Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001268-TA|BGIBMGA001268-PA|IPR011009|Protein
kinase-like, IPR008973|C2 calcium/lipid-binding region, CaLB,
IPR000403|Phosphatidylinositol 3- and 4-kinase, catalytic,
IPR000341|Phosphoinositide 3-kinase, ras-binding,
IPR002420|Phosphoinositide 3-kinase, C2, IPR001263|Phosphoinositide
3-kinase accessory region PIK, IPR001683|Phox-like
(1505 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 233 9e-61
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 233 9e-61
Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical p... 128 4e-29
AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical ... 128 4e-29
AL033514-25|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical... 125 2e-28
U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein. 125 3e-28
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 119 1e-26
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 119 2e-26
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 119 2e-26
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 119 2e-26
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 98 4e-20
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 54 8e-07
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 54 8e-07
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 51 5e-06
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 51 5e-06
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 49 2e-05
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 49 2e-05
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 49 2e-05
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 46 3e-04
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 46 3e-04
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 37 0.13
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 36 0.17
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 233 bits (569), Expect = 9e-61
Identities = 137/381 (35%), Positives = 193/381 (50%), Gaps = 26/381 (6%)
Query: 1143 VKSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDL 1202
++ C+ F+SN PLKI F G N + K DD+RQDA V++++ MD +W GLDL
Sbjct: 1030 IEECSVFNSNAKPLKIVFRGL-NMNYSIIHKRDDDMRQDAFVMKMLNEMDRIWKSNGLDL 1088
Query: 1203 RMVTFQALPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNPSELEYQR 1262
RM+TF+ +P +GM E+V TL IQ E GL G D+ + +WL KHN E Y+
Sbjct: 1089 RMITFRIMPVGYRRGMGELVLNCATLMEIQKEEGLRGVLNDEILRKWLMKHNSDEFAYKE 1148
Query: 1263 ARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLVY 1322
A++NF SCAG+ + TY+LGI DRHNDNI+ +GH+FHIDFGK++GD QM F+R
Sbjct: 1149 AQENFIRSCAGWCIVTYVLGIGDRHNDNILFTKNGHVFHIDFGKYMGDWQMAAGFRR--- 1205
Query: 1323 IDRAPFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDLFALPSC-DSG 1381
DR PFV T +M +VIN G PTQ Q F++ CC AFN +R + + + +L + +C D
Sbjct: 1206 -DRVPFVFTTEMFHVINNGRAPTQYNQKFIDYCCKAFNHLRRNKNTLTNLLRIMACSDIP 1264
Query: 1382 G---SERTVAGGRPQMSLSGVPGVTSAAVSYVRXXXXXXXXXXXXXXXXXRLIHSSLKSN 1438
G + LS + I S +
Sbjct: 1265 GINMDSLAFVENNLMLDLSDTDATVQFTAMIQNSLGSAFVRLNFVAHTVAQFISSRPSFS 1324
Query: 1439 MTQEGRLVSVECLGYEKRYDP----------EKH----YVYALRI--YRLGQATPSVLYR 1482
+L V L Y + D EKH +Y ++ +R A S +YR
Sbjct: 1325 KQDPNKLSFVPEL-YTENSDGRISRVTVLKFEKHCIPNKIYMYKVEVHRKNVAVSSFIYR 1383
Query: 1483 SYKHFTELYQKICLHFPLAKV 1503
S+ F EL+ K+ FP+ V
Sbjct: 1384 SFAEFEELHTKLRARFPMMAV 1404
Score = 107 bits (256), Expect = 8e-23
Identities = 88/320 (27%), Positives = 145/320 (45%), Gaps = 26/320 (8%)
Query: 681 IEAVHCLPLCWS--HDEYMFHAQIYHGTRPLKTLRFTQASKIECGGFYPRIIFDTWLNLE 738
+ +VH +P W + E+ +YHGT+ L I+ F+PRI D + +
Sbjct: 606 LNSVHSIPEHWQSQYSEFYMSLDLYHGTQVLDGFSNKVPKTIKNDHFFPRIPLDLYAKFK 665
Query: 739 DLPVNTLPRESRLVLTLHGRTQRTIDSQHPNENSPPSSQEAEDSGDVLYEQVELGWAALQ 798
L + PRE+R+V+++ G + + +Q NE +P D+ V LG+ ++
Sbjct: 666 RLNLCQYPRETRIVVSISGTVRNS--AQAANEYNP----------DI----VMLGYCSVP 709
Query: 799 LFDFDGMLSSGNYVLPLWPTSCDRRXXXXXXXXXXXXXXXXVVNIEIPLYAHTGVKWTSG 858
L+D + + G LPL T ++ + + P+ + W +
Sbjct: 710 LYDENLFMRQGPLFLPL--TLLKKQPMLKPFGPYPY-----IKDARDPILIMSFKIWDTE 762
Query: 859 EEDKQKNISLKDLPS-FDSLDGHTQSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPG 917
I ++ +P F +LD TQ LL LIE + T+ ++++W+KR +L P
Sbjct: 763 IYFPNVVIDMQCIPQDFATLDIETQEYLLELIENQDTSTLETDDQDLIWQKRLHLTNQPE 822
Query: 918 ALPLVLLAATNWYGDHREQLIGLLRLWEKPSPLNAMHLLLPCFPDVAVRETAAKLLNEMS 977
ALPLVL + +W ++ +L W P AM LLP +PD +R A + L S
Sbjct: 823 ALPLVLSSLQDWSFGFVMRVYQILEEWAPLRPEIAMEFLLPKYPDERIRAHAVQSLARGS 882
Query: 978 DDDLCRVLPQLTQALRHETY 997
D L +PQ +ALR E Y
Sbjct: 883 TDFLYHTIPQFIEALRFELY 902
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
F39B1.1 protein.
