Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001273-TA|BGIBMGA001273-PA|IPR012776|Trimethyllysine
dioxygenase, IPR003819|Taurine catabolism dioxygenase TauD/TfdA
(232 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47
SB_21840| Best HMM Match : Gamma-BBH (HMM E-Value=0.00043) 139 2e-33
SB_28563| Best HMM Match : Gamma-BBH (HMM E-Value=0) 97 1e-20
SB_10794| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_10799| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_35553| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_13909| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 35 0.066
SB_42561| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39) 31 0.81
SB_53489| Best HMM Match : Pox_F15 (HMM E-Value=3.2) 30 1.4
SB_53533| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_53490| Best HMM Match : Orthopox_C1 (HMM E-Value=8.6) 30 1.4
SB_41690| Best HMM Match : DSL (HMM E-Value=0) 29 4.3
SB_45060| Best HMM Match : DSL (HMM E-Value=3e-07) 28 5.7
SB_35208| Best HMM Match : EGF_CA (HMM E-Value=1.2e-09) 28 5.7
SB_57417| Best HMM Match : Death (HMM E-Value=1.8) 28 7.5
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 27 10.0
>SB_39157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 184 bits (449), Expect = 4e-47
Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 12/230 (5%)
Query: 1 YTFKSFNQVQPSAEATETVCKALGG-IQHTIFGATWEFTT-VADHADTAYTNLPLAAHND 58
Y F N A E + K+LG ++ T FG W F+ V DHADTAYT+ L AHND
Sbjct: 85 YGFAFVNDTPTELSAVEKLAKSLGCFVRETHFGRLWAFSNEVMDHADTAYTSGFLHAHND 144
Query: 59 NIYWTEAAGLQILHCIEHTNGTGGETILVDGFYGATCLKEDHPEDYEFLTTYEIEGEYIE 118
N Y+T AGLQ+LHC+ H +G GGE++LVDGF A LK++HP Y FL T E
Sbjct: 145 NTYYTSPAGLQMLHCVHH-DGKGGESLLVDGFNAANELKKEHPGAYTFLNTNE------- 196
Query: 119 RRHHFTHSAPVIQIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKE 178
H P I++D ++D QIR+N YDR+ + D YY++++ A E
Sbjct: 197 --RHLKAFGPTIELDPFSKDFHQIRYNHYDRAVIDCLESDDVPSYYKAIQAYAEILRRPE 254
Query: 179 NQWIFKLVPGLVMVIDNFRLLHGRNGFTGRRVLCGAYVSRSDWLDKARSL 228
+++ FKLVPG +MV+ N+R++HGRN FTGRR + G YV + +L + SL
Sbjct: 255 SEYWFKLVPGQLMVMGNWRVMHGRNRFTGRRDMQGCYVDKDYFLGQYWSL 304
>SB_21840| Best HMM Match : Gamma-BBH (HMM E-Value=0.00043)
Length = 166
Score = 139 bits (337), Expect = 2e-33
Identities = 67/159 (42%), Positives = 99/159 (62%), Gaps = 1/159 (0%)
Query: 70 ILHCIEHTNGTGGETILVDGFYGATCLKEDHPEDYEFLTTYEIEGEYIERRHHFTHSAPV 129
+LHC+ H +G GGE++LVDGF A LK++HP Y FLTT + YI+ H P
Sbjct: 1 MLHCVHH-DGKGGESLLVDGFNAANELKKEHPGAYTFLTTKVLPYRYIDSERHLKAFGPT 59
Query: 130 IQIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQWIFKLVPGL 189
I++D ++D QIR+N YDR+ + D YY++++ A E+++ FKLVPG
Sbjct: 60 IELDPFSKDFHQIRYNHYDRAVIDCLESDDVPSYYKAIQAYAEILRRPESEYWFKLVPGQ 119
Query: 190 VMVIDNFRLLHGRNGFTGRRVLCGAYVSRSDWLDKARSL 228
+MV+ N+R++HGRN FTGRR + G YV + +L + SL
Sbjct: 120 LMVMGNWRVMHGRNRFTGRRDMQGCYVDKDYFLGQYWSL 158
>SB_28563| Best HMM Match : Gamma-BBH (HMM E-Value=0)
Length = 448
Score = 97.1 bits (231), Expect = 1e-20
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 17 ETVCKALGGIQHTIFGATWEFTTVADHADTAYTNLPLAAHNDNIYWTEAAGLQILHCIEH 76
E + KA+G I+ T++G T + YTNL L H+D IY+ + ILHCIE
Sbjct: 221 ERIGKAVGFIRPTLYGVTVPLRLNPHATNLGYTNLGLRPHSDLIYYELKPSVFILHCIEQ 280
Query: 77 TNGTGGETILVDGFYGATCLKEDHPEDYEFLTTYEI---------EGEYIERRHHFTHSA 127
TGGE+I VDG+ A +E +PE + +T+ + GE ++ +++
Sbjct: 281 VK-TGGESIFVDGYRVAEAFREANPEAFALMTSTPVLHRATGVQPNGEGFDQ----SYAR 335
Query: 128 PVIQIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQWIFKLVP 187
P+I++D I++I FN R + Y + LAR + + KL P
Sbjct: 336 PIIELDM-AGRIRRINFNDSHREDFPDTTPEQLPKIYEAYHELARMLSDPKFFIQHKLSP 394
Query: 188 GLVMVIDNFRLLHGRNGF 205
G + IDN R+LHGRNGF
Sbjct: 395 GEICAIDNDRMLHGRNGF 412
>SB_10794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 86.2 bits (204), Expect = 2e-17
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 15 ATETVCKALGGIQHTIFGATWEFTTVADHADTAYTNLPLAAHNDNIYWTEAAGLQILHCI 74
A E + K +G +Q + +G T++ D + AYT L H D G+Q+LHC+
Sbjct: 201 AVERLAKRVGYVQDSHYGHTFDVNAKFDANNLAYTTADLPLHCDVPQLEYYPGVQMLHCL 260
Query: 75 EHTNGTGGETILVDGFYGATCLKEDHPEDYEFLTTYEIEGEYIERRH----HFTHSAPVI 130
+ GGE+I VDGF+ A +KE HP + L T I I + H + I
Sbjct: 261 KQAPTEGGESIFVDGFFIAQEIKEQHPRLFNLLATTPIPFVDIGKDEFGDFHLMNKRKTI 320
Query: 131 QIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQWIFKLVPGLV 190
++D+ I + ++ + R +L Y++ L++ + N +KL PG V
Sbjct: 321 ELDE-LGHIVRFAYSNHMRDYFMDSPVEKVQLLYQAYLILSQMMRDPVNMIEYKLSPGEV 379
Query: 191 MVIDNFRLLHGRNG 204
+ +N R+LHGR G
Sbjct: 380 VSFNNSRVLHGRRG 393
>SB_10799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 85.4 bits (202), Expect = 4e-17
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 13/214 (6%)
Query: 26 IQHTIFGATWEFTTVADHADTAYTNLPLAAHNDNIYWTEAAGLQILHCIEHTNGTGGETI 85
+Q + T++ D + AYT L H D G+Q+LHC++ GGE+I
Sbjct: 156 LQGKLVSHTFDVNAKFDANNLAYTTADLPLHCDIPQSEYYPGVQMLHCLQQAPTEGGESI 215
Query: 86 LVDGFYGATCLKEDHPEDYEFLTTYEIEGEYIERRH----HFTHSAPVIQIDKNTEDIKQ 141
VDGF+ A +KE HP + L T I I + H + I++D+ I +
Sbjct: 216 FVDGFFIAQEIKEQHPRLFNLLATTPIPYVDIGKDEFGDFHLKNKRESIELDE-LGHIVR 274
Query: 142 IRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQWIFKLVPGLVMVIDNFRLLHG 201
+N + R +L Y++ L + + N +KL PG V+ +N R+LHG
Sbjct: 275 FTYNNHVRDYFMDSPVEKVQLLYQAYLILGQMMRDPVNMLEYKLSPGEVVSFNNSRVLHG 334
Query: 202 RNGFT----GRRVLCGAYVSRSDW-LDKARSLNL 230
R G+T G R L G Y+ DW L AR NL
Sbjct: 335 RRGYTITGEGNRHLQGCYM---DWDLVNARLRNL 365
>SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 78.6 bits (185), Expect = 4e-15
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 22 ALGGIQHTIFGATWEFTTVADHADTAYTNLPLAAHNDNIYWTEAAGLQILHCIEHTNGTG 81
A+G ++ T +G++ + AYT L H D Y+ + +LHCI+ +G
Sbjct: 223 AVGFLRKTFYGSSVALRSEPQARSLAYTGYELQPHTDLPYYEFKPSVILLHCIDQVRSSG 282
Query: 82 GETILVDGFYGATCLKEDHPEDYEFLTT----YEIEG-EYIERRHHFTHSAPVIQIDKNT 136
GE VDG+ + D+P+ ++ L + + ++G E + P+I++D
Sbjct: 283 GENTFVDGYSILKAFRNDNPDGFDLLASTPVLHRVKGVEPTYGEFEQLFARPIIELDVKG 342
Query: 137 EDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQWIFKLVPGLVMVIDNF 196
I++I FN R YR+ L + + + K+ PG + IDN
Sbjct: 343 R-IRRINFNDPLREEFLDTPAEQIPKVYRAYHKLTQMFYEPKFIVRNKMAPGDICAIDND 401
Query: 197 RLLHGRNGFTGR----RVLCGAYVSRSDW 221
RLLHGR+ F + R+L AY+ DW
Sbjct: 402 RLLHGRSAFEVKSDDLRLLEQAYI---DW 427
>SB_35553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 56.0 bits (129), Expect = 2e-08
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 67 GLQILHCIEHTNGTGGETILVDGFYGATCLKEDHPEDYEFLTTYEIEGEYIERRH----H 122
GL ++HC + G GGE VDGF A LK++ PE++ L T I + H
Sbjct: 189 GLHMIHCRQELGGEGGEHTFVDGFNIAKQLKKEDPENFNRLCTARILYQRKVTNHDADLK 248
Query: 123 FTHSAPVIQIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQWI 182
+ S PVI++D +K+I + R + + L YR+ +R N
Sbjct: 249 MSFSHPVIRLDDKGR-LKRIICSEKYRVSFVNVPPNEVPLLYRAYFQFSRLIRNPGYTIK 307
Query: 183 FKLVPGLVMVIDNFRLLHGRNGF----TGRRVL-CGAYVSRSDWLDKARSL 228
KL G ++ +D R+L GR+ + +G V CG S D AR L
Sbjct: 308 HKLREGDIITMDTDRVLCGRDAYGPEVSGTEVFECG--FSDKDMTSSARRL 356
>SB_13909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 19 VCKALGGIQHTIFGATWEFTTVADHADTAYTNLPLAAHNDNIYWTEAAGLQILHCI 74
V + G + TI+G ++ + + + AY+++ L H D Y+ GLQ+LHC+
Sbjct: 49 VARKFGPVLETIYGRDFQVISQPNPINIAYSDVNLPFHVDLAYYQSPPGLQLLHCV 104
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 34.7 bits (76), Expect = 0.066
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 98 EDHPEDYEFLTTYEIE-GEYIERRHHFTHSAPVIQIDKNTEDIKQIRFNV----YDRSAM 152
+ +P + +TT+ +E E +ER H + S+ Q+ + TE + FN+ DR A
Sbjct: 13 KSNPSEGIKITTHAVEQAEQLERLHRLSESSAASQVPRATEQLPHEMFNIEDEEQDRLAR 72
Query: 153 AFRSGRDCRL--YYRSLKNLARYYEN 176
++R R RL RS ++ +Y++
Sbjct: 73 SYRRQRLLRLRGESRSSQHSVEWYKD 98
>SB_42561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 33.9 bits (74), Expect = 0.11
Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 22/182 (12%)
Query: 56 HNDNIYWTEAAGLQILHCIEHTNGTGGETI--LVDGFYGATCLKEDHPEDYEFL------ 107
H D Y++ A L L E+ N +T+ VD ++++ PE YE L
Sbjct: 218 HMDTSYYSAPARLTGLLATEY-NAPVEDTVNYYVDSLKVIEDIRKEEPEAYELLKSVPAR 276
Query: 108 ------TTYE-IEGEYIERRHHFTH-SAPVIQIDKNTEDIKQIRFNVYDRSAM--AFRSG 157
T E +E E + H T P I D+ ED +RF+ A +
Sbjct: 277 FARRRMTVQEPVEPERVPAFHFETLVKTPFIGYDEG-EDRPMLRFSNKQCGIDPDATKDP 335
Query: 158 RDCRLYYRSLKNLARYYENKENQWIFKLVPGLVMVIDNFRLLHGRNGF--TGRRVLCGAY 215
+ R ++ ++K L + EN L G V +N+R+ HGR+ T RR L ++
Sbjct: 336 QTMRRFFEAVKLLETKLTDPENHQQLVLRQGWCAVFNNWRVCHGRSAVHPTTRRTLMLSF 395
Query: 216 VS 217
+S
Sbjct: 396 IS 397
>SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39)
Length = 407
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 39 TVADHADTAYTNLPLAAHNDNIYWTEAAGLQILHCIEHTNGTGGETILVDGFYGATCLKE 98
T+ DH Y L D +YWT+ I HC + +G GG L G + L
Sbjct: 259 TLIDHTKV-YHPYSLTLFRDRLYWTDWQQHTIEHC-DKLSG-GGRVSLSGGMTRPSALHV 315
Query: 99 DHPE 102
HPE
Sbjct: 316 YHPE 319
>SB_53489| Best HMM Match : Pox_F15 (HMM E-Value=3.2)
Length = 372
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 183 FKLVPGLVMVIDNFRLLHGRNGFTGRR 209
F+ G ++++DN LHGR GF G+R
Sbjct: 337 FQWRQGDMLLVDNLTTLHGRLGFNGKR 363
>SB_53533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 112 IEGEYIERRHHFTH-SAPVIQIDKNTEDIKQIRFNVYDRSAM--AFRSGRDCRLYYRSLK 168
+E E + H T P I D+ ED +RF+ A + + R ++ ++K
Sbjct: 7 VEPERVPAFHFETLVKTPFIGYDEG-EDRPMLRFSNKQCGIDPDATKDPQTMRRFFEAVK 65
Query: 169 NLARYYENKENQWIFKLVPGLVMVIDNFRLLHGRNGF--TGRRVLCGAYVS 217
L + EN L G V +N+R+ HGR+ T RR L +++S
Sbjct: 66 LLETKLTDPENHQQLVLRQGWCAVFNNWRVCHGRSAVHPTTRRTLMLSFIS 116
>SB_53490| Best HMM Match : Orthopox_C1 (HMM E-Value=8.6)
Length = 392
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 190 VMVIDNFRLLHGRNGFTGRR 209
V+++DN LHGR GF G+R
Sbjct: 364 VLLVDNLTTLHGRLGFNGKR 383
>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
Length = 2798
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1496 YCNGTNGERICLDNWYGGNC 1515
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1224 YCNGTNGERICLDDWYGGNC 1243
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1258 YCNGTNGERICLDDWYGGNC 1277
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1292 YCNGTNGERICLDDWYGGNC 1311
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1326 YCNGTNGERICLDDWYGGNC 1345
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1360 YCNGTNGERICLDDWYGGNC 1379
