Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001266-TA|BGIBMGA001266-PA|IPR007875|Sprouty
(213 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54729| Best HMM Match : Sprouty (HMM E-Value=4.4e-11) 52 3e-07
SB_38999| Best HMM Match : Transp_Tc5_C (HMM E-Value=6.5) 44 1e-04
SB_35285| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 30 1.7
SB_12521| Best HMM Match : Sprouty (HMM E-Value=0.48) 29 2.9
SB_17346| Best HMM Match : PHD (HMM E-Value=2.1e-09) 29 3.8
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_22282| Best HMM Match : 7tm_2 (HMM E-Value=9.5e-09) 28 5.0
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 28 5.0
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 28 6.7
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_31348| Best HMM Match : ERM (HMM E-Value=0) 27 8.8
>SB_54729| Best HMM Match : Sprouty (HMM E-Value=4.4e-11)
Length = 308
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 121 CLCSAEACVDYASCMCCVKALFYHXXXXXXXXXXXX---------XXXXRLACVGALAVP 171
C +E VDYA+CMCCVK LFYH R C+G LA+
Sbjct: 213 CGFDSEEVVDYATCMCCVKGLFYHCTKDSEDEGSMADEPCSCTGPACVPRWGCLGLLALL 272
Query: 172 LPCLWLYWP 180
+PC+W Y P
Sbjct: 273 MPCIWCYLP 281
>SB_38999| Best HMM Match : Transp_Tc5_C (HMM E-Value=6.5)
Length = 111
Score = 43.6 bits (98), Expect = 1e-04
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 124 SAEACVDYASCMCCVKALFYH 144
+A+ C+DY +CMCC KALFYH
Sbjct: 26 AADRCIDYCTCMCCAKALFYH 46
>SB_35285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 34.3 bits (75), Expect = 0.077
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 129 VDYASCMCCVKALFYH 144
+D +CMCCV+ALFYH
Sbjct: 481 IDVCTCMCCVQALFYH 496
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 110 RPLPSRWLCGSCLCSAEACVDYASCMCC 137
RP P W CG+C+ +A D +C+ C
Sbjct: 1722 RPPPGSWECGTCMIQNKA--DVTTCVAC 1747
>SB_12521| Best HMM Match : Sprouty (HMM E-Value=0.48)
Length = 314
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 121 CLCSAEACVDYASCMCCVK 139
C + E+ VD A+CMCCVK
Sbjct: 152 CGRTVESLVDTATCMCCVK 170
>SB_17346| Best HMM Match : PHD (HMM E-Value=2.1e-09)
Length = 238
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 93 IVCETCGRCRCEQCAR--PRPLPSRWLCGSCLCSAEACVDYASC 134
+ CE CGR C R P + WLC C+ A C
Sbjct: 189 VQCEACGRWYHCACVRVPPTAVHKEWLCELCVNKAHITSSRGPC 232
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 93 IVCETCGRCRCEQCARPRPLPS-RWLCGSCLCSAEACVDYASC 134
+ C+ C ++C +P +WLC CL S VD C
Sbjct: 275 LFCDMCNLAVHQECYGVPYIPEGQWLCRRCLQSPSRVVDCVLC 317
>SB_22282| Best HMM Match : 7tm_2 (HMM E-Value=9.5e-09)
Length = 712
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 91 DSIVCETCGRCRCEQCARPRPLPSRWLCGSCLCSA--EACVDY 131
+S+ C GRC Q RP PS+ C LCS+ + C DY
Sbjct: 60 ESLSC--AGRCGRTQDRMARPSPSKCYCDD-LCSSLGDCCYDY 99
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 53 RTH-VSPAAAHAGAHQPLKPVTTQPXXXXXXXXXXXXXXDSIVCETCGRCRCEQCARPRP 111
RTH V+P A+ G + + T QP + C TC C +CA
Sbjct: 179 RTHCVTPLASQTGPDREEEQSTGQPPDLSRCSTHTNEEF-AFYCHTCSTLVCRECAVEHE 237
Query: 112 LPS 114
PS
Sbjct: 238 KPS 240
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 99 GRCRCEQCARPRPLPSRWLCGSC-LCSAEACVDYASCMCCVKA 140
G C C QC R ++ C C C C C+ CV A
Sbjct: 478 GTCTCGQCTCTRKYSGKY-CEECPSCEGGICRRSEDCLKCVTA 519
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 91 DSIVCETCGRCRCEQCARPRPLPSRWLCGSCLCSAEACVDYASCMCC 137
D++V + C +C C C + + G+C C A V +C C
Sbjct: 1218 DAVVAKNCAKCECSACGAVTSVCNH-TNGACQCKAN--VIGPNCSTC 1261
>SB_31348| Best HMM Match : ERM (HMM E-Value=0)
Length = 665
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 91 DSIVCETCGRCRCEQCARPRPLPSR-WLCGSCLCSAEACVDYASCM 135
D C+ CG CR R R P + W S E V + +CM
Sbjct: 556 DPYHCDKCGVCRINHSQRSRATPLKSWFLAE--KSGEVIVAHCNCM 599
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.326 0.137 0.497
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,579,374
Number of Sequences: 59808
Number of extensions: 172524
Number of successful extensions: 680
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 671
Number of HSP's gapped (non-prelim): 16
length of query: 213
length of database: 16,821,457
effective HSP length: 79
effective length of query: 134
effective length of database: 12,096,625
effective search space: 1620947750
effective search space used: 1620947750
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -