Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001269-TA|BGIBMGA001269-PA|IPR000008|C2
calcium-dependent membrane targeting, IPR008973|C2
calcium/lipid-binding region, CaLB, IPR001683|Phox-like
(207 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase... 46 2e-05
At5g04220.2 68418.m00411 C2 domain-containing protein (sytC) GC ... 45 3e-05
At5g04220.1 68418.m00410 C2 domain-containing protein (sytC) GC ... 45 3e-05
At1g05500.1 68414.m00561 C2 domain-containing protein similar to... 44 6e-05
At5g11100.1 68418.m01296 C2 domain-containing protein similar to... 41 5e-04
At1g22610.1 68414.m02823 C2 domain-containing protein contains I... 40 0.001
At3g55940.1 68416.m06216 phosphoinositide-specific phospholipase... 39 0.003
At3g08510.1 68416.m00988 phosphoinositide-specific phospholipase... 38 0.005
At1g20080.1 68414.m02513 C2 domain-containing protein contains I... 38 0.006
At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase... 36 0.015
At2g20990.1 68415.m02485 C2 domain-containing protein (sytA) sim... 33 0.10
At2g21010.1 68415.m02489 C2 domain-containing protein contains I... 33 0.14
At5g58700.1 68418.m07354 phosphoinositide-specific phospholipase... 31 0.56
At5g17980.1 68418.m02109 C2 domain-containing protein contains I... 31 0.74
At1g74720.1 68414.m08658 C2 domain-containing protein contains I... 30 0.98
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 29 1.7
At5g58690.1 68418.m07353 phosphoinositide-specific phospholipase... 29 2.3
At2g21040.1 68415.m02495 C2 domain-containing protein low simila... 29 2.3
At2g02030.1 68415.m00138 F-box family protein contains F-box dom... 29 3.0
At1g73580.1 68414.m08518 C2 domain-containing protein similar to... 29 3.0
At3g07940.1 68416.m00971 zinc finger and C2 domain protein, puta... 28 5.2
At1g76960.1 68414.m08960 expressed protein 28 5.2
At3g61300.1 68416.m06860 C2 domain-containing protein anthranila... 27 9.1
At1g25320.1 68414.m03142 leucine-rich repeat transmembrane prote... 27 9.1
>At2g40116.1 68415.m04933 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 613
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 113 APPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWHYD 172
+PP+ Y K+++V P K+KT++++ N +P + E E+ P+ + L+ V YD
Sbjct: 509 SPPDFYTKMFIVGVPADNAKKKTKIIEDNWYPIWDE--EFSFPLTVPELALLRIEVREYD 566
Query: 173 SLQENQFLGGVVIPLSSL 190
+++ F G +P++ L
Sbjct: 567 MSEKDDFGGQTCLPVAEL 584
>At5g04220.2 68418.m00411 C2 domain-containing protein (sytC) GC
donor splice site at exon 3; similar to Ca2+-dependent
lipid-binding protein (CLB1) GI:2789434 from
[Lycopersicon esculentum]
Length = 540
Score = 45.2 bits (102), Expect = 3e-05
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 88 SVQYAGGVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFM 147
SV+ G+L V IL A++L +PYVK+ L + K +KT + KRN +P +
Sbjct: 255 SVKKPVGLLHVSILRARNLLKKDLLGTSDPYVKLSLTGE--KLPAKKTTIKKRNLNPEWN 312
Query: 148 EMLEYRLPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSL 190
E ++L ++ ++ LQ V+ +D + + LG +IPL +
Sbjct: 313 E--HFKLIVKDPNSQVLQLEVFDWDKVGGHDRLGMQMIPLQKI 353
