GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001271-TA|BGIBMGA001271-PA|undefined
         (938 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    27   0.79 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   1.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   1.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   5.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   7.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   7.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   7.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   7.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   9.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 228 CFEIGDSVITKTKCSLYHKPEVIE 251
           C E+G SV+ K   +LYH  ++I+
Sbjct: 131 CQELGISVVQKVSHTLYHLQDIID 154


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 444 PQNVPKQDEFDEDEDLLRAKLLTSLS 469
           P+NV K+DE DE++     KL  S S
Sbjct: 77  PENVKKEDESDEEKPTTSFKLKDSSS 102


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/44 (27%), Positives = 24/44 (54%)

Query: 171 NEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVESSNNKIMTYDL 214
           NE+S LS  L   + + V  + +   ++  K +S  + ++TY+L
Sbjct: 343 NEESKLSLDLLSYVPREVYNKEISRLVETLKFQSITSAVVTYEL 386


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 487 KASASNSKINAESIPEEKKFIIKLGESDSEAENEATKN 524
           +    + K ++E++ EEK  +I L ES+ ++    + N
Sbjct: 24  EGDGEDEKRSSENLTEEKSSLIDLTESEEKSGGSYSSN 61


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/45 (24%), Positives = 21/45 (46%)

Query: 831 KSPVNESIPEIVRGRSIEKKDHNINRNDDSTQSSGDCELGGNTVA 875
           ++PV  S   +    S  ++ H+IN  ++  Q    C + G + A
Sbjct: 216 ETPVLASYKSVPMSFSSPRRRHSINLLEEDNQKPNVCRICGKSYA 260


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 80  ISASETEENYCTPQSHFAKEPKQKAKSRRRLKKHKENSSNVLPR 123
           + AS T  N C    H  +  ++  +   R+++H  ++ + +P+
Sbjct: 146 LGASSTPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVPQ 189


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 80  ISASETEENYCTPQSHFAKEPKQKAKSRRRLKKHKENSSNVLPR 123
           + AS T  N C    H  +  ++  +   R+++H  ++ + +P+
Sbjct: 146 LGASSTPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVPQ 189


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 80  ISASETEENYCTPQSHFAKEPKQKAKSRRRLKKHKENSSNVLPR 123
           + AS T  N C    H  +  ++  +   R+++H  ++ + +P+
Sbjct: 146 LGASSTPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHNLSSVPQ 189


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 668 KLSQKYKIAATELRNISTAIYINKKHQRAIQNSLTKIRSDHQLLI 712
           K  ++ + + T  ++ S + ++   H+R I+N+ T   + H +LI
Sbjct: 330 KKKRRNRESTTNTQSSSLSEFLTNTHKRKIENTSTTFNA-HTVLI 373


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.307    0.124    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,018
Number of Sequences: 317
Number of extensions: 7340
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 9
length of query: 938
length of database: 114,650
effective HSP length: 63
effective length of query: 875
effective length of database: 94,679
effective search space: 82844125
effective search space used: 82844125
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 47 (23.0 bits)