Length = 1607
Score = 233 bits (569), Expect = 9e-61
Identities = 137/381 (35%), Positives = 193/381 (50%), Gaps = 26/381 (6%)
Query: 1143 VKSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDL 1202
++ C+ F+SN PLKI F G N + K DD+RQDA V++++ MD +W GLDL
Sbjct: 1030 IEECSVFNSNAKPLKIVFRGL-NMNYSIIHKRDDDMRQDAFVMKMLNEMDRIWKSNGLDL 1088
Query: 1203 RMVTFQALPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNPSELEYQR 1262
RM+TF+ +P +GM E+V TL IQ E GL G D+ + +WL KHN E Y+
Sbjct: 1089 RMITFRIMPVGYRRGMGELVLNCATLMEIQKEEGLRGVLNDEILRKWLMKHNSDEFAYKE 1148
Query: 1263 ARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLVY 1322
A++NF SCAG+ + TY+LGI DRHNDNI+ +GH+FHIDFGK++GD QM F+R
Sbjct: 1149 AQENFIRSCAGWCIVTYVLGIGDRHNDNILFTKNGHVFHIDFGKYMGDWQMAAGFRR--- 1205
Query: 1323 IDRAPFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDLFALPSC-DSG 1381
DR PFV T +M +VIN G PTQ Q F++ CC AFN +R + + + +L + +C D
Sbjct: 1206 -DRVPFVFTTEMFHVINNGRAPTQYNQKFIDYCCKAFNHLRRNKNTLTNLLRIMACSDIP 1264
Query: 1382 G---SERTVAGGRPQMSLSGVPGVTSAAVSYVRXXXXXXXXXXXXXXXXXRLIHSSLKSN 1438
G + LS + I S +
Sbjct: 1265 GINMDSLAFVENNLMLDLSDTDATVQFTAMIQNSLGSAFVRLNFVAHTVAQFISSRPSFS 1324
Query: 1439 MTQEGRLVSVECLGYEKRYDP----------EKH----YVYALRI--YRLGQATPSVLYR 1482
+L V L Y + D EKH +Y ++ +R A S +YR
Sbjct: 1325 KQDPNKLSFVPEL-YTENSDGRISRVTVLKFEKHCIPNKIYMYKVEVHRKNVAVSSFIYR 1383
Query: 1483 SYKHFTELYQKICLHFPLAKV 1503
S+ F EL+ K+ FP+ V
Sbjct: 1384 SFAEFEELHTKLRARFPMMAV 1404
Score = 107 bits (256), Expect = 8e-23
Identities = 88/320 (27%), Positives = 145/320 (45%), Gaps = 26/320 (8%)
Query: 681 IEAVHCLPLCWS--HDEYMFHAQIYHGTRPLKTLRFTQASKIECGGFYPRIIFDTWLNLE 738
+ +VH +P W + E+ +YHGT+ L I+ F+PRI D + +
Sbjct: 606 LNSVHSIPEHWQSQYSEFYMSLDLYHGTQVLDGFSNKVPKTIKNDHFFPRIPLDLYAKFK 665
Query: 739 DLPVNTLPRESRLVLTLHGRTQRTIDSQHPNENSPPSSQEAEDSGDVLYEQVELGWAALQ 798
L + PRE+R+V+++ G + + +Q NE +P D+ V LG+ ++
Sbjct: 666 RLNLCQYPRETRIVVSISGTVRNS--AQAANEYNP----------DI----VMLGYCSVP 709
Query: 799 LFDFDGMLSSGNYVLPLWPTSCDRRXXXXXXXXXXXXXXXXVVNIEIPLYAHTGVKWTSG 858
L+D + + G LPL T ++ + + P+ + W +
Sbjct: 710 LYDENLFMRQGPLFLPL--TLLKKQPMLKPFGPYPY-----IKDARDPILIMSFKIWDTE 762
Query: 859 EEDKQKNISLKDLPS-FDSLDGHTQSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPG 917
I ++ +P F +LD TQ LL LIE + T+ ++++W+KR +L P
Sbjct: 763 IYFPNVVIDMQCIPQDFATLDIETQEYLLELIENQDTSTLETDDQDLIWQKRLHLTNQPE 822
Query: 918 ALPLVLLAATNWYGDHREQLIGLLRLWEKPSPLNAMHLLLPCFPDVAVRETAAKLLNEMS 977
ALPLVL + +W ++ +L W P AM LLP +PD +R A + L S
Sbjct: 823 ALPLVLSSLQDWSFGFVMRVYQILEEWAPLRPEIAMEFLLPKYPDERIRAHAVQSLARGS 882
Query: 978 DDDLCRVLPQLTQALRHETY 997
D L +PQ +ALR E Y
Sbjct: 883 TDFLYHTIPQFIEALRFELY 902
>Z66519-14|CAA91377.2| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 128 bits (308), Expect = 4e-29
Identities = 85/237 (35%), Positives = 116/237 (48%), Gaps = 36/237 (15%)
Query: 1171 MFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRA 1230
+FK GDDLRQD LVLQV+++MD +W A +D + + LP G+IE+V +T+
Sbjct: 852 IFKNGDDLRQDMLVLQVLEVMDNIWKAANIDCCLNPYAVLPMGEMIGIIEVVPNCKTIFE 911
Query: 1231 IQTEWGLTG----SFKDKPIAEWLAKH----------------NPSELE---------YQ 1261
IQ G S + +W+ K NP E + Y
Sbjct: 912 IQVGTGFMNTAVRSIDPSFMNKWIRKQCGIEDEKKKSKKDSTKNPIEKKIDNTQAMKKYF 971
Query: 1262 RARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLV 1321