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1394 YCNGTNGERICLDDWYGGNC 1413
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1428 YCNGTNGERICLDDWYGGNC 1447
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1462 YCNGTNGERICLDDWYGGNC 1481
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1530 YCNGTNGERICLDDWYGGNC 1549
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1600 YCNGTNGERICLDDWYGGNC 1619
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1668 YCNGTNGERICLDDWYGGNC 1687
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1702 YCNGTNGERICLDDWYGGNC 1721
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1736 YCNGTNGERICLDDWYGGNC 1755
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1770 YCNGTNGERICLDDWYGGNC 1789
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1804 YCNGTNGERICLDDWYGGNC 1823
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1838 YCNGTNGERICLDDWYGGNC 1857
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 1872 YCNGTNGERICLDDWYGGNC 1891
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 78 NGTGGETILVDGFYGATC 95
NGT GE I +D +YG C
Sbjct: 1636 NGTNGERICLDDWYGGNC 1653
>SB_45060| Best HMM Match : DSL (HMM E-Value=3e-07)
Length = 360
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 6 YCNGTNGERICLDDWYGGNC 25
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 74 YCNGTNGERICLDDWYGGNC 93
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 108 YCNGTNGERICLDDWYGGNC 127
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 142 YCNGTNGERICLDDWYGGNC 161
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 176 YCNGTNGERICLDDWYGGNC 195
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 210 YCNGTNGERICLDDWYGGNC 229
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 244 YCNGTNGERICLDDWYGGNC 263
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 278 YCNGTNGERICLDDWYGGNC 297
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 76 HTNGTGGETILVDGFYGATC 95
+ NGT GE I +D +YG C
Sbjct: 312 YCNGTNGERICLDDWYGGNC 331
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 78 NGTGGETILVDGFYGATC 95
NGT GE I +D +YG C
Sbjct: 42 NGTNGERICLDDWYGGNC 59
>SB_35208| Best HMM Match : EGF_CA (HMM E-Value=1.2e-09)
Length = 598
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 43 HADTAYTNLPLAAHNDNIYWTEAAGLQILHCIEHTN 78
+ ++ YT +P AA + N ++ E+ + +LH + N
Sbjct: 66 YQESIYTTVPQAAQSQNTHYYESIYITVLHVAQRQN 101
>SB_57417| Best HMM Match : Death (HMM E-Value=1.8)
Length = 182
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 49 TNLPLAAHNDNIYWTEAAGLQILHCIE 75
+N+PL H+D + ++AA L+ HC++
Sbjct: 8 SNIPLEIHSDPLKTSQAALLRFRHCLK 34
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 109 TYEIEGEYIERRHHFTHSAPVIQIDKNTEDIKQIRFN 145
T E + E IE+ H H P+++ N ED K+I N
Sbjct: 286 TNEEDKEEIEKNQHRPHHIPIVE-KTNEEDKKEIEKN 321
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,420,004
Number of Sequences: 59808
Number of extensions: 361078
Number of successful extensions: 735
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 674
Number of HSP's gapped (non-prelim): 62
length of query: 232
length of database: 16,821,457
effective HSP length: 80
effective length of query: 152
effective length of database: 12,036,817
effective search space: 1829596184
effective search space used: 1829596184
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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