Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001273-TA|BGIBMGA001273-PA|IPR012776|Trimethyllysine
dioxygenase, IPR003819|Taurine catabolism dioxygenase TauD/TfdA
(232 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z36948-3|CAA85412.1| 421|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC006673-2|AAF39928.1| 300|Caenorhabditis elegans Serpentine re... 31 0.70
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 29 2.8
AF016452-2|AAB66016.2| 476|Caenorhabditis elegans Hypothetical ... 29 3.7
Z68215-15|CAD59144.1| 458|Caenorhabditis elegans Hypothetical p... 28 6.5
Z68160-5|CAA92293.2| 458|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical
protein M05D6.7 protein.
Length = 409
Score = 145 bits (352), Expect = 2e-35
Identities = 81/233 (34%), Positives = 126/233 (54%), Gaps = 18/233 (7%)
Query: 9 VQPSAEATETVCKALGGIQHTIFGATWEFTTVAD-----HADTAYTNLPLAAHNDNIYWT 63
V+ ++EATE +C++L + T FG W F+ A + DTAY + + H D Y+
Sbjct: 167 VEGTSEATEKLCQSLVPVHDTFFGQFWVFSNSATNDEPAYEDTAYGSDEIGPHTDGTYFD 226
Query: 64 EAAGLQILHCIEHTNGTGGETILVDGFYGATCLKEDHPEDYEFLTTYEIEGEYIERR--- 120
+ G+Q+ HC+ TGG+T+LVD FY A L+ + PED+E L +I Y+E
Sbjct: 227 QTPGIQVFHCLTPAK-TGGDTVLVDSFYCAEKLRNESPEDFEILCNTKISHHYLEGSPPG 285
Query: 121 ---HHFTHSAPVIQIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRL-----YYRSLKNLAR 172
H + PVI+ + + +I QIRFN YDR+ + + + +Y + + ++
Sbjct: 286 SSIHSVSLEKPVIERN-SFGNITQIRFNPYDRAPFSCLNSSEASAAETIKFYEAYEKFSK 344
Query: 173 YYENKENQWIFKLVPGLVMVIDNFRLLHGRNGFTGRRVLCGAYVSRSDWLDKA 225
N +N L PG V+ IDNFR+LH R F G R +CG Y+SR +++ KA
Sbjct: 345 ICHNPDNSIEISLRPGSVIFIDNFRILHSRTSFQGYRQMCGCYLSRDNFMAKA 397
>Z36948-3|CAA85412.1| 421|Caenorhabditis elegans Hypothetical
protein D2089.5 protein.
Length = 421
Score = 72.9 bits (171), Expect = 2e-13
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 15 ATETVCKALGGIQHTIFGATWEFTTVADHADTAY-TNLPLAAHNDNIYWTEAAGLQILHC 73
A E + +G I+ T FG +E + AD ++ AY +N L H D + LQ+LH
Sbjct: 180 AVEAIGDRIGMIKRTHFGLVFEVSLKADASNMAYASNGGLPFHTDFPSLSHPPQLQMLHM 239
Query: 74 IEHTNGTGGETILVDGFYGATCLKEDHPEDYEFLTT------------YEIEGEYIERRH 121
++ GG ++ VDGF+ A L+ + PE ++ LTT +EI G+ I +
Sbjct: 240 LQSAE-EGGHSLFVDGFHVAEQLRVEKPEIFKILTTQSMEYIEEGYDVHEINGKTIRFDY 298
Query: 122 HFTHSAPVIQIDKNTEDIKQIRFNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQW 181
VI+++ + + + +I+F RS + YR++K Y N
Sbjct: 299 DMCARHKVIRLNDDGK-VNKIQFGNAMRSWFYDCEPSKVQDVYRAMKTFTEYCYQPRNML 357
Query: 182 IFKLVPGLVMVIDNFRLLHGRNGFTG----RRVLCGAYVSRSDW 221
F+L G ++ N RLLH R+GF R L G Y DW
Sbjct: 358 KFRLEDGDTVLWANQRLLHTRDGFRNAPEKARTLTGCYF---DW 398
>AC006673-2|AAF39928.1| 300|Caenorhabditis elegans Serpentine
receptor, class x protein62 protein.