+ D F SC GYSVATY++GI DRH+DN+ML G FHIDFG LG G K +
Sbjct: 972 ESVDRFLYSCVGYSVATYIMGIKDRHSDNLMLTEDGKYFHIDFGHILG----HGKTKLGI 1027
Query: 1322 YIDRAPFVLTHDMVYVINGG---ERPTQRFQHFVELCCMAFNIVRAHHDHILDLFAL 1375
DR PF+LT + VI G + + Q F LC A+ ++ + D + LF L
Sbjct: 1028 QRDRQPFILTEHFMTVIRSGKSVDGNSHELQKFKTLCVEAYEVMWNNRDLFVSLFTL 1084
Score = 39.1 bits (87), Expect = 0.024
Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 13/249 (5%)
Query: 788 EQVELGWAALQLFDFDGMLSSGNYVLPLW---PTSCDRRXXXXXXXXXXXXXXXXVVN-- 842
E+ E+GW + L D+ L G ++ LW PT+ R ++
Sbjct: 475 EEFEVGWVNMSLTDWRDELRQGQFLFHLWAPEPTANRSRIGENGARIGTNAAVTIEISSY 534
Query: 843 ---IEIPLYA-HTGVKWTSGEEDKQKNISLKDLPSFDSLDGHTQSQLLHLIEQGAYQRMP 898
+ +P +T + + NI D S G+ + Q+L +
Sbjct: 535 GGRVRMPSQGQYTYLVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE 594
Query: 899 TECREVMWEKRQYLV-QIPGALPLVLLAATNWYG-DHREQLIGLLRLWEKPSPLNAMHLL 956
E R V W R+Y+ Q P L ++ A W ++ +L +L W+ PS A+ LL
Sbjct: 595 DEQRHV-WMWRRYIQKQEPDLLIVLSELAFVWTDRENFSELYVMLEKWKPPSVAAALTLL 653
Query: 957 LPCFPDVAVRETAAKLLNE-MSDDDLCRVLPQLTQALRHETYXXXXXXXXXXXXXXXXXX 1015
D +R+ A + LNE +S + L QAL++E
Sbjct: 654 GKRCTDRVIRKFAVEKLNEQLSPVTFHLFILPLIQALKYEPRAQSEVGMMLLTRALCDYR 713
Query: 1016 XXXXXFWLL 1024
FWLL
Sbjct: 714 IGHRLFWLL 722
>AL110499-5|CAB57914.1| 1146|Caenorhabditis elegans Hypothetical
protein B0334.8 protein.
Length = 1146
Score = 128 bits (308), Expect = 4e-29
Identities = 85/237 (35%), Positives = 116/237 (48%), Gaps = 36/237 (15%)
Query: 1171 MFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRA 1230
+FK GDDLRQD LVLQV+++MD +W A +D + + LP G+IE+V +T+
Sbjct: 852 IFKNGDDLRQDMLVLQVLEVMDNIWKAANIDCCLNPYAVLPMGEMIGIIEVVPNCKTIFE 911
Query: 1231 IQTEWGLTG----SFKDKPIAEWLAKH----------------NPSELE---------YQ 1261
IQ G S + +W+ K NP E + Y
Sbjct: 912 IQVGTGFMNTAVRSIDPSFMNKWIRKQCGIEDEKKKSKKDSTKNPIEKKIDNTQAMKKYF 971
Query: 1262 RARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLV 1321
+ D F SC GYSVATY++GI DRH+DN+ML G FHIDFG LG G K +
Sbjct: 972 ESVDRFLYSCVGYSVATYIMGIKDRHSDNLMLTEDGKYFHIDFGHILG----HGKTKLGI 1027
Query: 1322 YIDRAPFVLTHDMVYVINGG---ERPTQRFQHFVELCCMAFNIVRAHHDHILDLFAL 1375
DR PF+LT + VI G + + Q F LC A+ ++ + D + LF L
Sbjct: 1028 QRDRQPFILTEHFMTVIRSGKSVDGNSHELQKFKTLCVEAYEVMWNNRDLFVSLFTL 1084
Score = 39.1 bits (87), Expect = 0.024
Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 13/249 (5%)
Query: 788 EQVELGWAALQLFDFDGMLSSGNYVLPLW---PTSCDRRXXXXXXXXXXXXXXXXVVN-- 842
E+ E+GW + L D+ L G ++ LW PT+ R ++
Sbjct: 475 EEFEVGWVNMSLTDWRDELRQGQFLFHLWAPEPTANRSRIGENGARIGTNAAVTIEISSY 534
Query: 843 ---IEIPLYA-HTGVKWTSGEEDKQKNISLKDLPSFDSLDGHTQSQLLHLIEQGAYQRMP 898
+ +P +T + + NI D S G+ + Q+L +
Sbjct: 535 GGRVRMPSQGQYTYLVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE 594
Query: 899 TECREVMWEKRQYLV-QIPGALPLVLLAATNWYG-DHREQLIGLLRLWEKPSPLNAMHLL 956
E R V W R+Y+ Q P L ++ A W ++ +L +L W+ PS A+ LL
Sbjct: 595 DEQRHV-WMWRRYIQKQEPDLLIVLSELAFVWTDRENFSELYVMLEKWKPPSVAAALTLL 653
Query: 957 LPCFPDVAVRETAAKLLNE-MSDDDLCRVLPQLTQALRHETYXXXXXXXXXXXXXXXXXX 1015
D +R+ A + LNE +S + L QAL++E
Sbjct: 654 GKRCTDRVIRKFAVEKLNEQLSPVTFHLFILPLIQALKYEPRAQSEVGMMLLTRALCDYR 713
Query: 1016 XXXXXFWLL 1024
FWLL
Sbjct: 714 IGHRLFWLL 722
>AL033514-25|CAA22108.1| 2121|Caenorhabditis elegans Hypothetical
protein Y75B8A.24 protein.
