Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001267-TA|BGIBMGA001267-PA|IPR000569|HECT
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 213 7e-55
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 176 6e-44
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 170 4e-42
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 112 1e-24
05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,116... 99 2e-20
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 85 2e-16
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 72 2e-12
02_04_0520 - 23628183-23628195,23629354-23630036 35 0.26
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873... 33 0.78
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 31 4.2
12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362 31 5.5
12_01_0647 - 5485100-5487028 31 5.5
04_04_1584 + 34601927-34602144,34603324-34603510,34604239-346044... 31 5.5
04_04_1438 - 33609242-33609349,33609571-33609663,33609840-336098... 31 5.5
04_04_0323 - 24392043-24393021,24393135-24393544 31 5.5
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 30 7.3
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 30 9.6
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 213 bits (519), Expect = 7e-55
Identities = 130/368 (35%), Positives = 213/368 (57%), Gaps = 23/368 (6%)
Query: 557 LRLRVRRSHLIEDALVVLEMISMERALDLKKQLVVEFEGEQGVDEGGVSKEFFQLIVEEI 616
LR+ VRR++++ED+ + + R+ DLK +L V+F+GE+G+D GG+++E++QL+ I
Sbjct: 3276 LRISVRRAYVLEDSY---NQLRLRRSQDLKGRLTVQFQGEEGIDAGGLTREWYQLLSRVI 3332
Query: 617 FNPDYGMFTHQQDSRNVWFNPTS-FETE--AQFTLIGIVLGLAIYNNVILAVNFPMVVYR 673
F+ +FT ++ NP S ++TE + F +G V+ A+++ +L V+F Y+
Sbjct: 3333 FDKGALLFTTVGNNATFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYK 3392
Query: 674 KLLGRKGSFEDLVDWNPILYNGLKDMLEYTGDDLEEVYY-----QTFRICYQDVFGTNMF 728
+LG K ++ D+ +P Y LK MLE D+ ++ + + I Y+ T+
Sbjct: 3393 HILGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDPDEEKHILYEKNEVTD-- 3450
Query: 729 HELKVNGDNIFVTQENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPE 788
+ELK G NI VT+E K E+VDL A+ +L ++ Q AF GF + L + F +
Sbjct: 3451 YELKPGGRNIRVTEETKHEYVDLVAEHILTTAIRPQINAFLEGFTELVPRE-LISLFHDK 3509
Query: 789 EVEMLVCGSKVFDFHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSD 848
E+E+L+ G DF +L+ + EY GY+ S ++ FW +V+ ED + LQF TG+
Sbjct: 3510 ELELLISGLPEIDFDDLKANAEYI-GYSPASPVILWFWEVVNGFSKEDMARFLQFVTGTS 3568
Query: 849 RVPVGGLCNL-------NFVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAI 901
+VP+ G L F I + +RLP+AHTCFN L LPEY ++++L++RLL AI
Sbjct: 3569 KVPLEGFKALQGISGPQRFQIHKAYGAPERLPSAHTCFNQLDLPEYSSKEQLEERLLLAI 3628
Query: 902 N-YSKGFG 908
+ S+GFG
Sbjct: 3629 HEASEGFG 3636
