    31   3.4  
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC...    31   3.4  
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB...    31   3.4  
AE013599-2863|AAF57575.1|  891|Drosophila melanogaster CG11961-P...    31   3.4  
AE013599-2862|AAF57574.2|  867|Drosophila melanogaster CG11961-P...    31   3.4  
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti...    31   3.4  
AY089644-1|AAL90382.1|  611|Drosophila melanogaster RE71924p pro...    31   4.5  
AE014296-1555|AAN11979.1|  611|Drosophila melanogaster CG5651-PB...    31   4.5  
AE014296-1554|AAF50342.1|  611|Drosophila melanogaster CG5651-PA...    31   4.5  

>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
          Length = 2096

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1011 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1069

Query: 273  IDLKGSVHPEKLVIVSGHIDSWDVG 297
            ID+  ++  EK       ID +  G
Sbjct: 1070 IDVVRTLSTEKAKAGEEGIDKFSRG 1094


>AY047570-1|AAK77302.1|  941|Drosophila melanogaster GH08340p
           protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 30  NLLGDELIAEILSYEKVKDEILNYVLQGDFKG 61
           NL+G   I E LS ++V   +LN+V+ G +KG
Sbjct: 389 NLIGSSRILEALSKDQVFGSLLNFVIHGTWKG 420


>AE014134-2945|AAF53679.1|  941|Drosophila melanogaster CG10413-PA
           protein.
          Length = 941

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 30  NLLGDELIAEILSYEKVKDEILNYVLQGDFKG 61
           NL+G   I E LS ++V   +LN+V+ G +KG
Sbjct: 389 NLIGSSRILEALSKDQVFGSLLNFVIHGTWKG 420


>AY061457-1|AAL29005.1|  257|Drosophila melanogaster LD40493p
           protein.
          Length = 257

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 30/125 (24%), Positives = 46/125 (36%)

Query: 151 IVFENYDQLDKALDEDVRGKIVLYDPIFTTYSETNQYRTQXXXXXXXXXXXXSLVRSIAP 210
           I  E   + D  L E+ R +I           E  Q R +            + +R IA 
Sbjct: 110 IYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS 169

Query: 211 FSINSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRN 270
             IN+P    QTY +   K       L D++    M +  + + L  K  S  + K+ R 
Sbjct: 170 ERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRL 229

Query: 271 TIIDL 275
             ID+
Sbjct: 230 GHIDV 234


>AE014297-2817|AAF55779.2|  284|Drosophila melanogaster CG4217-PB,
           isoform B protein.
          Length = 284

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 30/125 (24%), Positives = 46/125 (36%)

Query: 151 IVFENYDQLDKALDEDVRGKIVLYDPIFTTYSETNQYRTQXXXXXXXXXXXXSLVRSIAP 210
           I  E   + D  L E+ R +I           E  Q R +            + +R IA 
Sbjct: 137 IYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS 196

Query: 211 FSINSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRN 270
             IN+P    QTY +   K       L D++    M +  + + L  K  S  + K+ R 
Sbjct: 197 ERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRL 256

Query: 271 TIIDL 275
             ID+
Sbjct: 257 GHIDV 261


>AE014297-2816|AAN14356.1|  257|Drosophila melanogaster CG4217-PA,
           isoform A protein.
          Length = 257

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 30/125 (24%), Positives = 46/125 (36%)

Query: 151 IVFENYDQLDKALDEDVRGKIVLYDPIFTTYSETNQYRTQXXXXXXXXXXXXSLVRSIAP 210
           I  E   + D  L E+ R +I           E  Q R +            + +R IA 
Sbjct: 110 IYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS 169

Query: 211 FSINSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRN 270
             IN+P    QTY +   K       L D++    M +  + + L  K  S  + K+ R 
Sbjct: 170 ERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRL 229

Query: 271 TIIDL 275
             ID+
Sbjct: 230 GHIDV 234


>AB045318-1|BAB20089.1|  257|Drosophila melanogaster mitochondrial
           transcription factorA protein.
          Length = 257

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 30/125 (24%), Positives = 46/125 (36%)

Query: 151 IVFENYDQLDKALDEDVRGKIVLYDPIFTTYSETNQYRTQXXXXXXXXXXXXSLVRSIAP 210
           I  E   + D  L E+ R +I           E  Q R +            + +R IA 
Sbjct: 110 IYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS 169

Query: 211 FSINSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRN 270
             IN+P    QTY +   K       L D++    M +  + + L  K  S  + K+ R 
Sbjct: 170 ERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRL 229

Query: 271 TIIDL 275
             ID+
Sbjct: 230 GHIDV 234


>AB040745-1|BAB62223.1|  257|Drosophila melanogaster mitochondrial
           transcription factorA protein.
          Length = 257

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 30/125 (24%), Positives = 46/125 (36%)

Query: 151 IVFENYDQLDKALDEDVRGKIVLYDPIFTTYSETNQYRTQXXXXXXXXXXXXSLVRSIAP 210
           I  E   + D  L E+ R +I           E  Q R +            + +R IA 
Sbjct: 110 IYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS 169

Query: 211 FSINSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRN 270
             IN+P    QTY +   K       L D++    M +  + + L  K  S  + K+ R 
Sbjct: 170 ERINTPQGDKQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKMIRL 229

Query: 271 TIIDL 275
             ID+
Sbjct: 230 GHIDV 234


>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
            factor TFIID 230kda subunit protein.
          Length = 2068

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1014 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1072

Query: 273  IDLKGSVHPEK 283
            ID+  ++  EK
Sbjct: 1073 IDVVRTLSTEK 1083


>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
          Length = 1964

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1011 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1069