Length = 2121
Score = 125 bits (302), Expect = 2e-28
Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 16/208 (7%)
Query: 1170 AMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLR 1229
A+FKVGDD+RQD L LQ++++M +W GL +R+ ++ + TS G+IE V +++
Sbjct: 1866 AIFKVGDDVRQDMLALQLMQLMKNVWAGLGLPVRVFPYRVVATSPGCGVIECVPNSKSRD 1925
Query: 1230 AI--QTEWGLTGSFKDKPIAEWLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRH 1287
+ QT++GL FK + E S +Q AR NF S A YSV ++LL I DRH
Sbjct: 1926 QLGRQTDFGLYEYFKTQYGDE-------SSETFQEARRNFVRSMAAYSVFSFLLQIKDRH 1978
Query: 1288 NDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMVYVINGGERPTQR 1347
N NIM+ GH+ HIDFG F+ ++ GN F L+ +MV I GG+
Sbjct: 1979 NGNIMIDLDGHIIHIDFG-FMFESSPGGNLG-----FEPDFKLSEEMV-AIMGGKMEAAP 2031
Query: 1348 FQHFVELCCMAFNIVRAHHDHILDLFAL 1375
F+ F LC A+ VR +H + L +L
Sbjct: 2032 FRQFASLCVHAYLAVRPYHKSFVSLVSL 2059
Score = 37.9 bits (84), Expect = 0.055
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 912 LVQIPGALPLVLLAATNWYGDHREQLIGLLRLWEKPSPLNAMHLLLP-CFPDVAVR-ETA 969
+ IP ALPL L + + + +L W + SP+ A+ LL P +P + + A
Sbjct: 1595 VAHIPEALPLFLGNGSTVF--ETSDMSHVLT-WARCSPVMALSLLTPRIYPMHPISMQYA 1651
Query: 970 AKLLNEMSDDDLCRVLPQLTQALRHET 996
++L S D+L +PQ+ QA+R++T
Sbjct: 1652 VRVLRSYSADELLLYIPQIVQAVRYDT 1678
>U56101-1|AAC47459.1| 1167|Caenorhabditis elegans AGE-1 protein.
Length = 1167
Score = 125 bits (301), Expect = 3e-28
Identities = 84/237 (35%), Positives = 115/237 (48%), Gaps = 36/237 (15%)
Query: 1171 MFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRA 1230
+FK GDDLRQD LVLQV+++MD +W A +D + + LP G+IE+V +T+
Sbjct: 873 IFKNGDDLRQDMLVLQVLEVMDNIWKAANIDCCLNPYAVLPMGEMIGIIEVVPNCKTIFE 932
Query: 1231 IQTEWGLTG----SFKDKPIAEWLAKH----------------NPSELE---------YQ 1261
IQ G S + +W+ K NP E + Y
Sbjct: 933 IQVGTGFMNTAVRSIDPSFMNKWIRKQCGIEDEKKKSKKDSTKNPIEKKIDNTQAMKKYF 992
Query: 1262 RARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLV 1321
+ D F SC GYSVATY++GI DRH+DN+ML G HIDFG LG G K +
Sbjct: 993 ESVDRFLYSCVGYSVATYIMGIKDRHSDNLMLTEDGKYVHIDFGHILG----HGKTKLGI 1048
Query: 1322 YIDRAPFVLTHDMVYVINGG---ERPTQRFQHFVELCCMAFNIVRAHHDHILDLFAL 1375
DR PF+LT + VI G + + Q F LC A+ ++ + D + LF L
Sbjct: 1049 QRDRQPFILTEHFMTVIRSGKSVDGNSHELQKFKTLCVEAYEVMWNNRDLFVSLFTL 1105
Score = 39.1 bits (87), Expect = 0.024
Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 13/249 (5%)
Query: 788 EQVELGWAALQLFDFDGMLSSGNYVLPLW---PTSCDRRXXXXXXXXXXXXXXXXVVN-- 842
E+ E+GW + L D+ L G ++ LW PT+ R ++
Sbjct: 496 EEFEVGWVNMSLTDWRDELRQGQFLFHLWAPEPTANRSRIGENGARIGTNAAVTIEISSY 555
Query: 843 ---IEIPLYA-HTGVKWTSGEEDKQKNISLKDLPSFDSLDGHTQSQLLHLIEQGAYQRMP 898
+ +P +T + + NI D S G+ + Q+L +
Sbjct: 556 GGRVRMPSQGQYTYLVKHRSTWTETLNIMGDDYESCIRDPGYKKLQMLVKKHESGIVLEE 615
Query: 899 TECREVMWEKRQYLV-QIPGALPLVLLAATNWYG-DHREQLIGLLRLWEKPSPLNAMHLL 956
E R V W R+Y+ Q P L ++ A W ++ +L +L W+ PS A+ LL
Sbjct: 616 DEQRHV-WMWRRYIQKQEPDLLIVLSELAFVWTDRENFSELYVMLEKWKPPSVAAALTLL 674
Query: 957 LPCFPDVAVRETAAKLLNE-MSDDDLCRVLPQLTQALRHETYXXXXXXXXXXXXXXXXXX 1015
D +R+ A + LNE +S + L QAL++E
Sbjct: 675 GKRCTDRVIRKFAVEKLNEQLSPVTFHLFILPLIQALKYEPRAQSEVGMMLLTRALCDYR 734
Query: 1016 XXXXXFWLL 1024
FWLL
Sbjct: 735 IGHRLFWLL 743
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 119 bits (287), Expect = 1e-26
Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 27/243 (11%)
Query: 1145 SCTYFSSNTLPLKINFI-----GTDNAVIP----AMFKVGDDLRQDALVLQVIKIMDTLW 1195
+ ++F S +P KI+F G + IP +FK GDDLRQD L+ Q+++++D +
Sbjct: 606 TASFFKSEMMPAKISFKVLQPNGKADRNIPEAYTVIFKTGDDLRQDQLIQQMVRLIDIIL 665
Query: 1196 LKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNP 1255
K LDL++ + L T +G ++ + +++ LRAIQ ++ + K I E + + P
Sbjct: 666 KKGQLDLKLTPYLVLSTGVGQGFVQCI-KSKPLRAIQEQYK---AHKMDRIREAMKELRP 721
