Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001268-TA|BGIBMGA001268-PA|IPR011009|Protein
kinase-like, IPR008973|C2 calcium/lipid-binding region, CaLB,
IPR000403|Phosphatidylinositol 3- and 4-kinase, catalytic,
IPR000341|Phosphoinositide 3-kinase, ras-binding,
IPR002420|Phosphoinositide 3-kinase, C2, IPR001263|Phosphoinositide
3-kinase accessory region PIK, IPR001683|Phox-like
(1505 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44) 192 2e-48
SB_55283| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 5e-46
SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-14
SB_46138| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-08
SB_8914| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-05
SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.015
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 38 0.062
SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45) 38 0.081
SB_17078| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.11
SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09) 35 0.43
SB_11873| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 2.3
SB_23965| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.1
SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07) 31 7.1
SB_1254| Best HMM Match : Peptidase_U57 (HMM E-Value=0.98) 31 7.1
SB_15041| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 9.3
>SB_1933| Best HMM Match : PI3_PI4_kinase (HMM E-Value=4.06377e-44)
Length = 915
Score = 192 bits (467), Expect = 2e-48
Identities = 123/341 (36%), Positives = 180/341 (52%), Gaps = 33/341 (9%)
Query: 1063 RYTLMLRALLVICGENLNKTLLRQQLLVKSLCEMAVSVKCAKEXXXXXXXXXXXXXXXXX 1122
RY ++L LL ICGE + Q LV L ++A VK AK+
Sbjct: 38 RYHVILGGLLNICGEAQKEEFTFQDDLVTELIKVARKVKSAKDSARNNILQQELAALAGK 97
Query: 1123 XXXQPTALPLALHKYVHDLDVKSCTYFSSNTLPLKINFIGTD--NAVIPAMFKVGDDLRQ 1180
LP+ V +DV+SC YF+SN+ PL++ F D + +FK+GDD+RQ
Sbjct: 98 LCCV-FRLPITPSLEVVGMDVRSCGYFTSNSAPLRLVFRNVDPFGENVNVIFKMGDDMRQ 156
Query: 1181 DALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQ-------- 1232
D L +Q++ IM+ +WL+ GLDL+++T+Q + T GMIEIV++++ R+++
Sbjct: 157 DTLTMQLVGIMNKIWLQEGLDLKIITYQCMATGPGMGMIEIVSDSQISRSVEILAIAARQ 216
Query: 1233 ------TEWGLTGSFKDKPIAEWLAKHNPSELEYQRARDN-----FTASCAGYSVATYLL 1281
+ + + + K +++ A NP + + N T S S+ +LL
Sbjct: 217 LFRPRKRKGAVLKTIRRKKVSKGRAGANPPSKTRKNSTGNSHRFGLTGSFKDESINRWLL 276
Query: 1282 GI------CDRHNDNIMLKTSG-HLFHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDM 1334
R +N + +FHIDF K LG AQMFGNFKR DRAPFVLT DM
Sbjct: 277 KFNPDEKEYRRAVENFTASCAAVTVFHIDFSKILGHAQMFGNFKR----DRAPFVLTPDM 332
Query: 1335 VYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDLFAL 1375
YVINGG RP+ RFQHF++LC AFN++R H + L+L +L
Sbjct: 333 AYVINGGYRPSPRFQHFIDLCSRAFNLIRRHSNLFLNLLSL 373
