Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001270-TA|BGIBMGA001270-PA|undefined
(381 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0065 - 40851101-40851247,40851352-40851495,40851781-408518... 107 2e-23
02_04_0050 - 19245087-19245113,19245306-19245449,19245546-192456... 98 9e-21
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 92 6e-19
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319... 92 6e-19
11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489,775... 77 3e-14
04_03_0825 - 20092781-20092801,20092844-20093079,20093166-200932... 55 1e-07
06_03_1318 - 29282562-29282566,29282727-29282810,29282913-292833... 30 2.7
11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 30 3.5
06_01_0558 - 3968211-3969475,3970198-3970266,3970374-3970529,397... 29 4.7
01_06_0748 - 31652779-31653048 29 4.7
07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856 29 6.2
05_03_0289 - 11688733-11691342 29 6.2
>01_07_0065 -
40851101-40851247,40851352-40851495,40851781-40851872,
40851954-40852035,40852127-40852193,40852284-40852375,
40852470-40852586,40852764-40852881,40852969-40853161,
40853258-40853339,40853607-40853744,40853829-40854023
Length = 488
Score = 107 bits (256), Expect = 2e-23
Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 62/374 (16%)
Query: 1 MAIVFMIFVNDGAGGYW-WMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIP- 58
+ + MI V DGAGG W + HA WNG D V P FL+I+G+ IPLS K IP
Sbjct: 62 LTVALMILV-DGAGGEWPVIGHAPWNGCNLADFVMPFFLFIVGMAIPLS-----LKRIPD 115
Query: 59 RWKIVMHIVRRSIMMFFLGMSL---------NTIYGSNVLQELRIFGVLQRLAVAYLVAA 109
R + V +V R++ + F G+ L + YG + ++ +R G+LQR+A+AYLV A
Sbjct: 116 RGRAVRRVVLRTLKLLFWGILLQGGYSHAPDDLSYGVD-MKHVRWCGILQRIALAYLVVA 174
Query: 110 GFYALTAPKFYTPPRGACGQALKDVLSCLW---CWVLAIVLVTVHSVIT----FIIHHPD 162
+T + + G ++ + W C +L I L V+ + F +
Sbjct: 175 VLEIVT-KNAKVQDQSSSGFSIFRMYFSQWIVACCILVIYLSLVYGIYVPDWDFRVSDVK 233
Query: 163 CPP-GYL-----GPGGKHDEWVAPECSGGAAGFIDRLILGESHLYQRSDAR--------N 208
P G + G GK ++P C+ A G+IDR +LG +H+Y R R +
Sbjct: 234 NPNFGKILTVTCGTRGK----LSPPCN--AVGYIDRKVLGINHMYHRPAWRRHKDCTDDS 287
Query: 209 VYGGP-----------PTDPEGLLGCVTSAVQALIGIQAGATVLLQRSHKARVSRXXXXX 257
+ GP P +PEGLL +++ + +IG+ G ++ +SH R+ +
Sbjct: 288 PHEGPFKTDSPAWCYAPFEPEGLLSSLSAVLSTIIGVHYGHVLVHMKSHTDRLKQWSIMG 347
Query: 258 XXXXXXXXXXXXXSREHGVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRI-WNGG 316
IP+NK L++ S++ VT+ ++ Y L D + +
Sbjct: 348 ITLLILGLTLHFSH----AIPLNKQLYTFSYICVTAGAAGIVFCMFYFLVDILNLHYPFA 403
Query: 317 PFRSPGLNAIALYV 330
P + G+NA+ +YV
Sbjct: 404 PLKWTGMNAMLVYV 417
>02_04_0050 -
19245087-19245113,19245306-19245449,19245546-19245637,