>At5g04220.1 68418.m00410 C2 domain-containing protein (sytC) GC
donor splice site at exon 3; similar to Ca2+-dependent
lipid-binding protein (CLB1) GI:2789434 from
[Lycopersicon esculentum]
Length = 318
Score = 45.2 bits (102), Expect = 3e-05
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 88 SVQYAGGVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFM 147
SV+ G+L V IL A++L +PYVK+ L + K +KT + KRN +P +
Sbjct: 33 SVKKPVGLLHVSILRARNLLKKDLLGTSDPYVKLSLTGE--KLPAKKTTIKKRNLNPEWN 90
Query: 148 EMLEYRLPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSL 190
E ++L ++ ++ LQ V+ +D + + LG +IPL +
Sbjct: 91 E--HFKLIVKDPNSQVLQLEVFDWDKVGGHDRLGMQMIPLQKI 131
>At1g05500.1 68414.m00561 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 528
Score = 44.4 bits (100), Expect = 6e-05
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 94 GVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYR 153
GVLSV ++ A+ + + +PYV + + K KTRV+ + +P + + ++
Sbjct: 403 GVLSVTVISAEEIPIQDLMGKADPYVVLSMKKSGAKS---KTRVVNDSLNPVWNQTFDF- 458
Query: 154 LPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSLPLRQETVAWYPLE 203
+E + L VW +D+ ++ ++G ++ L+ + + +E WYPL+
Sbjct: 459 -VVEDGLHDMLVLEVWDHDTFGKD-YIGRCILTLTRVIMEEEYKDWYPLD 506
Score = 33.5 bits (73), Expect = 0.10
Identities = 21/109 (19%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 94 GVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYR 153
G+L V ++ A++L +P+ K+++ P +E ++++ + + +P + E E+
Sbjct: 230 GMLEVKLVQAKNLTNKDLVGKSDPFAKMFI--RPLREKTKRSKTINNDLNPIWNEHFEF- 286
Query: 154 LPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSLPLRQETVAWYPL 202
+E + L ++ + +Q ++ +G I L L + W L
Sbjct: 287 -VVEDASTQHLVVRIYDDEGVQASELIGCAQIRLCELEPGKVKDVWLKL 334
>At5g11100.1 68418.m01296 C2 domain-containing protein similar to
Ca2+-dependent lipid-binding protein (CLB1) GI:2789434
from [Lycopersicon esculentum]
Length = 574
Score = 41.1 bits (92), Expect = 5e-04
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 94 GVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYR 153
GVLSV ++ A+ L + +V + L ETK KTRV+ + +P + + ++
Sbjct: 448 GVLSVTVVAAEDLPAVDFMGKADAFVVITL---KKSETKSKTRVVPDSLNPVWNQTFDF- 503
Query: 154 LPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSLPLRQETVAWYPLE 203
+E + L VW +D +++ +G V++ L+ + L E W+ L+
Sbjct: 504 -VVEDALHDLLTLEVWDHDKFGKDK-IGRVIMTLTRVMLEGEFQEWFELD 551
>At1g22610.1 68414.m02823 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1029
Score = 39.9 bits (89), Expect = 0.001
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 96 LSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLP 155
L V ++ A+ L + +PYV+V L K T+ L++NS+P + ++ +
Sbjct: 296 LYVSVVKARDLPVMDVSGSLDPYVEVKL-----GNYKGLTKHLEKNSNPIWKQIFAFSK- 349
Query: 156 IEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSLPLR---QETVA--WYPLE 203
E +++ L+ TV D L ++ F+G V I L+ +PLR +A WY LE
Sbjct: 350 -ERLQSNLLEVTVKDKDLLTKDDFVGRVHIDLTEVPLRVPPDSPLAPQWYRLE 401
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 96 LSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLP 155
L + ++ AQ L + +G P+ VK+ + R + H M ++ P
Sbjct: 459 LRIHVMEAQDLVPSDKGRVPDAIVKIQAGNQMRATRTPQMRTMNPQWHEELMFVVSE--P 516