Query: 1256 SELEY---QRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQ 1312
+ + DN+ S AGYSV Y+LG+ DRH DN++L +G LFH+DFG LG
Sbjct: 722 GDGPFGIEPNVIDNYVRSLAGYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDP 781
Query: 1313 MFGNFKRLVYIDRAPFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDL 1372
K + P LT +MV V+ G + +++F FV+ A+ I+R H + +L+L
Sbjct: 782 -----KPMP----PPMKLTSEMVQVMGGVK--SKQFLEFVQHVDSAYRILRRHSNVLLNL 830
Query: 1373 FAL 1375
F+L
Sbjct: 831 FSL 833
Score = 54.0 bits (124), Expect = 8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 882 QSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNW-YGDHREQLIGL 940
+ +L ++ + Q + E R+++W+ R YL Q P AL L + NW + + + L
Sbjct: 309 KDRLETIVNLPSSQVLTREQRDLVWKFRHYLRQFPKALN-KYLRSVNWVHPQEVKTALAL 367
Query: 941 LRLWEKPSPLNAMHLLLPCFPDVAVRE-TAAKLLNEMSDDDLCRVLPQLTQALRHE 995
+ WE +A+ LL F AVR + ++LL S + + LPQL QAL++E
Sbjct: 368 MNDWELIEAEDALELLSSAFTHPAVRAYSVSRLLEAASPEQVLLYLPQLVQALKYE 423
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 119 bits (286), Expect = 2e-26
Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 27/243 (11%)
Query: 1145 SCTYFSSNTLPLKINFI-----GTDNAVIP----AMFKVGDDLRQDALVLQVIKIMDTLW 1195
+ ++F S +P KI+F G + IP +FK GDDLRQD L+ Q+++++D +
Sbjct: 359 TASFFKSEMMPAKISFKVLQPNGKADRNIPEEYTVIFKTGDDLRQDQLIQQMVRLIDIIL 418
Query: 1196 LKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNP 1255
K LDL++ + L T +G ++ + +++ LRAIQ ++ + K I E + + P
Sbjct: 419 KKGQLDLKLTPYLVLSTGVGQGFVQCI-KSKPLRAIQEQYK---AHKMDCIREAMKELRP 474
Query: 1256 SELEY---QRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQ 1312
+ + DN+ S AGYSV Y+LG+ DRH DN++L +G LFH+DFG LG
Sbjct: 475 GDGPFGIEPNVIDNYVRSLAGYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDP 534
Query: 1313 MFGNFKRLVYIDRAPFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDL 1372
K + P LT +MV V+ G + +++F FV+ A+ I+R H + +L+L
Sbjct: 535 -----KPMP----PPMKLTSEMVQVMGGVK--SKQFLEFVQHVDSAYRILRRHSNVLLNL 583
Query: 1373 FAL 1375
F+L
Sbjct: 584 FSL 586
Score = 54.0 bits (124), Expect = 8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 882 QSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNW-YGDHREQLIGL 940
+ +L ++ + Q + E R+++W+ R YL Q P AL L + NW + + + L
Sbjct: 62 KDRLETIVNLPSSQVLTREQRDLVWKFRHYLRQFPKALN-KYLRSVNWVHPQEVKTALAL 120
Query: 941 LRLWEKPSPLNAMHLLLPCFPDVAVRE-TAAKLLNEMSDDDLCRVLPQLTQALRHE 995
+ WE +A+ LL F AVR + ++LL S + + LPQL QAL++E
Sbjct: 121 MNDWELIEAEDALELLSSAFTHPAVRAYSVSRLLEAASPEQVLLYLPQLVQALKYE 176
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 119 bits (286), Expect = 2e-26
Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 27/243 (11%)
Query: 1145 SCTYFSSNTLPLKINFI-----GTDNAVIP----AMFKVGDDLRQDALVLQVIKIMDTLW 1195
+ ++F S +P KI+F G + IP +FK GDDLRQD L+ Q+++++D +
Sbjct: 606 TASFFKSEMMPAKISFKVLQPNGKADRNIPEEYTVIFKTGDDLRQDQLIQQMVRLIDIIL 665
Query: 1196 LKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNP 1255
K LDL++ + L T +G ++ + +++ LRAIQ ++ + K I E + + P
Sbjct: 666 KKGQLDLKLTPYLVLSTGVGQGFVQCI-KSKPLRAIQEQYK---AHKMDCIREAMKELRP 721
Query: 1256 SELEY---QRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQ 1312
+ + DN+ S AGYSV Y+LG+ DRH DN++L +G LFH+DFG LG
Sbjct: 722 GDGPFGIEPNVIDNYVRSLAGYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDP 781
Query: 1313 MFGNFKRLVYIDRAPFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDL 1372
K + P LT +MV V+ G + +++F FV+ A+ I+R H + +L+L
Sbjct: 782 -----KPMP----PPMKLTSEMVQVMGGVK--SKQFLEFVQHVDSAYRILRRHSNVLLNL 830
Query: 1373 FAL 1375
F+L
Sbjct: 831 FSL 833
Score = 54.0 bits (124), Expect = 8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 882 QSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNW-YGDHREQLIGL 940
+ +L ++ + Q + E R+++W+ R YL Q P AL L + NW + + + L
