Silkworm BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001270-TA|BGIBMGA001270-PA|undefined
         (381 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122161-1|AAM52673.1|  576|Drosophila melanogaster LD22376p pro...   350   2e-96
AE014298-692|AAF45996.1|  576|Drosophila melanogaster CG6903-PA ...   350   2e-96

>AY122161-1|AAM52673.1|  576|Drosophila melanogaster LD22376p
           protein.
          Length = 576

 Score =  350 bits (860), Expect = 2e-96
 Identities = 176/374 (47%), Positives = 234/374 (62%), Gaps = 9/374 (2%)

Query: 1   MAIVFMIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIPRW 60
           ++IV MIFVN G GGY W+EHA WNG+   D+VFP+FLWIMGVCIPLS KS  ++G  + 
Sbjct: 195 ISIVLMIFVNSGGGGYAWIEHAAWNGLHLADVVFPSFLWIMGVCIPLSVKSQLSRGSSKA 254

Query: 61  KIVMHIVRRSIMMFFLGMSLNTIYGSNVLQELRIFGVLQRLAVAYLVAAGFYALTAPKFY 120
           +I + I+ RSI +F +G+ LN++ G N L++LRI GVLQR  VAYLV A  + L   +  
Sbjct: 255 RICLRILWRSIKLFVIGLCLNSMSGPN-LEQLRIMGVLQRFGVAYLVVAILHTLCCRREP 313

Query: 121 TPPRGACGQALKDVLSCLWCWVLAIVLVTVHSVI--TFIIHHPDCPPGYLGPGGKHDEWV 178
             P+ +  +A+ DV  CL+   LA++L  V + +  TF +  P CP GYLGPGGKHD   
Sbjct: 314 ISPQRSWQRAVHDV--CLFSGELAVLLALVATYLGLTFGLRVPGCPRGYLGPGGKHDYNA 371

Query: 179 APECSGGAAGFIDRLILGESHLYQRSDARNVYGGPPTDPEGLLGCVTSAVQALIGIQAGA 238
            P+C GGAAG+ D  +LG +H+YQ   A+ VY     DPEG+ GC+ S VQ L+G  AG 
Sbjct: 372 HPKCIGGAAGYADLQVLGNAHIYQHPTAKYVYDSTAFDPEGIFGCILSVVQVLLGAFAGV 431

Query: 239 TVLLQRSHKARVSRXXXXXXXXXXXXXXXXXXSREHGVIPINKNLWSTSFVLVTSACCLL 298
           T+L+  + ++R+ R                  SRE G IP+NKNLWS SFV VT +  LL
Sbjct: 432 TLLVHPNFQSRIRRWTLLAILLGLIGGALCGFSREGGAIPMNKNLWSLSFVCVTVSLALL 491

Query: 299 LLSFCYTLTD---AWRIWNGGPFRSPGLNAIALYVGHSLCAHLFPFHWKIPNMETHTIKL 355
           +LS  Y   D    W  W+G PF   G+NAI +YVGHS+   + P+HW+I  M TH + L
Sbjct: 492 ILSLMYYFIDVRETWS-WSGYPFTECGMNAIVMYVGHSVLHKMLPWHWRIGEMNTHFMLL 550

Query: 356 LEAVWGTALWVIIA 369
           LEA W T +WV IA
Sbjct: 551 LEATWNTLVWVGIA 564


>AE014298-692|AAF45996.1|  576|Drosophila melanogaster CG6903-PA
           protein.
          Length = 576

 Score =  350 bits (860), Expect = 2e-96
 Identities = 176/374 (47%), Positives = 234/374 (62%), Gaps = 9/374 (2%)

Query: 1   MAIVFMIFVNDGAGGYWWMEHATWNGMVAGDLVFPAFLWIMGVCIPLSGKSAFAKGIPRW 60
           ++IV MIFVN G GGY W+EHA WNG+   D+VFP+FLWIMGVCIPLS KS  ++G  + 
Sbjct: 195 ISIVLMIFVNSGGGGYAWIEHAAWNGLHLADVVFPSFLWIMGVCIPLSVKSQLSRGSSKA 254

Query: 61  KIVMHIVRRSIMMFFLGMSLNTIYGSNVLQELRIFGVLQRLAVAYLVAAGFYALTAPKFY 120
           +I + I+ RSI +F +G+ LN++ G N L++LRI GVLQR  VAYLV A  + L   +  
Sbjct: 255 RICLRILWRSIKLFVIGLCLNSMSGPN-LEQLRIMGVLQRFGVAYLVVAILHTLCCRREP 313

Query: 121 TPPRGACGQALKDVLSCLWCWVLAIVLVTVHSVI--TFIIHHPDCPPGYLGPGGKHDEWV 178
             P+ +  +A+ DV  CL+   LA++L  V + +  TF +  P CP GYLGPGGKHD   
Sbjct: 314 ISPQRSWQRAVHDV--CLFSGELAVLLALVATYLGLTFGLRVPGCPRGYLGPGGKHDYNA 371

Query: 179 APECSGGAAGFIDRLILGESHLYQRSDARNVYGGPPTDPEGLLGCVTSAVQALIGIQAGA 238
            P+C GGAAG+ D  +LG +H+YQ   A+ VY     DPEG+ GC+ S VQ L+G  AG 
Sbjct: 372 HPKCIGGAAGYADLQVLGNAHIYQHPTAKYVYDSTAFDPEGIFGCILSVVQVLLGAFAGV 431

Query: 239 TVLLQRSHKARVSRXXXXXXXXXXXXXXXXXXSREHGVIPINKNLWSTSFVLVTSACCLL 298
           T+L+  + ++R+ R                  SRE G IP+NKNLWS SFV VT +  LL
Sbjct: 432 TLLVHPNFQSRIRRWTLLAILLGLIGGALCGFSREGGAIPMNKNLWSLSFVCVTVSLALL 491

Query: 299 LLSFCYTLTD---AWRIWNGGPFRSPGLNAIALYVGHSLCAHLFPFHWKIPNMETHTIKL 355
           +LS  Y   D    W  W+G PF   G+NAI +YVGHS+   + P+HW+I  M TH + L
Sbjct: 492 ILSLMYYFIDVRETWS-WSGYPFTECGMNAIVMYVGHSVLHKMLPWHWRIGEMNTHFMLL 550

Query: 356 LEAVWGTALWVIIA 369
           LEA W T +WV IA
Sbjct: 551 LEATWNTLVWVGIA 564


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.141    0.479 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,021,410
Number of Sequences: 52641
Number of extensions: 793250
Number of successful extensions: 1503
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1493
Number of HSP's gapped (non-prelim): 2
length of query: 381
length of database: 24,830,863
effective HSP length: 86
effective length of query: 295
effective length of database: 20,303,737
effective search space: 5989602415
effective search space used: 5989602415
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 63 (29.5 bits)