Query: 273  IDLKGSVHPEK 283
            ID+  ++  EK
Sbjct: 1070 IDVVRTLSTEK 1080


>BT010302-1|AAQ23620.1|  891|Drosophila melanogaster LD02432p
           protein.
          Length = 891

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 285 VIVSGHIDSWDVGQGAMDDGGGLFISWAAPVILKRLNLIPKRTVRSIFWTAEELGLVGAY 344
           ++V+ H DS   G GA DDG  +        +L + +   K  V  +F  AEE  L  ++
Sbjct: 183 LLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKNPVVFLFNGAEENPLQASH 242

Query: 345 AYEEAHR 351
           A+   H+
Sbjct: 243 AFITQHK 249


>BT001412-1|AAN71167.1|  867|Drosophila melanogaster GH11271p
           protein.
          Length = 867

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 285 VIVSGHIDSWDVGQGAMDDGGGLFISWAAPVILKRLNLIPKRTVRSIFWTAEELGLVGAY 344
           ++V+ H DS   G GA DDG  +        +L + +   K  V  +F  AEE  L  ++
Sbjct: 159 LLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKNPVVFLFNGAEENPLQASH 218

Query: 345 AYEEAHR 351
           A+   H+
Sbjct: 219 AFITQHK 225


>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
            isoform A protein.
          Length = 2065

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1011 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1069

Query: 273  IDLKGSVHPEK 283
            ID+  ++  EK
Sbjct: 1070 IDVVRTLSTEK 1080


>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
            isoform C protein.
          Length = 2098

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1011 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1069

Query: 273  IDLKGSVHPEK 283
            ID+  ++  EK
Sbjct: 1070 IDVVRTLSTEK 1080


>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
            isoform B protein.
          Length = 2129

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1011 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1069

Query: 273  IDLKGSVHPEK 283
            ID+  ++  EK
Sbjct: 1070 IDVVRTLSTEK 1080


>AE013599-2863|AAF57575.1|  891|Drosophila melanogaster CG11961-PA,
           isoform A protein.
          Length = 891

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 285 VIVSGHIDSWDVGQGAMDDGGGLFISWAAPVILKRLNLIPKRTVRSIFWTAEELGLVGAY 344
           ++V+ H DS   G GA DDG  +        +L + +   K  V  +F  AEE  L  ++
Sbjct: 183 LLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKNPVVFLFNGAEENPLQASH 242

Query: 345 AYEEAHR 351
           A+   H+
Sbjct: 243 AFITQHK 249


>AE013599-2862|AAF57574.2|  867|Drosophila melanogaster CG11961-PB,
           isoform B protein.
          Length = 867

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 285 VIVSGHIDSWDVGQGAMDDGGGLFISWAAPVILKRLNLIPKRTVRSIFWTAEELGLVGAY 344
           ++V+ H DS   G GA DDG  +        +L + +   K  V  +F  AEE  L  ++
Sbjct: 159 LLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDKPLKNPVVFLFNGAEENPLQASH 218

Query: 345 AYEEAHR 351
           A+   H+
Sbjct: 219 AFITQHK 225


>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
            factor protein.
          Length = 2065

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 213  INSPHTGSQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTI 272
            +  P+  +QT  ++ ++ P  ++T  DADL R    R + ++   K+      K+SR  +
Sbjct: 1011 VRVPNKPTQTKEEQESQ-PKRSVTGTDADLRRLPLQRAKELLRQFKVPEEEIKKLSRWEV 1069

Query: 273  IDLKGSVHPEK 283
            ID+  ++  EK
Sbjct: 1070 IDVVRTLSTEK 1080


>AY089644-1|AAL90382.1|  611|Drosophila melanogaster RE71924p
           protein.
          Length = 611

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 220 SQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTIIDLKGSV 279
           +Q  G E  +   A + +++AD+   M+D         + SS LD K   N  + ++  +
Sbjct: 223 AQLSGGELQRFAIAMVCIQNADIF--MFD---------EPSSYLDVKQRLNAALTIRSLL 271

Query: 280 HPEKLVIVSGH 290
           HP K +IV  H
Sbjct: 272 HPTKFIIVVEH 282


>AE014296-1555|AAN11979.1|  611|Drosophila melanogaster CG5651-PB,
           isoform B protein.
          Length = 611

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 220 SQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTIIDLKGSV 279
           +Q  G E  +   A + +++AD+   M+D         + SS LD K   N  + ++  +
Sbjct: 223 AQLSGGELQRFAIAMVCIQNADIF--MFD---------EPSSYLDVKQRLNAALTIRSLL 271

Query: 280 HPEKLVIVSGH 290
           HP K +IV  H
Sbjct: 272 HPTKFIIVVEH 282


>AE014296-1554|AAF50342.1|  611|Drosophila melanogaster CG5651-PA,
           isoform A protein.
          Length = 611

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 220 SQTYGDEANKIPTAAITLEDADLIRRMYDRGENIVLNIKMSSTLDTKVSRNTIIDLKGSV 279
           +Q  G E  +   A + +++AD+   M+D         + SS LD K   N  + ++  +
Sbjct: 223 AQLSGGELQRFAIAMVCIQNADIF--MFD---------EPSSYLDVKQRLNAALTIRSLL 271

Query: 280 HPEKLVIVSGH 290
           HP K +IV  H
Sbjct: 272 HPTKFIIVVEH 282


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.135    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,779,636
Number of Sequences: 52641
Number of extensions: 921695
Number of successful extensions: 2016
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2004
Number of HSP's gapped (non-prelim): 21
length of query: 472
length of database: 24,830,863
effective HSP length: 88
effective length of query: 384
effective length of database: 20,198,455
effective search space: 7756206720
effective search space used: 7756206720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)