Length = 300
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 46 TAYTNLPLAAHNDNIYWTEAAGLQILHCIEHTNG-TGGETILVDGFYGATCL 96
T Y LP++ + WT +Q L C H+ G LVDG + T L
Sbjct: 11 TLYALLPISFLGSILNWTIFYAIQRLECFNHSFGFLSANQALVDGLHSTTFL 62
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 100 HPEDYEFLTTYEIEGEYIERRHHFTHSAPVIQIDKNTEDIKQIRFNVYDRSAMAFRSGRD 159
+P D+ + +EGE+ R PV + K+ ED K++R V R F +
Sbjct: 161 NPGDFLLRVSEVVEGEHKVNREVILSLIPVSTVSKDEEDRKKVRNVVIKRVTNLFFC--E 218
Query: 160 CRLYYRSLKNLARYY 174
+ S+ +L YY
Sbjct: 219 ITRTFESISDLVTYY 233
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 94 TCLKEDHPEDYEFLTTYEIEGEYIERRHH 122
T L EDHPE Y T I + R+HH
Sbjct: 370 TSLNEDHPERYVAFNTDTIPMDRYARKHH 398
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 94 TCLKEDHPEDYEFLTTYEIEGEYIERRHH 122
T L EDHPE Y T I + R+HH
Sbjct: 370 TSLNEDHPERYVAFNTDTIPMDRYARKHH 398
>AF016452-2|AAB66016.2| 476|Caenorhabditis elegans Hypothetical
protein T05H4.10 protein.
Length = 476
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 163 YYRSLKNLARYYENKENQWIFKLVPGLVMVIDNFRLLHGRNGFTGRRVLCGAYVSRSDWL 222
+Y+ L + + + N+E +W+ L+ ++ ++++L R G ++L ++ S WL
Sbjct: 286 FYKLLFSSSPEHHNEEREWVLTLISEAMLEPIDYQVLQNRAGI---KLLLSSF--SSVWL 340
Query: 223 D-KARSLNL 230
+ K+RSL L
Sbjct: 341 ERKSRSLIL 349
>Z68215-15|CAD59144.1| 458|Caenorhabditis elegans Hypothetical
protein D1046.5 protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 99 DHPEDYEFLTTYEIE-GEYIERRHHFTHSAPVIQIDKNTED 138
D+ D F T Y+I EY++ H+ T+S P+I T +
Sbjct: 364 DYDRDARF-THYDISRNEYVQNPHYNTYSTPLIMTSVETAE 403
>Z68160-5|CAA92293.2| 458|Caenorhabditis elegans Hypothetical
protein D1046.5 protein.
Length = 458
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 99 DHPEDYEFLTTYEIE-GEYIERRHHFTHSAPVIQIDKNTED 138
D+ D F T Y+I EY++ H+ T+S P+I T +
Sbjct: 364 DYDRDARF-THYDISRNEYVQNPHYNTYSTPLIMTSVETAE 403
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 27.5 bits (58), Expect = 8.7
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 73 CIEHTNGTGGETILVDGFYGATCLKEDH-PEDYEF-LTTYEIEGEYIERRHHFTHSAPVI 130
C+ + N G DGFYG+ C +D ED + + Y G RR F P
Sbjct: 155 CVGNGNRMNGVCQCFDGFYGSECQFQDECKEDDDCGVQGYCRLGGDTPRRQCF---CPTS 211
Query: 131 QIDKNTE-DIKQIR-FNVYDRSAMAFRSGRDCRLYYRSLKNLARYYENKENQ-WI 182
+ K E + IR + +D + R + ++Y+R LK+ + Q WI
Sbjct: 212 RYGKTCELESDSIRSVSDFDETLYQKREDQGNKIYWRLLKDEIEFVLRYPGQSWI 266
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.137 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,176,186
Number of Sequences: 27539
Number of extensions: 266465
Number of successful extensions: 508
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 497
Number of HSP's gapped (non-prelim): 10
length of query: 232
length of database: 12,573,161
effective HSP length: 79
effective length of query: 153
effective length of database: 10,397,580
effective search space: 1590829740
effective search space used: 1590829740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
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