Query: 156 IEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSLPLRQE 195
E + S+ + +++ LG V IP+ +P+RQE
Sbjct: 517 FEDMVIVSVDDRI----GPGKDEILGRVFIPVRDVPVRQE 552
>At3g55940.1 68416.m06216 phosphoinositide-specific phospholipase C,
putative similar to phosphoinositide specific
phospholipase C GI:857374 from [Arabidopsis thaliana]
Length = 584
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 113 APPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWHYD 172
+PP+ Y +V + P +KT+ L+ N P++ E+ E+ P+ + L+ V YD
Sbjct: 480 SPPDFYTRVGIAGVPADTVMKKTKTLEDNWIPAWDEVFEF--PLTVPELALLRIEVHEYD 537
Query: 173 SLQENQFLGGVVIPLSSL 190
+++ F G + +P+ L
Sbjct: 538 MSEKDDFGGQICLPVWEL 555
>At3g08510.1 68416.m00988 phosphoinositide-specific phospholipase C
(PLC2) identical to phosphoinositide specific
phospholipase C(AtPLC2) GI:857374 [Arabidopsis thaliana]
Length = 581
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 111 QGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWH 170
Q +PP+ Y +V + P +KT+ L+ N P++ E+ E+ P+ + L+ V
Sbjct: 475 QYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEF--PLTVPELALLRLEVHE 532
Query: 171 YDSLQENQFLGGVVIPLSSLPLRQETVAWYPL 202
YD +++ F G +P+ L E + +PL
Sbjct: 533 YDMSEKDDFGGQTCLPVWEL---SEGIRAFPL 561
>At1g20080.1 68414.m02513 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 535
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 94 GVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYR 153
G+LSV ++ A L +PYVK+ L D K +KT V N +P + E E+
Sbjct: 258 GLLSVKVIKAIKLKKKDLLGGSDPYVKLTLSGD--KVPGKKTVVKHSNLNPEWNE--EFD 313
Query: 154 LPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSL 190
L ++ +++ LQ V+ ++ + ++ +G VI L L
Sbjct: 314 LVVKEPESQELQLIVYDWEQVGKHDKIGMNVIQLKDL 350
>At5g58670.1 68418.m07351 phosphoinositide-specific phospholipase C
(PLC1) identical to phosphoinositide specific
phospholipase C [Arabidopsis thaliana] GI:902923
Length = 561
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 113 APPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWHYD 172
+PP+ Y KV + P +T + K P + + E+ P+ + L TV YD
Sbjct: 455 SPPDFYAKVGIAGVPLDTASYRTEIDKDEWFPIWDK--EFEFPLRVPELSLLCITVKDYD 512
Query: 173 SLQENQFLGGVVIPLSSL 190
S +N F G PLS +
Sbjct: 513 SNTQNDFAGQTCFPLSEV 530
>At2g20990.1 68415.m02485 C2 domain-containing protein (sytA)
similar to Ca2+-dependent lipid-binding protein (CLB1)
GI:2789434 from [Lycopersicon esculentum]
Length = 541
Score = 33.5 bits (73), Expect = 0.10
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 92 AGGVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLE 151
AGG+L V++ A+ + NPYV++Y K +RKT+ +K+N P + E
Sbjct: 418 AGGMLVVIVHSAEDVEGKHH---TNPYVRIYF-----KGEERKTKHVKKNRDPRWNEEFT 469
Query: 152 YRL---PIEAVKNRSLQATVWHYDSLQENQFLGGVVIPL 187
+ L P+ + + +T L + LG V IP+
Sbjct: 470 FMLEEPPVREKLHVEVLSTSSRIGLLHPKETLGYVDIPV 508
>At2g21010.1 68415.m02489 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 256
Score = 33.1 bits (72), Expect = 0.14
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 11/99 (11%)
Query: 92 AGGVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLE 151