19245733-19245811,19245902-19245968,19246084-19246175,
19246267-19246383,19246472-19246583,19246884-19246990,
19247113-19247189,19247351-19247432,19247526-19247663,
19248176-19248234,19249155-19249233
Length = 423
Score = 98.3 bits (234), Expect = 9e-21
Identities = 103/381 (27%), Positives = 164/381 (43%), Gaps = 57/381 (14%)
Query: 6 MIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIPRWKIVMH 65
MI V+D + H+ W+G+ D V P FL+++G+ + L A+ + + +
Sbjct: 48 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTL----AYKRVPDKLEATKK 103
Query: 66 IVRRSIMMFFLGMSLNTIYGSNV--------LQELRIFGVLQRLAVAYLVAAGFYALTAP 117
V R++ +F LG+ L + V + ++R+ G+LQR+A+AYL+AA +
Sbjct: 104 AVLRALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAA----ICEI 159
Query: 118 KFYTPPRGACGQALKDVLSCLWCWVLAIVLVTVHSVITFIIHHPDCPPGYLGPGGKHDEW 177
CG L + + V+A++L T+++VI ++ PD GPG +
Sbjct: 160 WLKGDDDVDCG--LDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTEKSF 217
Query: 178 ---------VAPECSGGAAGFIDRLILGESHLYQR--------SDARNVYGGP------- 213
P C+ A G +DR ILG HLY+R GP
Sbjct: 218 SVRCGVRGDTGPACN--AVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPS 275
Query: 214 ----PTDPEGLLGCVTSAVQALIGIQAGATVLLQRSHKARVSRXXXXXXXXXXXXXXXXX 269
P DPEGLL V + V LIG+Q G ++ HK R+
Sbjct: 276 WCQAPFDPEGLLSSVMAIVTCLIGLQFGHIIIHFEKHKGRI-----INWLIPSFSMLALA 330
Query: 270 XSREHGVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRIWN-GGPFRSPGLNAIAL 328
S + I +NK L++ S+ L TS LL + YTL D + P G +A+ +
Sbjct: 331 FSMDFIGIRMNKPLYTISYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMI 390
Query: 329 YV---GHSLCAHLFPFHWKIP 346
YV + L + F+W+ P
Sbjct: 391 YVLVACNILPIFIHGFYWREP 411
>11_06_0013 -
19252779-19252805,19252947-19253090,19253572-19253663,
19253757-19253835,19253965-19254031,19254163-19254254,
19254986-19255102,19255254-19255365,19255479-19255594,
19255680-19255756,19255912-19255993,19256077-19256214,
19258806-19259009
Length = 448
Score = 92.3 bits (219), Expect = 6e-19
Identities = 103/387 (26%), Positives = 163/387 (42%), Gaps = 54/387 (13%)
Query: 1 MAIVFMIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIPRW 60
+ + MI V+D G + H+ W+G+ D VFP FL+I+GV + + K K +
Sbjct: 65 ITVALMILVDDVGGIVPAISHSPWDGVTLADFVFPFFLFIVGVSLAFAYKKVPDKMLATK 124
Query: 61 KIVMHIVRRSIM------MFFLGMSLNTIYGSNVLQELRIFGVLQRLAVAYLVAAGFYAL 114
K ++ V+ I+ FF G+ T YG ++ +++R+ GVLQR+A+AYLV A +
Sbjct: 125 KAMLRAVKLFIVGLILQGGFFHGIHELT-YGVDI-RKIRLMGVLQRIAIAYLVVA-LCEI 181
Query: 115 TAPKFYTPPRGACGQALKDVLSCLWCWVLAIVLVTVHSVITFIIHHPDCPPGYLGPGG-- 172
+ G G + + +VLV + VI + +H PD P
Sbjct: 182 WLRR--VSSGGNIGSGSMLITRYHHQMFVGLVLVVTYLVILYGLHVPDWEYEVTSPDSTV 239