Sbjct: 309 KDRLETIVNLPSSQVLTREQRDLVWKFRHYLRQFPKALN-KYLRSVNWVHPQEVKTALAL 367
Query: 941 LRLWEKPSPLNAMHLLLPCFPDVAVRE-TAAKLLNEMSDDDLCRVLPQLTQALRHE 995
+ WE +A+ LL F AVR + ++LL S + + LPQL QAL++E
Sbjct: 368 MNDWELIEAEDALELLSSAFTHPAVRAYSVSRLLEAASPEQVLLYLPQLVQALKYE 423
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 119 bits (286), Expect = 2e-26
Identities = 82/243 (33%), Positives = 134/243 (55%), Gaps = 27/243 (11%)
Query: 1145 SCTYFSSNTLPLKINFI-----GTDNAVIP----AMFKVGDDLRQDALVLQVIKIMDTLW 1195
+ ++F S +P KI+F G + IP +FK GDDLRQD L+ Q+++++D +
Sbjct: 610 TASFFKSEMMPAKISFKVLQPNGKADRNIPEEYTVIFKTGDDLRQDQLIQQMVRLIDIIL 669
Query: 1196 LKAGLDLRMVTFQALPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNP 1255
K LDL++ + L T +G ++ + +++ LRAIQ ++ + K I E + + P
Sbjct: 670 KKGQLDLKLTPYLVLSTGVGQGFVQCI-KSKPLRAIQEQYK---AHKMDCIREAMKELRP 725
Query: 1256 SELEY---QRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQ 1312
+ + DN+ S AGYSV Y+LG+ DRH DN++L +G LFH+DFG LG
Sbjct: 726 GDGPFGIEPNVIDNYVRSLAGYSVIMYILGLGDRHLDNLLLCENGKLFHVDFGFILGRDP 785
Query: 1313 MFGNFKRLVYIDRAPFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHDHILDL 1372
K + P LT +MV V+ G + +++F FV+ A+ I+R H + +L+L
Sbjct: 786 -----KPMP----PPMKLTSEMVQVMGGVK--SKQFLEFVQHVDSAYRILRRHSNVLLNL 834
Query: 1373 FAL 1375
F+L
Sbjct: 835 FSL 837
Score = 54.0 bits (124), Expect = 8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 882 QSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNW-YGDHREQLIGL 940
+ +L ++ + Q + E R+++W+ R YL Q P AL L + NW + + + L
Sbjct: 313 KDRLETIVNLPSSQVLTREQRDLVWKFRHYLRQFPKALN-KYLRSVNWVHPQEVKTALAL 371
Query: 941 LRLWEKPSPLNAMHLLLPCFPDVAVRE-TAAKLLNEMSDDDLCRVLPQLTQALRHE 995
+ WE +A+ LL F AVR + ++LL S + + LPQL QAL++E
Sbjct: 372 MNDWELIEAEDALELLSSAFTHPAVRAYSVSRLLEAASPEQVLLYLPQLVQALKYE 427
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical protein
F35H12.4 protein.
Length = 666
Score = 98.3 bits (234), Expect = 4e-20
Identities = 70/222 (31%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 1167 VIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEIVTEAE 1226
+IP + K GDDL Q+A Q++ LW + G+ L + ++ + + G+IE V +
Sbjct: 396 LIPVIVKTGDDLSQEAFAQQLLFTFKDLWHEEGVPLYLRPYKIVCIGSDAGLIEPVLDTL 455
Query: 1227 TLRAIQTEWGLTGSFK-DKPIAEWLAKHN------PSELE-YQRARDNFTASCAGYSVAT 1278
+L I+ LT F+ + + KH+ P E Y A+ NF S A YS+ +
Sbjct: 456 SLHQIKRH--LTNVFRMNGNVTTPSLKHHFENVFGPVNSETYVNAQKNFIQSTAAYSLVS 513
Query: 1279 YLLGICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMVYVI 1338
Y L + DRHN NI+L GHL HID+G L + R + + APF LT +++ V+
Sbjct: 514 YYLQLKDRHNGNILLDMDGHLIHIDYGFLLSSS------PRNLGFETAPFKLTTEIIDVM 567
Query: 1339 NGGERPTQRFQHFVELCCMAFNIVRAHHDHILDLFALPSCDS 1380
G + + F +F L R HH I+ L + S S
Sbjct: 568 GGID--SDMFLYFKSLLLRGLMAARKHHRRIVSLAEIMSAGS 607
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 54.0 bits (124), Expect = 8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 882 QSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNW-YGDHREQLIGL 940
+ +L ++ + Q + E R+++W+ R YL Q P AL L + NW + + + L
Sbjct: 309 KDRLETIVNLPSSQVLTREQRDLVWKFRHYLRQFPKALN-KYLRSVNWVHPQEVKTALAL 367
Query: 941 LRLWEKPSPLNAMHLLLPCFPDVAVRE-TAAKLLNEMSDDDLCRVLPQLTQALRHE 995
+ WE +A+ LL F AVR + ++LL S + + LPQL QAL++E
Sbjct: 368 MNDWELIEAEDALELLSSAFTHPAVRAYSVSRLLEAASPEQVLLYLPQLVQALKYE 423
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 1145 SCTYFSSNTLPLKINFI-----GTDNAVIP----AMFKVGDDLRQDALVLQVIKIMDTLW 1195
+ ++F S +P KI+F G + IP +FK GDDLRQD L+ Q+++++D +
Sbjct: 606 TASFFKSEMMPAKISFKVLQPNGKADRNIPEEYTVIFKTGDDLRQDQLIQQMVRLIDIIL 665
Query: 1196 LKAGLDLRMVTF 1207
K LDL++ +
Sbjct: 666 KKGQLDLKLTPY 677
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 54.0 bits (124), Expect = 8e-07
