GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001271-TA|BGIBMGA001271-PA|undefined
         (938 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    31   0.19 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   3.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   7.0  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   9.3  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   9.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   9.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   9.3  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 30.7 bits (66), Expect = 0.19
 Identities = 26/131 (19%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 589 EYRNLVKRM-AELEKMKESRQSAMNHTNTVLSS-DTLKPKNVPFNAKRIVTISSLEEQIA 646
           E  NL++    +LEK+ E  ++  +   T+    + L        A+R +     E ++ 
Sbjct: 174 ESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLEYVIYETELK 233

Query: 647 NSRKKIAXXXXXXXXXXXXAVKLSQKYKIAATELRNISTAIYINKKHQRAIQNSLTKIRS 706
            +RK++              + L+Q+ + A   L+N   A+   KK     ++  + + +
Sbjct: 234 ETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKKDVVTAKDEKSVLAT 293

Query: 707 DHQLLIKSSSK 717
           +HQ L++  +K
Sbjct: 294 EHQQLLREKTK 304



 Score = 26.6 bits (56), Expect = 3.0
 Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 7/184 (3%)

Query: 248 EVIEASVEDEVSTQDINQNSKSKNNFELSKDRNIDIVDSVDCIRKSFEREEHLQKDSDDD 307
           EV    V DE   + +N   +S+   E   +    I D +  + +  E     QK  D  
Sbjct: 161 EVAGTRVYDERKEESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQK-WDKA 219

Query: 308 LETLRQTALNT--KATKSSRDTSEGPAINE-NKTLSDDEDSDTAELRLICLKSTL--LKK 362
             TL      T  K T+   +  +G   +  +K L   ++   A+ RL   +  L   KK
Sbjct: 220 RRTLEYVIYETELKETRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLKNAQKALKDAKK 279

Query: 363 AIEMXXXXXXXXXXXXXXXXRDEL-IDSLYDDLNNRDSGNNTDKESVDMEIGSDETTESR 421
            +                  R++  +D    DL++   G+N  KE  + E+   + T + 
Sbjct: 280 DVVTAKDEKSVLATEHQQLLREKTKLDLTISDLSDEVQGDNKSKERAEQELERLKITIAE 339

Query: 422 KKTQ 425
           K+ +
Sbjct: 340 KEKE 343


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 35/174 (20%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 143 LESSDESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKV 202
           LES+    +     + KLA   V+ +E  + +++   LK+ L+ ++  +  +    +  V
Sbjct: 299 LESAGRMGELLSELQAKLAWRNVIDQE-EQLAAVDDELKK-LRTSIEEQEHRIRNREALV 356

Query: 203 ESSNNKIMTYDLSSPISPSTEGHVSCFEIGDSVITKTKCSLYHKPEVIEASVEDEVSTQD 262
             +++ I TY   + I    + +V+  E   +V  +T   +  K   IE  + +  +++ 
Sbjct: 357 AKTDSTIDTY--RADIESKKQEYVALKEAYGTV-RRTLQDVQAKQAAIERGMRN--ASER 411

Query: 263 INQNSKSKNNFELS-KDRNIDIVDSVDCIRKSFEREEHLQKDSDDDLETLRQTA 315
           + +  K     E   ++RN D +  V+  +++ E E+   K+ +D+L ++  +A
Sbjct: 412 VTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIASA 465


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.4 bits (53), Expect = 7.0
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 808  STDNLPPISPVKPRSNSPVLLSPKSPVNESIPEIVRGRSIEKKDHNINRNDD-STQSSGD 866
            S+  LPP SP   R   P     ++P  +   + +   + ++    +N+N+  S  +S  
Sbjct: 1131 SSPALPPKSPTSQRITLPGRYEARNPAYQRTTKDLFSGNQQRTQELVNQNETLSCYTSRR 1190

Query: 867  CELGGNTVAEREPKLPRSEKYERLLGEY 894
                 N  +E +   P+  K+ R   +Y
Sbjct: 1191 NSTTSNANSEPQEVAPQFVKFARDSSKY 1218


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 25.0 bits (52), Expect = 9.3
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 147 DESDDEYKFKRRKLADAVVVHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVESSN 206
           DE DDE     + + D     KE  + + +   L +   +A+N       LDD K++ + 
Sbjct: 158 DEIDDENPKFDKNIDD-----KEYVDPTKIKEELAKKKMEAMNEVAADADLDDAKMKKTP 212

Query: 207 NKIMTYDLSSP 217
           + I   D   P
Sbjct: 213 DSIDRVDHEQP 223


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 9.3
 Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 12/162 (7%)

Query: 166 VHKETNEKSSLSSRLKEMLQKAVNREPLKTSLDDKKVESSNNKI----MTYDLSSPISPS 221
           +H +    +    RLKE +     R   +T  D +KV +   K+      +D SS  + +
Sbjct: 817 MHMDVASLTQQMPRLKEQVDWQAERVA-RTHSDPEKVRALEAKVAECKQAFDSSSTKADA 875

Query: 222 TEGHVSCFEIGDSVITKTKCS-LYHKPEVIEASVED-EVSTQDINQNSK-SKNNFELSKD 278
            + +V  +    + IT +K   L  K   +   ++    +   +    K S+ N + SKD
Sbjct: 876 MQKNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKD 935

Query: 279 RNIDIVDSVD----CIRKSFEREEHLQKDSDDDLETLRQTAL 316
           +   + D V+     IRK  +    L+++++   E L +  L
Sbjct: 936 KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKL 977


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 9.3
 Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 468 LSKNLPNLVDAELINDSNGKASASNSKINAESIPEEKKFIIKLGESDSEAENEATKNLTK 527
           + K +  L + E+   +     A  SK    ++  E+  + +      +A+  ++K L  
Sbjct: 343 IKKLVDELQEVEVKRAAFENEVAGESKKRGSNVHLERDLVQEYDRLKQKADATSSKYLIH 402

Query: 528 MHMKLSEDVCFATKLDNLLKSTRMQVEKN-KHSETETNSPVTKKPEKFV 575
           +     E      +LD+ +   + Q+E+N K  E+E N  + K+ EK +
Sbjct: 403 LDSVNREQKSDQDRLDSEINK-KAQIEENYKKIESEKNEAL-KRQEKLI 449


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.0 bits (52), Expect = 9.3
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 481  INDSNGKASASNSKINAESIPEEKKFIIKLGESDSEAENEATKNLT 526
            ++   G +  S   + + +   E+K    L E D+E+EN +   LT
Sbjct: 1315 LSSMGGHSQTSAQSLQSIAGQTERKISFVLQEPDNESENSSNTTLT 1360


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.307    0.124    0.331 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,166
Number of Sequences: 2123
Number of extensions: 29296
Number of successful extensions: 53
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 14
length of query: 938
length of database: 516,269
effective HSP length: 70
effective length of query: 868
effective length of database: 367,659
effective search space: 319128012
effective search space used: 319128012
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 52 (25.0 bits)