Query: 173 KH-------DEWVAPECSGGAAGFIDRLILGESHLY--------QRSDARNVYGGP---- 213
KH P C+ A G IDR +LG HLY ++ + GP
Sbjct: 240 KHFLVKCGVKGDTGPGCN--AVGMIDRSVLGIQHLYAHPVYLKTEQCSMASPRNGPLPPN 297
Query: 214 -------PTDPEGLLGCVTSAVQALIGIQAGATVLLQRSHKARVSRXXXXXXXXXXXXXX 266
P DPEGLL + + V LIG+Q G ++ + H R+ R
Sbjct: 298 APSWCEAPFDPEGLLSSLMAIVTCLIGLQIGHVIVHFKKHNERIKRWSILSLCLLTLGFS 357
Query: 267 XXXXSREHGVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRIWNGG-PFRSPGLNA 325
+ +NK+L+S S+ VT+ L Y L D P G +A
Sbjct: 358 LHLFG-----LHMNKSLYSLSYTCVTTGTAGLFFVAIYLLVDVKGYKRPVLPMEWMGKHA 412
Query: 326 IALYVGHSLCAHLFP-----FHWKIPN 347
+ ++V + ++ P F+WK P+
Sbjct: 413 LMIFV--LVACNVIPVLVQGFYWKEPS 437
>05_01_0406 +
3197189-3197389,3197491-3197628,3198463-3198544,
3198658-3198734,3198829-3198935,3199367-3199505,
3200602-3200718,3200850-3200941,3201096-3201162,
3201249-3201355,3201468-3201546,3201751-3201894,
3202095-3202235
Length = 496
Score = 92.3 bits (219), Expect = 6e-19
Identities = 107/428 (25%), Positives = 179/428 (41%), Gaps = 73/428 (17%)
Query: 1 MAIVFMIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIPRW 60
+ + MI V+D G + M H+ W G+ D V PAFL+I+GV L K K +
Sbjct: 64 LTVAMMILVDDAGGAWPGMNHSPWLGVTVADFVMPAFLFIIGVSAALVFKKTPNKTVATK 123
Query: 61 KIVMHIVRRSIMMFFLGMSL---------NTIYGSNVLQELRIFGVLQRLAVAYLVAAGF 111
K + R+I +F LG+ L N YG + L +R GVLQR+A+ G+
Sbjct: 124 KAAI----RAIKLFILGVILQGGYIHGRHNLTYGID-LDHIRWLGVLQRIAI------GY 172
Query: 112 YALTAPKFYTPPRGACGQALKDVLSCLWCWVLAIVLV--------------------TVH 151
+ + + + A+ V W++A+++ T +
Sbjct: 173 FLAAISEIWLVNNISVDSAISFVKKYFMEWIVAVMISALYVGLLLGLYVSNWEFKVQTSN 232
Query: 152 SVITFIIHHPDCPPGYLGPGGKHDEWVAPECSGGAAGFIDRLILGESHL-----YQRSDA 206
S++T + + G + + P C+ A GF+DR++LGE+HL Y+R+
Sbjct: 233 SILTIPTPGNEIGMKMIQCGVRGS--LGPPCN--AVGFVDRVLLGENHLYKNPVYKRTKE 288
Query: 207 RNVYG---GP-----------PTDPEGLLGCVTSAVQALIGIQAGATVLLQRSHKARVSR 252
+V GP P DPEGLL + +AV +G+ G ++ ++ S
Sbjct: 289 CSVNSPDYGPLPPNAPDWCLAPFDPEGLLSTLMAAVTCFVGLHFGHVLVHCKTSLTFAST 348
Query: 253 XXXXXXXXXXXXXXXXXXSREHGVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRI 312
S I+K L++ S++L+T LL Y + D I
Sbjct: 349 TGSFTSNAIMATSFHCVNSLRISTSVISKPLYTVSYMLLTGGVSGFLLLLLYYIVDVINI 408
Query: 313 WNGG-PFRSPGLNAIALYVGHSLCAHLFP-----FHWKIP--NMETHTIKLLEAVWGTAL 364
F+ G+NA+ +YV +FP F+W+ P N+ T LL+ ++ +
Sbjct: 409 KKPFILFQWMGMNALIVYV--LAACEIFPTLVQGFYWRSPENNLVDLTESLLQTIFHSKR 466
Query: 365 WVIIAHVM 372
W +A V+
Sbjct: 467 WGTLAFVV 474
>11_02_0049 -
7751779-7751925,7752046-7752189,7752398-7752489,
7752745-7752811,7753148-7753264,7753318-7753462,
7753574-7753689,7753789-7753865,7753995-7754076,
7754180-7754317,7754781-7754999
Length = 447
Score = 76.6 bits (180), Expect = 3e-14
Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 1 MAIVFMIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFA-KGIPR 59
+ IV MI V+D G Y M+H+ WNG D V P FL+I+GV I AFA K +P+
Sbjct: 70 LTIVLMILVDDAGGAYERMDHSPWNGCTLADFVMPFFLFIVGVAI------AFALKRVPK 123
Query: 60 -WKIVMHIVRRSIMMFFLGMSL---------NTIYGSNVLQELRIFGVLQRLAVAYLVAA 109
V I R++ M F G+ L + YG + ++++R G+LQR+A+ Y V A
Sbjct: 124 LGAAVKKITIRTLKMLFWGLLLQGGYSHAPDDLSYGVD-MKKIRWCGILQRIALVYFVVA 182
Query: 110 GFYALTAPKFYTPPRGACGQALKDVLSCLWCWVLAIVLVTVHSVITFIIHHPDCPPGYLG 169
A T T R + W W+ V + ++ V TF ++ PD Y
Sbjct: 183 LIEAFTTKVRPTTVRSGPYAIFH---AYRWQWLGGFVALFIYMVTTFSLYVPDWSYVYHN 239
Query: 170 PGGKHDE-------WVAP---EC--------SGGAAGFIDRLILGESHLY 201
G +D V P +C + A G++DR++ G +HLY
Sbjct: 240 DGDVNDGKQFTVLLAVFPDHVQCGVRGHLDPACNAVGYVDRVVWGINHLY 289
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 271 SREHGVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRIWNGGPFRS-PGLNAIALY 329
SR IPINK L+S S+V T+ ++LS Y L D W + F G+NA+ ++
Sbjct: 316 SRSFQAIPINKQLYSLSYVCFTAGAAGVVLSAFYILIDVWGLRTPFLFLEWIGMNAMLVF 375
Query: 330 V 330
V
Sbjct: 376 V 376
>04_03_0825 -
20092781-20092801,20092844-20093079,20093166-20093244,
20093344-20093482,20093533-20093624,20093714-20093830,
20093930-20094041,20094154-20094260,20094351-20094427,
20094517-20094598,20094702-20094839,20095495-20095608
Length = 437
Score = 54.8 bits (126), Expect = 1e-07
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 6 MIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIPRWKIVMH 65
MI V+D + H+ W+G+ D V P FL+I+GV + L A+ + + +
Sbjct: 40 MILVDDAGAFLPAINHSPWDGVTLADFVMPFFLFIVGVALAL----AYKRVPNKLEATRK 95
Query: 66 IVRRSIMMFFLGMSLNTIYGSNV--------LQELRIFGVLQRLAVAYLVAA 109
+ R++ +F +G+ L + V ++++R+ G+LQR+A+AY+V A
Sbjct: 96 AILRALKLFCVGLVLQGGFFHGVRSLTFGIDMEKIRLMGILQRIAIAYIVTA 147
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 221 LGCVTSAVQALIGIQAGATVLLQRSHKARVSRXXXXXXXXXXXXXXXXXXSREHGVIPIN 280
+ V + V LIG+Q G ++ + HK R+ + S + + +N
Sbjct: 303 ISSVMAIVTCLIGLQYGHVIVHFQKHKERIMKWLIPSFSMLILAF-----SLDFFGMHMN 357
Query: 281 KNLWSTSFVLVTSACCLLLLSFCYTLTDAW 310
K L++ S+ L T+ LL + Y L D +
Sbjct: 358 KPLYTVSYALATAGAAGLLFAGIYALVDMY 387
>06_03_1318 - 29282562-29282566,29282727-29282810,29282913-29283380,
29283735-29283917,29284362-29284467,29284627-29284651,
29284736-29284855,29284920-29284997,29285646-29285774,
29285976-29285989,29286168-29287944,29288344-29288489,
29288921-29291029
Length = 1747