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 882 QSQLLHLIEQGAYQRMPTECREVMWEKRQYLVQIPGALPLVLLAATNW-YGDHREQLIGL 940
+ +L ++ + Q + E R+++W+ R YL Q P AL L + NW + + + L
Sbjct: 313 KDRLETIVNLPSSQVLTREQRDLVWKFRHYLRQFPKALN-KYLRSVNWVHPQEVKTALAL 371
Query: 941 LRLWEKPSPLNAMHLLLPCFPDVAVRE-TAAKLLNEMSDDDLCRVLPQLTQALRHE 995
+ WE +A+ LL F AVR + ++LL S + + LPQL QAL++E
Sbjct: 372 MNDWELIEAEDALELLSSAFTHPAVRAYSVSRLLEAASPEQVLLYLPQLVQALKYE 427
Score = 46.0 bits (104), Expect = 2e-04
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 1145 SCTYFSSNTLPLKINFI-----GTDNAVIP----AMFKVGDDLRQDALVLQVIKIMDTLW 1195
+ ++F S +P KI+F G + IP +FK GDDLRQD L+ Q+++++D +
Sbjct: 610 TASFFKSEMMPAKISFKVLQPNGKADRNIPEEYTVIFKTGDDLRQDQLIQQMVRLIDIIL 669
Query: 1196 LKAGLDLRMVTF 1207
K LDL++ +
Sbjct: 670 KKGQLDLKLTPY 681
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein 363,
isoform b protein.
Length = 2692
Score = 51.2 bits (117), Expect = 5e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 1249 WLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIML-KTSGHLFHIDFGKF 1307
WL K SE+ + R R N+T S A S+ Y+LG+ DRH N+ML + +G + HIDFG
Sbjct: 2476 WL-KSPSSEVWFDR-RTNYTRSVACMSMVGYILGLGDRHPSNLMLDRLTGKVVHIDFGDC 2533
Query: 1308 LGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
A + R + +R PF LT ++
Sbjct: 2534 FEVAML-----REKFPERVPFRLTRMLI 2556
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein 363,
isoform a protein.
Length = 2695
Score = 51.2 bits (117), Expect = 5e-06
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 1249 WLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIML-KTSGHLFHIDFGKF 1307
WL K SE+ + R R N+T S A S+ Y+LG+ DRH N+ML + +G + HIDFG
Sbjct: 2479 WL-KSPSSEVWFDR-RTNYTRSVACMSMVGYILGLGDRHPSNLMLDRLTGKVVHIDFGDC 2536
Query: 1308 LGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
A + R + +R PF LT ++
Sbjct: 2537 FEVAML-----REKFPERVPFRLTRMLI 2559
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 1242 KDKPIA--EWLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHL 1299
K+ P+ +W P ++ +R F S A SV Y+ G+ DRH N+M+ T+G
Sbjct: 2309 KNTPVVMGKWFRIQYPEAGQWFASRKLFAKSTAVMSVIGYIFGLGDRHTKNLMVHTTGKC 2368
Query: 1300 FHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
H+DF + G LV PF LT +M+
Sbjct: 2369 IHVDFDMIFNKGETLGT-PELV-----PFRLTQNMI 2398
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 1242 KDKPIA--EWLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHL 1299
K+ P+ +W P ++ +R F S A SV Y+ G+ DRH N+M+ T+G
Sbjct: 2326 KNTPVVMGKWFRIQYPEAGQWFASRKLFAKSTAVMSVIGYIFGLGDRHTKNLMVHTTGKC 2385
Query: 1300 FHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
H+DF + G LV PF LT +M+
Sbjct: 2386 IHVDFDMIFNKGETLGT-PELV-----PFRLTQNMI 2415
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 49.2 bits (112), Expect = 2e-05
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 1242 KDKPIA--EWLAKHNPSELEYQRARDNFTASCAGYSVATYLLGICDRHNDNIMLKTSGHL 1299
K+ P+ +W P ++ +R F S A SV Y+ G+ DRH N+M+ T+G
Sbjct: 2309 KNTPVVMGKWFRIQYPEAGQWFASRKLFAKSTAVMSVIGYIFGLGDRHTKNLMVHTTGKC 2368
Query: 1300 FHIDFGKFLGDAQMFGNFKRLVYIDRAPFVLTHDMV 1335
H+DF + G LV PF LT +M+
Sbjct: 2369 IHVDFDMIFNKGETLGT-PELV-----PFRLTQNMI 2398
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 45.6 bits (103), Expect = 3e-04
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 1267 FTASCAGYSVATYLLGICDRHNDNIMLKTS-GHLFHIDFGKFLGDAQMFGNFKRLVYIDR 1325
++ S A S+ +LG+ DRH DN+++ GH+ HID+ F K L +
Sbjct: 1948 YSRSLAVMSMVGSVLGLGDRHLDNLLVDLKWGHVVHIDYN------ICFDKGKNLRIPET 2001
Query: 1326 APFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHD---HILDLFAL-PSCDSG 1381
PF LT +M + + P++ + F E C + +R+ H +LD F P D
Sbjct: 2002 VPFRLTRNMRHALG----PSEMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDWT 2057