Score = 49.6 bits (113), Expect = 2e-05
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 1430 LIHSSLKS-NMTQEGRLVSVECLGYEKRYDPEKHYVYALRIYRLGQATPSVLYRSYKHFT 1488
L+ +LK+ + +G + S + Y+KRY+ EK+Y+Y + I R + ++R + HF
Sbjct: 451 LLSFALKTYTLEMDGFIESARVVDYQKRYNTEKYYIYVINICRANSDQATFVFRRFGHFI 510
Query: 1489 ELYQKICLHFP 1499
EL+ K+ +P
Sbjct: 511 ELHAKLSELYP 521
>SB_55283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1342
Score = 184 bits (448), Expect = 5e-46
Identities = 102/223 (45%), Positives = 131/223 (58%), Gaps = 8/223 (3%)
Query: 1131 PLALHKYVHDLDVKSCTYFSSNTLPLKINFIGTDNAVIPA--MFKVGDDLRQDALVLQVI 1188
PL + L V +C Y S PL ++F D P +FK GDDLRQD L LQ+I
Sbjct: 1049 PLNPSYRLKQLKVDNCKYMDSKMRPLWLDFENFDELGEPVKIIFKSGDDLRQDMLTLQLI 1108
Query: 1189 KIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQTEW--GLTGSFKDKPI 1246
+IMD LW K GLDL M+ + L T + GMIE+VT +ET+ IQ + +TG+F I
Sbjct: 1109 RIMDRLWKKDGLDLEMIPYGCLSTGDHVGMIEVVTNSETIAKIQMKQMGAITGAFNKTCI 1168
Query: 1247 AEWLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGK 1306
+WLA N S+ A F SCAGY VATY+LG+ DRH+DNIM+ +G LFHIDFG
Sbjct: 1169 LDWLADRNGSKEALVEATHRFMLSCAGYCVATYVLGVGDRHSDNIMVHENGQLFHIDFGH 1228
Query: 1307 FLGDAQMFGNFKRLVYIDRAPFVLTHDMVYVINGGERPTQRFQ 1349
FLG+ + +R +R PFVLT V+VI G T+ FQ
Sbjct: 1229 FLGNFKNKFGIRR----ERVPFVLTDHFVHVITRGNDNTEGFQ 1267
Score = 57.2 bits (132), Expect = 9e-08
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 42/333 (12%)
Query: 702 IYHGTRPLKTLRFTQASKIECGGFYPRIIFDTWLNLEDLPVNTLPRESRLVLTLHGRTQR 761
IYHG L ++ T+ G P +++ ++NL L V +PR +RL L L G +
Sbjct: 679 IYHGNEVLSDIKQTKPQS----GNKP--LWNEFINLNIL-VCDIPRMARLCLVLFGVYVK 731
Query: 762 TIDSQHPNENSPPSSQEAEDSGDVLYEQVELGWAALQLFDFDGMLSSGNYVLPLWP---T 818
++ +N + + L W + LFDF G L G + WP T
Sbjct: 732 AA-ARRKKKN---------------LDYIPLAWVNVTLFDFRGNLRQGPLTIHAWPVPET 775
Query: 819 SCDRRXXXXXXXXXXXXXXXXVVNIEIPLYAHTGVKWTSGEEDKQKNISLKDLPSFDSLD 878
D + IE YA+ V + + ++ K + L+ L +D
Sbjct: 776 MPDLLNPIGTVVSNINTSTSPCLVIEFQRYANN-VVYPAYDKKKTGDNELEQLRQV--ID 832
Query: 879 GHTQSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNWY-GDHREQL 937
+ + L ++ + R ECR+ P +L LL+ W + Q+
Sbjct: 833 REPLAPIFELDKEFVW-RARMECRDYY----------PHSLGR-LLSCVKWNCKEDVAQM 880
Query: 938 IGLLRLWEKPSPLNAMHLLLPCFPDVAVRETAAKLLNEMSDDDLCRVLPQLTQALRHETY 997
LL++W + P A+ LL + D VRE A + + +M D DL + QL Q L++E+Y
Sbjct: 881 QVLLQIWPEMHPELALELLDCNYADQKVREFAVRCIEKMGDSDLMHYMLQLVQVLKYESY 940
Query: 998 XXXXXXXXXXXXXXXXXXXXXXXFWLLVHSLPN 1030
FWLL + N
Sbjct: 941 LDCELARFLLKRTLNNQNLGHELFWLLRAEMHN 973
>SB_3142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2209
Score = 80.2 bits (189), Expect = 1e-14
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 18/251 (7%)
Query: 365 DSEHKAFLKMALDVRKKFVYTDERTNPGHVIAARSGGKYPPN-----TSIKILVHHAHSD 419
D+E AF +M +VR F + E +N G+V++ ++ T + +++