>05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 176 bits (429), Expect = 6e-44
Identities = 123/371 (33%), Positives = 182/371 (49%), Gaps = 28/371 (7%)
Query: 558 RLRVRRSHLIEDALVVLEMISMERALDLKKQLVVEFEGEQGVDE-----GGVSKEFFQLI 612
R ++RR+ L+EDA L M+S E DLK + V F E GV+E GG+ K+F + I
Sbjct: 668 RFKIRRNRLLEDAFDQLSMLSEE---DLKGPIRVVFVNEHGVEEAGIDGGGIFKDFMENI 724
Query: 613 VEEIFNPDYGMFTHQQDSRNVWFNPTSFETEAQ----FTLIGIVLGLAIYNNVILAVNFP 668
F+ YG+F D ++ NP S Q F +G +LG AIY +++ + F
Sbjct: 725 TRAAFDVQYGLFKETADHL-LYPNPGSGLVHEQHLQYFHFLGSLLGKAIYEGILVDLPFA 783
Query: 669 MVVYRKLLGRKGSFEDLVDWNPILYNGLKDMLEYTGDDLE-EVYYQTFRICYQDVFGTNM 727
KL + DL +P LY L + Y GD + E+Y+ + + +G
Sbjct: 784 TFFLSKLKHKYNFLNDLPSLDPELYRHLLSLKHYDGDISQLELYF----VIVNNEYGEQS 839
Query: 728 FHELKVNGDNIFVTQENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRP 787
EL G ++ VT EN ++ L A+ LN + Q F RGF + + F
Sbjct: 840 EEELLPGGRDMRVTSENVITYIHLVANHRLNYQIRAQSTHFLRGFQQLIPNEWIN-MFNE 898
Query: 788 EEVEMLVCGS-KVFDFHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTG 846
E ++L+ GS + D +L +T Y GGY D +++ FW ++ S +++K L+F TG
Sbjct: 899 HEFQVLISGSLESLDIDDLRSNTNYSGGYHPDHELIDIFWEVLKSFSSHNQKKFLKFVTG 958
Query: 847 SDRVPVGGLCNL--NFVIARNG------PDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLL 898
R P+ G L F I R G D DRLPT+ TC N+L LP Y + +L+ +LL
Sbjct: 959 CSRGPLLGFQYLEPKFCIQRAGVPGMEEEDEDRLPTSATCMNLLKLPPYRNKTQLESKLL 1018
Query: 899 KAINYSKGFGL 909
AIN GF L
Sbjct: 1019 YAINAEAGFDL 1029
>03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384,
27059759-27059866,27060314-27060406,27060499-27060669,
27061505-27061757,27061860-27062138,27062939-27063273,
27063364-27064332,27064711-27065182,27065243-27065291,
27066564-27066804,27067606-27067695,27068172-27068294,
27068365-27068418
Length = 1175
Score = 170 bits (414), Expect = 4e-42
Identities = 116/371 (31%), Positives = 178/371 (47%), Gaps = 21/371 (5%)
Query: 557 LRLRVRRSHLIEDALVVLEMISMERALDLKKQLVVEFE-GEQGVDEGGVSKEFFQLIVEE 615
+ + +RR H++ED L + + + V E E G+D GG+SKEF + +
Sbjct: 807 IEIVIRRGHIVEDGYRQLNCLGSKLKSCIHVSFVSECGLPEAGLDYGGLSKEFLTDLSKA 866
Query: 616 IFNPDYGMFTHQQ--DSRNVWFNPTSFETEA--QFTLIGIVLGLAIYNNVILAVNFPMVV 671
F+P+YG+F+ DS + N +G V+G A+Y ++L F V
Sbjct: 867 AFSPEYGLFSQASASDSSLIPSNSAKLLDNGIDMIEFLGRVVGKALYEGILLDYCFSPVF 926
Query: 672 YRKLLGRKGSFEDLVDWNPILYNGLKDMLEYTGDDLEEVYYQTFRICYQDVFGTNMFHEL 731
+KLLGR ++L + LY L + Y GD +E++ F + +++ G + HEL
Sbjct: 927 VQKLLGRYSFLDELSTLDSELYRSLMQLKHYEGD-VEDLCLD-FTLT-EELGGRRIVHEL 983
Query: 732 KVNGDNIFVTQENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVE 791
+ G NI VT ENK +V AD+ LN + AF RG + S L F E +
Sbjct: 984 RPGGKNISVTNENKLHYVHAIADYKLNRQILPFANAFYRGLGDLISPSWLSLFNANEFNQ 1043