AGG+L V++ A+ + NPYV +Y K +RKT+ +K+N P + E
Sbjct: 133 AGGMLVVIVHSAEDVEGKHH---TNPYVHIYF-----KGEERKTKNVKKNKDPKWNEEFS 184
Query: 152 YRL---PIEAVKNRSLQATVWHYDSLQENQFLGGVVIPL 187
+ L P+ + + +T L + LG V IP+
Sbjct: 185 FMLEEPPVHEKLHVEVFSTSSRIGLLHPKETLGYVDIPV 223
>At5g58700.1 68418.m07354 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 597
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 113 APPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWHYD 172
+PP+ +V+V + P E KT++ P + + E+ P+ + L+ V +D
Sbjct: 493 SPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNK--EFTFPLAVPELALLRVEVHEHD 550
Query: 173 SLQENQFLGGVVIPLSSL 190
+++ F G +P+S +
Sbjct: 551 VNEKDDFGGQTCLPVSEI 568
>At5g17980.1 68418.m02109 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1049
Score = 30.7 bits (66), Expect = 0.74
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 132 KRKTRVLKRNSHPSFMEMLEYRL---PIEAVKNRSLQATVWH---YDSLQENQFLGGVVI 185
+R+TR + R+ +P + E LE+ L P + L+ ++H + + N FLG + +
Sbjct: 38 RRRTRTIVRDLNPVWNETLEFSLAKRPSHQLFTDVLELDMYHDKNFGQTRRNNFLGRIRL 97
Query: 186 PLSS-LPLRQETVAWYPLE 203
+ +E + +YPLE
Sbjct: 98 GSDQFVGQGEEALIYYPLE 116
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 164 LQATVWHYDS-LQENQFLGGVVIPLSSLPLRQE-----TVAWYPLE 203
L+ +VW + ++ +QFLGG+ +S +PLR WY LE
Sbjct: 384 LEISVWDSSTGIETSQFLGGICFDVSEIPLRDPPDSPLAPQWYRLE 429
>At1g74720.1 68414.m08658 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1081
Score = 30.3 bits (65), Expect = 0.98
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 111 QGAPPNP--YVKVYLVPDPTKETKRKTRVLKRNSHPSFMEM--LEYRLPIEAVKNRSLQA 166
+G PPN YVKV + R + P + ++ L + AV +L+
Sbjct: 345 RGLPPNESAYVKVRTSNHFVRSKPAVNRPGESVDSPEWNQVFALGHNRSDSAVTGATLEI 404
Query: 167 TVWHYDSLQENQFLGGVVIPLSSLPLRQE-----TVAWYPLE 203
+ W D+ E+ FLGGV LS +P+R WY LE
Sbjct: 405 SAW--DASSES-FLGGVCFDLSEVPVRDPPDSPLAPQWYRLE 443
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 29.5 bits (63), Expect = 1.7
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 93 GGVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEY 152
G +L V ++ Q L T + +PYV V + + R + F E +
Sbjct: 9 GQILEVTVVGCQKLKDTEWFSRQDPYV----VLEYGGRSHRTRTCTDGGKNAVFQEKFIF 64
Query: 153 RLPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSLPLRQE 195
L IE + R L+ VW+ ++L + F+G I L + L QE
Sbjct: 65 TL-IEGL--RDLKVAVWNSNTLSTDDFIGNATIQLQKV-LSQE 103
>At5g58690.1 68418.m07353 phosphoinositide-specific phospholipase C
family protein contains Pfam profile: PF00388
phosphatidylinositol-specific phospholipase C
Length = 578
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 115 PNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWHYDSL 174
PN Y +V + + +KT+ ++ P + E E++L + + L+ V Y+
Sbjct: 476 PNFYTRVGITGVRGDKVMKKTKKEQKTWEPFWNEEFEFQLTVPEL--ALLRIEVHDYNMP 533
Query: 175 QENQFLGGVVIPLSSL 190
+++ F G +P+S L
Sbjct: 534 EKDDFSGQTCLPVSEL 549
>At2g21040.1 68415.m02495 C2 domain-containing protein low
similarity to phloem protein [Cucurbita maxima]
GI:4164541; contains Pfam profile PF00168: C2 domain
Length = 261