Sbjct: 367 DAEVIAFGEMLSEVRSNFHWY-ESSNRGYVLSPALPSRFGKTICNRETEVVVVIFTEGRR 425
Query: 420 EPITFTSDVESKVEHVI-LTVVCSLDEDIREDMSG--YMLRVRGAKEYLTPGSSLSEYDY 476
+ F D + V+ V+ LT+ C + D+ + + ++L++ G EYL L EY+Y
Sbjct: 426 DTFRFAIDTWASVKEVLELTLSCLSNSDVNIEHASTTHVLKICGRSEYLEAQRKLVEYEY 485
Query: 477 IRECVRLEKDVTLCLHEGRDST--LARTERDDAKD-SHLTLDDLFPAQGATPMLSFDNLS 533
I+EC++ +K+V L E + LART DD D + D F T + + L+
Sbjct: 486 IQECLKFQKEVQFVLLENEKVSRHLARTASDDEIDLVPRSYKDFFNLSHTTAVSQY-GLT 544
Query: 534 ILLETLEGELSRAI--GVTSAEGSCSPKAVFQAVKAICALAGGVET--LHV-THTLNAFA 588
+L+E+ E SR + + P + Q KAIC+ +ET +HV LN F
Sbjct: 545 VLVESFTEETSRLLQEATSLVNPKFEPSPIIQLTKAICSTLASIETADIHVAVDALNLFH 604
Query: 589 QACTAQGANNV 599
+ NV
Sbjct: 605 EVNKNSAVLNV 615
Score = 46.8 bits (106), Expect = 1e-04
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 681 IEAVHCLPLCWSHDEYMFHAQ--IYHGTRPLKTLRFTQASKIECGGFYPRIIFDTWLNLE 738
I + H +PL W D F +Y+G L + T SK+ F + + WL
Sbjct: 671 ISSAHRIPLYWKQDFENFSVDGGVYYGGCLLCPIETTTQSKLT-RKFSELLQWGDWLKF- 728
Query: 739 DLPVNTLPRESRLVLTLHG 757
D+PV LPRESRL LTL+G
Sbjct: 729 DIPVKRLPRESRLCLTLYG 747
Score = 46.0 bits (104), Expect = 2e-04
Identities = 23/65 (35%), Positives = 28/65 (43%)
Query: 960 FPDVAVRETAAKLLNEMSDDDLCRVLPQLTQALRHETYXXXXXXXXXXXXXXXXXXXXXX 1019
FPD VR A + + SDD+LC LPQL QAL++E Y
Sbjct: 798 FPDRHVRSMAVRWMANFSDDELCDYLPQLVQALKYEIYHDSALTRFLVRRALGNVRLMHL 857
Query: 1020 XFWLL 1024
FW L
Sbjct: 858 LFWFL 862
>SB_46138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 58.4 bits (135), Expect = 4e-08
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 1173 KVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQ 1232
K GDDLRQ+ L Q++ + +W + + L + F + TS+ G+IE + A +L I+
Sbjct: 821 KCGDDLRQELLAYQLLSQLQAIWKQERVPLSLRPFAVVVTSDDSGLIEPIVNAVSLHQIK 880
Query: 1233 --TEWGLTGSFKDKPIAEWLAKHNPSEL---EYQRARDNFTASCAGY--SVATYLLGICD 1285
++ L F K L S L + R AG+ + T
Sbjct: 881 KNSQMSLLNYF-IKARGSCLGSETHSLLCRPLFSSERKIVFFFDAGFLWRIETNNNAGGG 939
Query: 1286 RHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
RHN NI+L G++ HIDFG L + F + +PF LTH+ V
Sbjct: 940 RHNGNILLDNYGYIIHIDFGFILSSSPGKLGF------ENSPFKLTHEFV 983
>SB_8914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 49.6 bits (113), Expect = 2e-05
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 1249 WLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIML-KTSGHLFHIDFGKF 1307
WL K SE+ + R R N+T S A S+ Y+LG+ DRH N+ML + +G + HIDFG
Sbjct: 818 WL-KSPSSEVWFDR-RTNYTRSLAVMSMVGYVLGLGDRHPSNLMLDRLTGRILHIDFGDC 875
Query: 1308 LGDAQMFGNFKRLVYIDRAPFVLTHDMVYVINGGERPT 1345
N + I ++T + V I+G R T
Sbjct: 876 FEVTAHLNNINSITTI--IINIVTFNKVTGIDGNYRLT 911
Score = 37.9 bits (84), Expect = 0.062
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 1135 HK-YVHDLDV-KSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMD 1192
HK +H +V S +S P K+ G++ + + K +DLRQD V+Q+ +++
Sbjct: 661 HKPVIHIRNVHSSLNVITSKQRPRKLCLAGSNGSDFMFLLKGHEDLRQDERVMQLFGLVN 720
Query: 1193 TLWLK----AGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAI 1231
TL + L + + +P S + G+I V +TL A+
Sbjct: 721 TLLASDPETSKRHLSIQRYAVIPLSTNSGLIGWVPHCDTLHAL 763
>SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2496
Score = 39.9 bits (89), Expect = 0.015
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 1260 YQRARDNFTASCAGYSVATYLLGICDRHNDNIML-KTSGHLFHIDFGKFLGDAQMFGNFK 1318
Y R +F + A + Y+LGI DRH N ++ +G L IDFG G A F
Sbjct: 2328 YLTLRTHFARTHACICICQYVLGIGDRHLSNFLVDMRTGGLIGIDFGHSFGSATQFQTVP 2387
Query: 1319 RLVYIDRAPFVLTHDMVYVI 1338
LV PF LT ++
Sbjct: 2388 ELV-----PFRLTRQFTNLL 2402
Score = 31.9 bits (69), Expect = 4.0
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 1155 PLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLK----AGLDLRMVTFQAL 1210
P ++ G D + K G+D+R D + Q+ +M+ + + + +LR+ T+Q +
Sbjct: 2164 PKRVTIRGDDERDHMFLVKGGEDIRLDQRIEQLFCMMNEVMSEDPACSQRNLRLRTYQVI 2223
Query: 1211 PTSNSKGMIEIVTEAETLRAI 1231
P + G+IE + + L+ +
Sbjct: 2224 PMTQRVGLIEWLKNTKPLKEL 2244
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 37.9 bits (84), Expect = 0.062
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 1448 VECLGYEKRYDPEKHYVYALRIYRLGQATPSVLYRSYKHFTELYQKICLHFP 1499
V+ + +KR P KHYVY + + + +V+YR Y F +L K+ FP
Sbjct: 9 VKIVDVQKRKIPSKHYVYVISV-TWSDGSVNVVYRRYSKFFDLQTKLLEEFP 59
>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
Length = 2022
Score = 37.5 bits (83), Expect = 0.081
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 1258 LEYQRARDNFTASCAGYSVATYLLGICDRHNDNIMLK-TSGHLFHIDF 1304
LE+ + S A S+ Y++G+ DRH DN+++ T+G + HID+
Sbjct: 1608 LEWWHMTKTYARSTAVMSMIGYIIGLGDRHLDNMLIDFTTGEVVHIDY 1655
>SB_17078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 37.1 bits (82), Expect = 0.11
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 1154 LPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLK----AGLDLRMVTFQA 1209
LP I +G+D + K DDLRQDA++ QV +++ L LR+ T++
Sbjct: 62 LPKIIACVGSDGVKRRQLVKGRDDLRQDAVMEQVFGMVNQLLANNTETRKRKLRVRTYKV 121
Query: 1210 LPTSNSKGMIE 1220
+P S GM+E
Sbjct: 122 IPLSQRSGMLE 132
Score = 32.7 bits (71), Expect = 2.3
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 1279 YLLGICDRHNDNIMLK-TSGHLFHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
Y++G+ DRH NI++ S L HID G F K L + PF LT D+V
Sbjct: 288 YIVGLGDRHVQNILVDCNSAELVHIDLG------VAFEQGKVLPTPETVPFRLTRDLV 339
>SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09)
Length = 1423
Score = 35.1 bits (77), Expect = 0.43
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1267 FTASCAGYSVATYLLGICDRHNDNIMLK-TSGHLFHIDF 1304
+ S A S+ Y++G+ DRH DN+++ T+G + HID+
Sbjct: 5 YARSTAVMSMIGYIIGLGDRHLDNMLIDFTTGEVVHIDY 43
>SB_11873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 32.7 bits (71), Expect = 2.3
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 481 VRLEKDVTLCLHEGRDSTLARTERDDAKDSHLTLDDLFPAQGATPMLSFDNLSILLETLE 540
V++E + +L E +D+ + AK+ H TL L AQG TP + + + + +T
Sbjct: 35 VKIESEESLQTQESKDAYKKHQGQKLAKEGHDTLVFLVDAQGYTPQEACEQVVRVSQTKA 94
Query: 541 GELS 544
G LS
Sbjct: 95 GTLS 98
>SB_23965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 32.3 bits (70), Expect = 3.1
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 1275 SVATYLLGICDRHNDNIML-KTSGHLFHID 1303
S+ Y+LG+ DRH +NI+ T+G H+D
Sbjct: 2 SMVGYILGLGDRHGENILFDSTNGECVHVD 31
>SB_1687| Best HMM Match : LRR_2 (HMM E-Value=4.6e-07)
Length = 483
Score = 31.1 bits (67), Expect = 7.1
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 858 GEEDKQKNISLKDLPSFDSLDGHTQSQLLHLIEQGAYQRMPTECREVMWEKRQY--LVQI 915
G Q N +D D D + ++ + +P EV+ E Y L Q+
Sbjct: 46 GSFQNQDNYCQEDDGGDDHNDDAGVADARDAVQSNVFDLLP---EEVILEILSYIPLKQL 102
Query: 916 PGALPLVLLAATNWYGDHREQLIGLLRLWEKPSPLNAMHLLLPCFPDVAVRETAAKLLNE 975
++P V + WY + + L LW+K + HL L CF +++ E+ LL E
Sbjct: 103 YTSIPFV---SKQWYANAKNPL-----LWQKLTFEETKHLTLGCF--MSIIESRCPLLKE 152
Query: 976 MS---DDDLCRVLPQLTQA 991
+S DLC L LT A
Sbjct: 153 LSLKCRSDLCS-LDFLTMA 170
>SB_1254| Best HMM Match : Peptidase_U57 (HMM E-Value=0.98)
Length = 375
Score = 31.1 bits (67), Expect = 7.1
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 1128 TALPLALHKYVHDLDVKSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQV 1187
T L L K VH + + T F TL + + + ++P +VG+ L QD V
Sbjct: 17 TPLGLKAEKTVHRVTLNPSTAFPGETLYVAVPKLSEGVMLVPGSLRVGETL-QDTSRYDV 75
Query: 1188 IKIMDTLWL 1196
K + L+L
Sbjct: 76 FKTYEELYL 84
>SB_15041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 236
Score = 30.7 bits (66), Expect = 9.3
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 548 GVTSAEGSCSPKAVFQAVKAICALAGGVETLHVTHTLNAFAQACTAQGANNVVRPEIERE 607
G+T+ +G C PK A ++ G V++ + ++ A + VR + +R
Sbjct: 155 GMTAVDGVCPPKGTHMTPTAPASIGGDVQSFRLQKICDSQAVLDNEITNHRQVRKKYKRA 214
Query: 608 QGAYCSVSLAAGSRRDCVSLQG 629
+VS+A+G +S G
Sbjct: 215 LAVTDAVSVASGIAAGALSSAG 236
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,140,802
Number of Sequences: 59808
Number of extensions: 1728717
Number of successful extensions: 3660
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3629
Number of HSP's gapped (non-prelim): 31
length of query: 1505
length of database: 16,821,457
effective HSP length: 92
effective length of query: 1413
effective length of database: 11,319,121
effective search space: 15993917973
effective search space used: 15993917973
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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