Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001268-TA|BGIBMGA001268-PA|IPR011009|Protein
kinase-like, IPR008973|C2 calcium/lipid-binding region, CaLB,
IPR000403|Phosphatidylinositol 3- and 4-kinase, catalytic,
IPR000341|Phosphoinositide 3-kinase, ras-binding,
IPR002420|Phosphoinositide 3-kinase, C2, IPR001263|Phosphoinositide
3-kinase accessory region PIK, IPR001683|Phox-like
         (1505 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   4.7  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    25   6.2  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    25   6.2  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
            monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 4.7
 Identities = 15/77 (19%), Positives = 34/77 (44%)

Query: 1158 INFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKG 1217
            I +   +N V P    +  +L+++   L+ IK+ D+L         +  F+   T+ S  
Sbjct: 257  IKYRNDNNIVRPDFINMLMELQKNPQKLENIKLTDSLIAAQAFVFFLAGFETSSTTMSNA 316

Query: 1218 MIEIVTEAETLRAIQTE 1234
            + E+    +  + ++ E
Sbjct: 317  LYELALNQDVQKKLREE 333


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)

Query: 706 TRPLKTLRFTQASKIECGGF----YPRIIFDTWLN--LEDLPVNTLPRESRLVLTLHGRT 759
           TRPLK    TQ++K   G      +P   F    +  +E +P++ +P  S+     H + 
Sbjct: 328 TRPLKKEPITQSNKRTAGNLATREHPSRNFTMSEDGMIEVIPLSAIPEPSKNPAMGHWQM 387

Query: 760 QRTIDSQHPNENSPPSSQEA 779
                S  P + +PPS +E+
Sbjct: 388 SCVACSPPPRQ-TPPSRKES 406


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 848 YAHTGVKWTSGEEDKQKNISLKDLPSFDSLDGHTQSQLLHLIEQGAYQR--MPTECREVM 905
           + +T +K+  GEE +++ +  + + S  +LDG+   Q+    +Q   +R    TE + +M
Sbjct: 58  FKNTEIKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEKQTTIEREFSSTEMKAIM 117


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,464
Number of Sequences: 429
Number of extensions: 15182
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 3
length of query: 1505
length of database: 140,377
effective HSP length: 67
effective length of query: 1438
effective length of database: 111,634
effective search space: 160529692
effective search space used: 160529692
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)