GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001270-TA|BGIBMGA001270-PA|undefined
         (381 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    30   0.12 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   4.6  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   6.1  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   8.0  

>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 29.9 bits (64), Expect = 0.12
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)

Query: 163 CPPG---YLGPGGKHDEWVAPECSGGAAGFID-RLILGESH 199
           CP G   Y+ P GKH E V  +C+ G   F++   +L + H
Sbjct: 111 CPSGKIIYIEPKGKHPECVPNQCADGKVRFMNVCAVLNQEH 151


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query: 280 NKNLWSTSFVLVTSACC 296
           NK++W+T FVL+T   C
Sbjct: 551 NKHVWNTWFVLLTIIFC 567


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 180 PECSGGAAGFIDRLILGESHLYQRSDARNVYGGPPTDP 217
           P C G  A F+     GE+H   ++  R     P T P
Sbjct: 293 PYCEGREASFVHNCFEGETHPTTQNKPRPGIVAPTTIP 330


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 62  IVMHIVRRSIMMFFLGMSL-NTIYGSNVLQELRIFGVLQR 100
           IV  +  +S+ + F  M + N+I   NVLQ+L ++ + +R
Sbjct: 211 IVTKMKMKSVTVMFPKMHISNSISLKNVLQQLGVYTLFER 250


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.141    0.479 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,875
Number of Sequences: 2123
Number of extensions: 17122
Number of successful extensions: 49
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 4
length of query: 381
length of database: 516,269
effective HSP length: 65
effective length of query: 316
effective length of database: 378,274
effective search space: 119534584
effective search space used: 119534584
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 49 (23.8 bits)