Query: 1382 GSERTVAGG 1390
E T G
Sbjct: 2058 SHEHTATSG 2066
Score = 37.9 bits (84), Expect = 0.055
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 1144 KSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLR 1203
+ T + T P K+ F+G+D + +FK +DL D V+Q +++ + + L+ G
Sbjct: 1756 RQVTILPTKTRPKKLGFVGSDGKQVAFLFKGREDLHLDERVMQFLRLCNVM-LQPGKGKH 1814
Query: 1204 ---MVTFQA-----LPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNP 1255
+ +QA +P G+I+ V A + I +W K+K + + K+
Sbjct: 1815 RQSVAAYQAHHYAVIPLGPRSGLIKWVEGATPMFHIYRKW----QMKEKALKQATKKNGE 1870
Query: 1256 SELEYQR 1262
+ E +R
Sbjct: 1871 TVPEIER 1877
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-mediated
mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 45.6 bits (103), Expect = 3e-04
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 1267 FTASCAGYSVATYLLGICDRHNDNIMLKTS-GHLFHIDFGKFLGDAQMFGNFKRLVYIDR 1325
++ S A S+ +LG+ DRH DN+++ GH+ HID+ F K L +
Sbjct: 1948 YSRSLAVMSMVGSVLGLGDRHLDNLLVDLKWGHVVHIDYN------ICFDKGKNLRIPET 2001
Query: 1326 APFVLTHDMVYVINGGERPTQRFQHFVELCCMAFNIVRAHHD---HILDLFAL-PSCDSG 1381
PF LT +M + + P++ + F E C + +R+ H +LD F P D
Sbjct: 2002 VPFRLTRNMRHALG----PSEMYGTFRESCVHVLSTLRSGHQVLTMLLDAFVFDPLVDWT 2057
Query: 1382 GSERTVAGG 1390
E T G
Sbjct: 2058 SHEHTATSG 2066
Score = 37.9 bits (84), Expect = 0.055
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 1144 KSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLR 1203
+ T + T P K+ F+G+D + +FK +DL D V+Q +++ + + L+ G
Sbjct: 1756 RQVTILPTKTRPKKLGFVGSDGKQVAFLFKGREDLHLDERVMQFLRLCNVM-LQPGKGKH 1814
Query: 1204 ---MVTFQA-----LPTSNSKGMIEIVTEAETLRAIQTEWGLTGSFKDKPIAEWLAKHNP 1255
+ +QA +P G+I+ V A + I +W K+K + + K+
Sbjct: 1815 RQSVAAYQAHHYAVIPLGPRSGLIKWVEGATPMFHIYRKW----QMKEKALKQATKKNGE 1870
Query: 1256 SELEYQR 1262
+ E +R
Sbjct: 1871 TVPEIER 1877
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 36.7 bits (81), Expect = 0.13
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 1266 NFTASCAGYSVATYLLGICDRHNDNIMLKTSGHLF-HIDFGKFLGDAQMFGNFKRLVYID 1324
N+ S A +S+ Y++G+ DRH NI+ F HID G L ++ + L +
Sbjct: 473 NYRQSLATWSIVCYIVGLGDRHASNILFDQKLCTFVHIDLGMILEYSK-----RTLPVPE 527
Query: 1325 RAPFVLTHDMV 1335
+ PF +T D++
Sbjct: 528 QVPFRITRDVL 538
Score = 31.1 bits (67), Expect = 6.3
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 1162 GTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLRMVTFQALPTSNSKGMIEI 1221
G+D ++K DD+RQD LV Q+ + + + KA L T+ +P G+IE
Sbjct: 335 GSDGKWYKTVWKK-DDVRQDVLVEQMFDVTNNMLEKAMLR----TYNVVPLDTECGVIEF 389
Query: 1222 ----VTEAETLRAIQTEWGLTGSFKDKPIA 1247
V+ E + + E GL F + ++
Sbjct: 390 CGGTVSLKEVMCGVTREGGLHREFNSEEVS 419
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 36.3 bits (80), Expect = 0.17
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 1144 KSCTYFSSNTLPLKINFIGTDNAVIPAMFKVGDDLRQDALVLQVIKIMDTLWLKAGLDLR 1203
+ T + T P K+ F+G+D + +FK +DL D V+Q +++ + + L+ G
Sbjct: 1756 RQVTILPTKTRPKKLGFVGSDGKQVAFLFKGREDLHLDERVMQFLRLCNVM-LQPGKGKH 1814
Query: 1204 ---MVTFQA-----LPTSNSKGMIEIVTEAETLRAIQTEW 1235
+ +QA +P G+I+ V A + I +W
Sbjct: 1815 RQSVAAYQAHHYAVIPLGPRSGLIKWVEGATPMFHIYRKW 1854
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,236,765
Number of Sequences: 27539
Number of extensions: 1298874
Number of successful extensions: 2893
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2814
Number of HSP's gapped (non-prelim): 60
length of query: 1505
length of database: 12,573,161
effective HSP length: 91
effective length of query: 1414
effective length of database: 10,067,112
effective search space: 14234896368
effective search space used: 14234896368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 66 (30.7 bits)
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