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 182 CSGGAAGFIDRLILGESHLYQRSDARNVYGGPPTDPEGLLGCVTSAVQALIGIQAGATVL 241
C+G ++G +DR + +Y D + ++ D LL V +A L G++ G T+
Sbjct: 1585 CNGNSSGIVDRTQSSDQLIYAGKDIQGLHSS--MDASNLLP-VQNANSVLFGVENGTTIK 1641
Query: 242 LQRSHKA 248
+ + +
Sbjct: 1642 TESGYSS 1648
>11_06_0349 + 22565405-22566279,22567774-22569772,22570360-22570478,
22570835-22571117
Length = 1091
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/52 (25%), Positives = 21/52 (40%)
Query: 275 GVIPINKNLWSTSFVLVTSACCLLLLSFCYTLTDAWRIWNGGPFRSPGLNAI 326
GVI + +W V ++ + C + D WR+W + GL I
Sbjct: 1033 GVILVTWLIWKEQNARVFEGKATMVFALCVVIIDEWRMWKVAALFTLGLGCI 1084
>06_01_0558 -
3968211-3969475,3970198-3970266,3970374-3970529,
3971075-3971405
Length = 606
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 137 CLWCWVLAIVLVTVHSVITFIIHH-PDCPPGYLGPGGKHDEWVAPEC 182
C+WC ++ + LV S + H D +L P G +W + +C
Sbjct: 5 CIWCCLVLLTLVVCDSCLHEERKHLMDICDAFLWPAGNPPDWSSRDC 51
>01_06_0748 - 31652779-31653048
Length = 89
Score = 29.5 bits (63), Expect = 4.7
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 134 VLSCLWCWVLAIVLVTVHSVITFIIHHPDCPPGYLGP-GGKHDEWVAPECSGGAAGFIDR 192
+ SC+ C VL +VLV V + Y P GG +D+ VA GG G R
Sbjct: 3 IRSCV-CIVLCLVLVVVVGLAATQAEAARALAEYAAPPGGDYDDDVAGGGGGGGFGIRGR 61
Query: 193 LILGESHLYQ-RSDARNVYGGPPTDPE 218
G ++ + R V GGP DP+
Sbjct: 62 RRPGRWNVRSLQGGKREVPGGP--DPQ 86
>07_03_1154 - 24402550-24405073,24405909-24406330,24407318-24408856
Length = 1494
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 292 TSACC-LLLLSFCYT--LTDAWRIWNG 315
T CC LL++ +C L+DA R+WNG
Sbjct: 220 TGRCCELLVVGYCRAGMLSDACRVWNG 246
>05_03_0289 - 11688733-11691342
Length = 869
Score = 29.1 bits (62), Expect = 6.2
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 170 PGGKHDE--WVA--PECSGGAAGFIDRLILGESHLYQRSDARNVYGGPPTDPEGLLGCVT 225
PGG D+ WV P G+ F D L+ G +++ SD+ GP DP LL
Sbjct: 368 PGGAGDKVLWVQLMPNVGSGSE-FFDSLLNG-LEIFKMSDSSGNLAGPNPDPSKLLEEAE 425
Query: 226 SAVQ 229
S+ Q
Sbjct: 426 SSAQ 429
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.328 0.141 0.479
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,357,842
Number of Sequences: 37544
Number of extensions: 539354
Number of successful extensions: 1460
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1427
Number of HSP's gapped (non-prelim): 24
length of query: 381
length of database: 14,793,348
effective HSP length: 83
effective length of query: 298
effective length of database: 11,677,196
effective search space: 3479804408
effective search space used: 3479804408
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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