Query: 792 MLVCGSKVFDFHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVP 851
+L G + FD +L +T+Y GGY S+ V+ FW ++ ++ LL+F T R P
Sbjct: 1044 LLSGGLQDFDVDDLRNNTKYTGGYTESSRSVKLFWEVIKGFKPTERCMLLKFVTSCSRAP 1103
Query: 852 VGGL-------------CNLNFVIARNGPDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLL 898
+ G C++ G D DRLP+A TC+N L LP Y L+ +LL
Sbjct: 1104 LLGFKYLQPSFTIHKVPCDVTLWATIGGQDVDRLPSASTCYNTLKLPTYKRSSTLRSKLL 1163
Query: 899 KAINYSKGFGL 909
AI+ + GF L
Sbjct: 1164 YAISSNTGFEL 1174
>05_05_0136 - 22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 112 bits (270), Expect = 1e-24
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 24/289 (8%)
Query: 641 ETEAQFTLIGIVLGLAIYNNVILAVNFPMVVYRKLLGRKGSFEDLVDWNPIL------YN 694
E QF L+G V+ A+ +N IL + F YR +LG++ + D+ ++P L +
Sbjct: 1192 EVNKQFHLLGQVVAKAVKDNRILDIPFSKAFYRLILGQELNIYDIHSFDPELAMTLMEFK 1251
Query: 695 GLKDMLEY----TGDDLEEVYYQTFRIC-YQDV---FGTNMFHELKVNGDNIF--VTQEN 744
L +Y + D + ++R C +D+ F + E ++ +N V+ +N
Sbjct: 1252 ALAARRKYLESSSSGDCKSTSDLSYRGCRIEDLAIEFALPGYPEYVLSLENSLDNVSADN 1311
Query: 745 KKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSK-VFDFH 803
+++V D + + Q AF+ GF V S L F +E+E L+CG + +DF
Sbjct: 1312 LEQYVSFVVDATIRSGIARQLEAFKSGFNEVFPLSMLQVFSE-DELERLLCGEQDTWDFA 1370
Query: 804 ELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNLN--FV 861
+L ++D GY S S V + ++ +R LQF TGS R+P GGL LN
Sbjct: 1371 KLVDHIKFDHGYTSSSPPVINLLEVIQEFEGHQRRAFLQFITGSPRLPPGGLAALNPKLT 1430
Query: 862 IAR---NGPDC-DRLPTAHTCFNVLLLPEYDTRDKLQDRLLKAINYSKG 906
+ R N + D LP+ TC N L LP Y ++DK++++LL AI +G
Sbjct: 1431 VVRKQHNSNEADDDLPSVMTCANYLKLPPYSSKDKMREKLLYAITEGQG 1479
>05_01_0168 + 1162459-1162785,1163609-1163719,1163853-1163969,
1164082-1164240,1164663-1164797,1165116-1165268,
1165358-1165479,1165599-1166541,1166677-1166728,
1166873-1167963,1168058-1168384,1168479-1168559,
1168649-1168717,1168809-1168937,1169038-1169121,
1169210-1169275
Length = 1321
Score = 98.7 bits (235), Expect = 2e-20
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 21/306 (6%)
Query: 621 YGMFTHQQDSRNVWFNPTSFETEAQ-FTLIGIVLGLAIYNNVILAVNFPMVVYRKLLGRK 679
+G+F S N S Q F L+G ++ A+ + +L + Y+ +L +
Sbjct: 1012 FGLFPQPWSSANTSSQGISLSNVVQKFKLLGHLVARAVLDGRVLDIPLSKAFYKIMLEQD 1071
Query: 680 GSFEDLVDWNPIL------YNGL----KDMLEYTGDDLEEVYYQTFRI---CYQDVFGTN 726
D+ ++P L + L K + E + ++ Y+ R+ C N
Sbjct: 1072 LDIYDIPSFDPKLGKTVMEFQALVKRKKFLEERASNPAADLSYKNVRLEDLCLDFTLPGN 1131
Query: 727 MFHELKVNGDNIFVTQENKKEFVDLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFR 786
+EL G VT +N +E+V D L + Q AF+ G V L F
Sbjct: 1132 PEYELVPGGSEKMVTLDNLEEYVSSIVDATLKSGISNQIEAFKAGINKVFALKTL-RLFS 1190
Query: 787 PEEVEMLVCGSK-VFDFHELEKSTEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTT 845
+E+E ++CG + + ++LE +D GY ++S V F I+ ED+R L FTT
Sbjct: 1191 EDEMERILCGEQDSWASNKLEDHINFDYGYDANSASVISFLEILREFGREDQRAFLHFTT 1250
Query: 846 GSDRVPVGGLCNLNFVIARNGPDCD-----RLPTAHTCFNVLLLPEYDTRDKLQDRLLKA 900
G+ ++P+GGL +L+ + CD LP+ +TC + LP Y +++ ++ +L A
Sbjct: 1251 GAPQLPLGGLASLDPKLTVVRKQCDGKVDNELPSVNTCRHFFKLPPYSSKEIMRQKLKYA 1310
Query: 901 INYSKG 906
I G
Sbjct: 1311 IKEGLG 1316
>02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 85.4 bits (202), Expect = 2e-16
Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 35/279 (12%)
Query: 646 FTLIGIVLGLAIYNNVILAVNFPMVVYRKLLGRKGSFEDLVDWNPILYNGLKDM------ 699
F L+G V+ + + +L + +Y+ +LG++ D++ ++ L+++
Sbjct: 1483 FRLVGRVMAKVLQDGRLLDLPLSTALYKLILGQELDLFDIISFDAEFGKTLQELQILVER 1542
Query: 700 ---LEYT-GDDLEEVYYQTFR------ICYQDVFGTNMFHELKVNGDNIFVTQENKKEFV 749
LE T G + EV FR +C + LK +N V N +E+V
Sbjct: 1543 KRFLESTYGMNQLEVTDLRFRGTPIEDLCLDFTLPGYPDYILKEGEENTIVNIYNLEEYV 1602
Query: 750 DLYADFLLNVSVETQFRAFRRGFLMVTDESPLGAFFRPEEVEMLVCGSK-VFDFHELEKS 808
L D + + Q AFR GF V D S L F PEE++ L+CG + +++ L +
Sbjct: 1603 TLVVDATVKSGIMRQVEAFRSGFNQVFDISSL-KIFSPEELDYLICGRREIWEPDSLVDN 1661
Query: 809 TEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNLN--FVIARNG 866
++D GY + S + + I+ E + QF TG+ R+P GGL LN I R
Sbjct: 1662 IKFDHGYTAKSPAIVNLLEIMAEFTPEQQHAFCQFVTGAPRLPPGGLAALNPKLTIVRKH 1721
Query: 867 PDC---------------DRLPTAHTCFNVLLLPEYDTR 890
P D LP+ TC N L LP Y T+
Sbjct: 1722 PSSAVNTSNIAGVTESADDDLPSVMTCANYLKLPPYSTK 1760
Score = 35.1 bits (77), Expect = 0.26
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 558 RLRVRRSHLIEDALVVLEMISMERALDLKKQLVVEFEGEQGVDEGGVSKEFFQLIVEEIF 617
++RV R+ +++ A V+EM S +RA+ L VE+ GE G G + EF+ L+ E+
Sbjct: 1354 KVRVSRNRILDSAAKVMEMFSSQRAV-----LEVEYFGEVGTGL-GPTLEFYTLLSHELQ 1407
Query: 618 NPDYGMFTHQQDS 630
+ G++ S
Sbjct: 1408 SVRLGLWRSSSPS 1420
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 72.1 bits (169), Expect = 2e-12
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 10/216 (4%)
Query: 561 VRRSHLIEDALVVLEMISMERALDLKKQLVVEFEGEQGVDEGGVSKEFFQLIVEEIFNPD 620
+ R HL++++ E I R +L+ L +EF+ E+ G V +E+F ++ + +F+P
Sbjct: 526 IDRQHLLDESF---EYIIQARPSELRSGLFMEFKNEEATGPG-VLREWFCMVCQALFSPQ 581
Query: 621 YGMFTHQQDSRNVWF-NPTSFETEAQ---FTLIGIVLGLAIYNNVILAVNFPMVVYRKLL 676
+F+ R +F N TS F G ++GLA+ + V + + ++ L
Sbjct: 582 QVLFSPCPSDRQRFFLNGTSAVDPLHLKYFIFSGRIIGLALMHRVQVGITLDRTLFLHLA 641
Query: 677 GRKGSFEDLVDWNPILYNGLKDMLEYTGDDLEEVYYQTFRICYQDVFGTNMFHELKVNGD 736
GR ED+ +P++Y K +LE ++ + R ++ G+ EL G
Sbjct: 642 GRSIKLEDISAADPVMYASCKRILEMDAAVVDGLELTFSRDVHE--LGSRRTIELCSGGK 699
Query: 737 NIFVTQENKKEFVDLYADFLLNVSVETQFRAFRRGF 772
++ V N++ ++DL S+ Q F RGF
Sbjct: 700 DLHVNIRNRELYIDLLIKSTFVDSISVQLTHFVRGF 735
Score = 46.8 bits (106), Expect = 8e-05
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 809 TEYDGGYASDSKIVQDFWGIVHSLPLEDKRKLLQFTTGSDRVPVGGLCNL--NFVIARNG 866
T + G+ SD + + V SL +E +R+LL F T +P G L I +
Sbjct: 729 THFVRGF-SDILVDPELQKAVESLSIEQQRQLLFFWTSVKYLPSDGFGGLASKLYIYKVS 787
Query: 867 PDCDRLPTAHTCFNVLLLPEYDTRDKLQDRLLK 899
DRLP++HTCF L LP Y + +++L K
Sbjct: 788 ESADRLPSSHTCFYRLCLPAYPSLKVTRNQLQK 820
>02_04_0520 - 23628183-23628195,23629354-23630036
Length = 231
Score = 35.1 bits (77), Expect = 0.26
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 253 IDSVAAPQLDVASCRRAFQYLAKVPTEYYSTDLVIALKSLGSY--LSKDLKSEKLSIEDA 310
ID A L+ R+A + + +Y+ +LV+AL+ L + +DLK E + I+D+
Sbjct: 119 IDRCAGGDLNALRRRQAGRVFSVAAIRFYAAELVLALEHLHGLGVVYRDLKPENVLIQDS 178
Query: 311 VNCFVITFEL 320
+ ++ F+L
Sbjct: 179 GHIMLVDFDL 188
>01_06_1513 -
37884198-37884485,37884966-37886951,37886976-37887305,
37887397-37887471,37887543-37887734,37887922-37888173,
37888248-37888803,37888881-37889088,37889624-37889736,
37890029-37890060,37890545-37890619
Length = 1368
Score = 33.5 bits (73), Expect = 0.78
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 58 CGNVNCDNRYCASSGAARNLSPNEAAAEAIKLFYKEARLCSSVTPNKVSRTDSNSYEPSP 117
CG + N C S A S + +++EA L+ ++ SS N S++ PS
Sbjct: 851 CGTCSLINCSCQSDRANSGSSASSSSSEASTLYGRKKNKKSS-GRNFHSQSRETKENPST 909
Query: 118 SSTLGPNHKNTSENKE--NQNITTPEPSTASRGEPHTS 153
++G + K + N E N T S + G+P S
Sbjct: 910 QDSMGDSEKRSVSNVEIDTNNYTMENQSRNNDGDPDKS 947
>01_01_0908 +
7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 31.1 bits (67), Expect = 4.2
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 93 EARLCSSVTPNKVSRTDS--NSYEPSPSSTLGPNHKNTSENKENQNITTPEPSTASRGEP 150
+A+LC P KV N+ + S + + +N ++ E+ T P P S P
Sbjct: 360 DAKLCRR-KPKKVRLLSEIINANQVEDSRSDEVHRENAADPCEDDRSTIPVPMEVSMDIP 418
Query: 151 HTSHTAXXXXXXXXXXYNSKDYQNVVLDGAPL 182
++HT + Y +VV DG+ L
Sbjct: 419 VSNHTVGEDGLKSSKNKTKRKYSDVVDDGSSL 450
>12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362
Length = 197
Score = 30.7 bits (66), Expect = 5.5
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 74 ARNLSPNEAAAEAIKLFYKEARLCSSVTPNKVSRTDSNSYEPSPSSTLGPNHKNTSENKE 133
+RN N A + K FYK A+L S +K + S++ P P G + N +
Sbjct: 56 SRNTGYNPALIKKQKEFYKNAKLISKYKRSKKQQNQSSNPPPFPIPKEGGDDANNASKLH 115
Query: 134 NQNITTPEPS 143
++ PS
Sbjct: 116 SKKKKRVAPS 125
>12_01_0647 - 5485100-5487028
Length = 642
Score = 30.7 bits (66), Expect = 5.5
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 465 VSVLDSRTPYLPFEDFYNEPLSDVIEMDKDCEDYEMV 501
V+++D PYL ED ++ LS + M+K CED+ M+
Sbjct: 16 VNLIDKALPYLD-EDRNSDELSQPLMMNKLCEDWLMI 51
>04_04_1584 +
34601927-34602144,34603324-34603510,34604239-34604496,
34604866-34604965,34608523-34608639,34608704-34608804,
34609035-34610141
Length = 695
Score = 30.7 bits (66), Expect = 5.5
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 79 PNEAAAEAIKLFYKEARLCSSVTPNKVSRTDSNSYEPSPSSTLGPNHKNTSENKENQNIT 138
P ++ I + Y+ R S+ + K+ D E PSS +G +H + + T
Sbjct: 95 PAAVGSQEIAVPYRYTRYSSTCSRRKLGHGDVEEDEAEPSSPVGRHHIRARDWVSGRRET 154
Query: 139 TPEP 142
P+P
Sbjct: 155 PPQP 158
>04_04_1438 -
33609242-33609349,33609571-33609663,33609840-33609884,
33610000-33610055,33610362-33610468,33610605-33610806,
33611068-33611122,33611129-33611167,33611664-33611725,
33611875-33611988,33612618-33612627,33612750-33612835,
33613008-33613377
Length = 448
Score = 30.7 bits (66), Expect = 5.5
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 69 ASSGAARNLSPNEAAAEAIKLFYKEARLCSSVTPNKVSRTDSNSYEPSPSS 119
ASS A R L P+ +AA +I RLC +P+ + + S+ P P++
Sbjct: 10 ASSAAHRRLPPSRSAASSILRAPNRGRLCPG-SPSVLRASSSSPSSPQPTA 59
>04_04_0323 - 24392043-24393021,24393135-24393544
Length = 462
Score = 30.7 bits (66), Expect = 5.5
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 253 IDSVAAPQLDVASCRRAFQYLAKVPTEYYSTDLVIALKSLGSY--LSKDLKSEKLSIEDA 310
ID L+ R+ + + +Y+ +LV+AL L S + +DLK E + I+D+
Sbjct: 111 IDRCGGGDLNSLRRRQTEKMFSDSVIRFYAAELVLALDYLHSLGIVYRDLKPENVLIQDS 170
Query: 311 VNCFVITFEL 320
+ ++ F+L
Sbjct: 171 GHIMLVDFDL 180
>09_04_0497 -
18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 30.3 bits (65), Expect = 7.3
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 71 SGAARNLSPNEAAAEAIKLFYKEARLCSSVTPNKVSRTDSNSYEPSPSSTLG----PNHK 126
S A +N + A A++L Y+ A + S TP+ + YE + G P
Sbjct: 705 SAACKNEPESTEAKRAVELLYETALISSGYTPDSPAELGGKIYEMMTIALGGRWGRPEES 764
Query: 127 NTSENKENQNITTPEPSTASRGEP 150
+ ++ N + + E S EP
Sbjct: 765 EAATSESNVEVESSEGSATEVVEP 788
>08_02_0678 -
19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 29.9 bits (64), Expect = 9.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 92 KEARLCSSVTPNKVSRTDSNSYEPSPSSTLGPNHKNTSENKENQNITTPEP 142
KEA L SS P+ TD ++ E + + GPN++N N P P
Sbjct: 557 KEA-LDSSAQPSDRGTTDGSAQESDGNHSQGPNYQNYQGGNLNYQYQPPSP 606
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,993,197
Number of Sequences: 37544
Number of extensions: 1046148
Number of successful extensions: 2171
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2136
Number of HSP's gapped (non-prelim): 24
length of query: 910
length of database: 14,793,348
effective HSP length: 89
effective length of query: 821
effective length of database: 11,451,932
effective search space: 9402036172
effective search space used: 9402036172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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