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 92 AGGVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLE 151
AGG+ V++ A+ + NPYV +Y K +RKT+ +K+N P + E
Sbjct: 14 AGGMFVVIVHSAEDVEGKHH---TNPYVHIYF-----KGEERKTKHVKKNKDPKWNEEFS 65
Query: 152 YRL 154
+ L
Sbjct: 66 FML 68
>At2g02030.1 68415.m00138 F-box family protein contains F-box domain
Pfam:PF00646
Length = 334
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 125 PDPTKETKRKTRVLKRNSHPS-FMEMLEYRLPIEAVKNRSLQATVWHYDSLQENQFLG 181
P PTKE KR+ + ++ P+ +E + RLP++++ Q H+ +L +++ G
Sbjct: 21 PTPTKEIKRRRKEFEKIHIPNEIVEEILVRLPVKSLTR--FQTVSKHWRTLITSKYFG 76
>At1g73580.1 68414.m08518 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 168
Score = 28.7 bits (61), Expect = 3.0
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 94 GVLSVLILHAQSLALTPQGAPPNPYVKVYLVPDPTKETKRKTRVLKRNSHPSFMEMLEYR 153
G+L V + +LA+ + +PYV + L K KT+V+K+N +P + E L +
Sbjct: 9 GILRVRVQRGVNLAVRDVSSS-DPYVVLKL-----GRQKLKTKVVKQNVNPQWQEDLSFT 62
Query: 154 LPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPL 187
+ N L V+ +D ++ +G I L
Sbjct: 63 V---TDPNLPLTLIVYDHDFFSKDDKMGDAEIDL 93
>At3g07940.1 68416.m00971 zinc finger and C2 domain protein,
putative similar to zinc finger and C2 domain protein
GI:9957238 from [Arabidopsis thaliana];contains Pfam
profile: PF01412 Putative GTP-ase activating protein for
Arf
Length = 385
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 134 KTRVLKRNSHPSFMEMLEYRLPIEAVKNRSLQATVWHYDSLQENQFLGGVVIPLSSL 190
KTRV+K N +P + E L +P E + L+ V+ D+ + F+G I + L
Sbjct: 263 KTRVIKNNLNPVWNETLMLSIP-EPMP--PLKVLVYDKDTFSTDDFMGEAEIDIQPL 316
>At1g76960.1 68414.m08960 expressed protein
Length = 52
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 98 VLILHAQSLALTPQGAPPNPYVKVYLVPDP 127
++I HAQSL TP G P PY + Y V P
Sbjct: 19 LIISHAQSLPGTPYGG-PGPYPRSYPVCYP 47
>At3g61300.1 68416.m06860 C2 domain-containing protein anthranilate
phosphoribosyltransferase (fragment) - Pisum sativum,
PIR:T06460
Length = 972
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 96 LSVLILHAQSLALTPQGAP-PNPYVKVYL 123
L V ++ AQ L + P PNPYVK+ L
Sbjct: 406 LRVNVIEAQDLVIVPDRTRLPNPYVKIRL 434
>At1g25320.1 68414.m03142 leucine-rich repeat transmembrane protein
kinase, putative similar to putative receptor-like
protein kinase GI:4262228 from [Arabidopsis thaliana]
Length = 702
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 122 YLVPDPTKETKRKTRVLKRNSHPSFM-EMLEYRLPIEAVKNRSLQATVWHYDSLQENQFL 180
YL P+ TK T + ++ S + EM+ RLPI V ++ W + E + +
Sbjct: 590 YLAPEATKATVKPSQKWDVYSFGVILLEMITGRLPIVFVGKSEMEIVKWIQMCIDEKKEM 649
Query: 181 GGVVIP 186
++ P
Sbjct: 650 SDILDP 655
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,454,247
Number of Sequences: 28952
Number of extensions: 163962
Number of successful extensions: 417
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 405
Number of HSP's gapped (non-prelim): 31
length of query: 207
length of database: 12,070,560
effective HSP length: 78
effective length of query: 129
effective length of database: 9,812,304
effective search space: 1265787216
effective search space used: 1265787216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -