Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001265-TA|BGIBMGA001265-PA|IPR009000|Translation factor,
IPR000178|Initiation factor 2, IPR000795|Protein synthesis factor,
GTP-binding, IPR005225|Small GTP-binding protein domain,
IPR004161|Elongation factor Tu, domain 2
(1143 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 610 e-175
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 109 2e-24
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 2e-06
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 50 2e-06
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 48 7e-06
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 45 5e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 44 2e-04
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 44 2e-04
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 43 3e-04
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 38 0.006
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 37 0.014
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 37 0.014
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 36 0.024
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 34 0.13
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 33 0.17
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 32 0.40
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 32 0.53
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 32 0.53
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 32 0.53
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 32 0.53
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 31 0.69
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 31 0.69
SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces po... 31 0.92
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.92
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 30 1.6
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 30 1.6
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 30 1.6
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 1.6
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 30 2.1
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 30 2.1
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 29 2.8
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 29 2.8
SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 29 2.8
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 29 3.7
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 29 4.9
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 29 4.9
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 29 4.9
SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces p... 29 4.9
SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr 1... 29 4.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 6.5
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 28 6.5
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 28 8.6
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 28 8.6
>SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1079
Score = 610 bits (1506), Expect = e-175
Identities = 343/747 (45%), Positives = 464/747 (62%), Gaps = 34/747 (4%)
Query: 385 KQKAEKARAQALLESLKARGVEIG--STEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEK 442
KQK ++A AQ L+ + GV + S +K +P V K KS S + ++
Sbjct: 317 KQKEQQALAQRRLQQMLESGVRVAGLSNGEKKQKP---VYTNKKKSNRSGTSSISSSG-- 371
Query: 443 KVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQTSIQ 502
I+++ VD +K+S KD D+E E ETE E K+E+
Sbjct: 372 -----ILESSPATSISVDEPQKDS-----KD--DSEKVEKETEVERKEENEAEAEAVFDD 419
Query: 503 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREIVLKRLEKRRQ--DNEANRVN 560
+ +++ Q E+N
Sbjct: 420 WEAALEEPEVAENNEVVTEKKETDIKSDAVEHSIKDKEDSKTDKVDDIPQAAPAESNVSE 479
Query: 561 NPLRAAVVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPIENIKEQTKHVK 620
+ LR+ + C+LGHVDTGKTK+LD LRR+NVQ+GEAGGITQQIGAT PIE+IK++TK V
Sbjct: 480 SDLRSPICCILGHVDTGKTKLLDNLRRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVN 539
Query: 621 GVSEIAFKLPGLLIIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLKQ 680
++ + +PGLLIIDTPGHESF+NLRSRG+SLC+IAILV+DIMHGLE QTIESI LL+
Sbjct: 540 KKGKLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIRLLRD 599
Query: 681 KKTPFLVALNKIDRLYDWQSAQRKDIRDILKLQQPNTQLEFEKRSKDVMLQFAEQGLNAA 740
+KTPF+VALNK+DRLY W S + I+D L Q+ Q EF R + ++LQ EQGLNAA
Sbjct: 600 QKTPFVVALNKVDRLYGWHSIKDNAIQDSLSKQKKAIQREFRDRVESIILQLNEQGLNAA 659
Query: 741 LFYDNPDPRTYVSLVPTSAVTGEGMGNLLAMIIQACEGPLHKRLIFSQQLLATVLEVKAI 800
L+++N + YVSLVPTSA +GEG+ +L+A++I + + R+ + L TVLEVK I
Sbjct: 660 LYFENKNLGRYVSLVPTSAQSGEGVPDLVALLISLTQTRMSDRIKYITTLECTVLEVKVI 719
Query: 801 PGLGTTIDAILINGTLHEGDTMVLAGTDGPIVTQIRSLLMPQPMKELRVKNAYIEHKEVV 860
GLG TID IL NG LHEGD +VL G GPI+T +R+LL PQP+KE+RVK+AY+ HKE+
Sbjct: 720 EGLGATIDVILSNGVLHEGDRIVLCGMGGPIITTVRALLTPQPLKEMRVKSAYVHHKEIK 779
Query: 861 GAQGVXXXXXXXXXXXXGLNLLVAQKPDEVDVLKEEVAKELKSALSSIKLSERGVYVQAS 920
A GV G LLV D+ + L EE+ ++L++ L I S GV VQAS
Sbjct: 780 AAMGVKICANDLEKAVAGSRLLVVGPDDDEEDLAEEIMEDLENLLGRIDTSGIGVSVQAS 839
Query: 921 TLGSLEALLEFLKASKIPYSAIRIGPVVKRDVMKASAMLEHDSQYATILAFDVKIERDAQ 980
TLGSLEALLEFLK KIP +++ IGPV K+DVM+ + MLE +YA +L FDVK++RDA+
Sbjct: 840 TLGSLEALLEFLKQMKIPVASVNIGPVYKKDVMRCATMLEKAKEYALMLCFDVKVDRDAE 899
Query: 981 ELADQLGVKIFAADIIYHLFDKFTAYREELKQKKREEFKHIAVFPCKLKILPQFVFNSRD 1040
+LA+QLGVKIF+A++IYHLFD FTA+++++ ++KREE +AVFPC LK + FN RD
Sbjct: 900 DLAEQLGVKIFSANVIYHLFDAFTAHQKKILEQKREESSDVAVFPCVLKTVA--AFNKRD 957
Query: 1041 PIVAGIMVEAGVVKEGTPIC----VPSKE--FVESGIVTSIEVNHKQVETARKGQE---V 1091
PI+ G+ V GV++ TPI +P+ E +E G V S+E+NHK V+ +KGQ V
Sbjct: 958 PIILGVDVVEGVLRINTPIVAVKQLPNGEPQIIELGRVASLEMNHKPVDKVKKGQAGAGV 1017
Query: 1092 CIKIEPIPGESPEMFGRHFDETDMLVS 1118
+K+E S +FGR E+D L S
Sbjct: 1018 AMKLE--SSGSQILFGRQVTESDALYS 1042
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 109 bits (263), Expect = 2e-24
Identities = 149/586 (25%), Positives = 252/586 (43%), Gaps = 97/586 (16%)
Query: 560 NNPLRAAVVCVLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPIENIKEQTKHV 619
+ PLR VV ++GHVD GKT +LD R++ + E GGITQ+IGA VP +
Sbjct: 166 SGPLRPPVVTLMGHVDHGKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFD--------- 216
Query: 620 KGVSEIAFKLPGLLIIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLK 679
KG I F +DTPGH +F +R RG+++ DI +LVV G++ QT+E+I +
Sbjct: 217 KGSKFITF-------LDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIKHI- 268
Query: 680 QKKTPFLVALNKIDRLYDWQSAQRKDIRDILKLQQPNTQLEFEKRSKDVMLQFAEQGLNA 739
QSA + + K +P T + + EQ LN
Sbjct: 269 -------------------QSADVPVVVALTKSDRPGTPIH----------KIYEQLLNN 299
Query: 740 ALFYDNPDPRTYVSLVPTSAVTGEGMGNLLAMIIQACEGPLHKRLIFSQQLLATVLEVKA 799
+ + T + +P SA TG+G+ L A I+ E + R ++E
Sbjct: 300 GIQVEALGGETQI--IPISAKTGKGIPELEAAILTLAE-IMEIRASPRDPFQGWIVESSV 356
Query: 800 IPGLGTTIDAILINGTLHEGDTMVLAGTDGPIVT-------QIRSLLMPQPM-----KEL 847
G+G++ ++ GT+ +G +V + + + I+ +L Q K+L
Sbjct: 357 TKGVGSSATVVVKRGTVKKGMYLVAGKSWCKVRSLVDVNKKSIKQVLPGQAAQVYGWKDL 416
Query: 848 RVKN--AYIEHKEVVGAQGVXXXXXXXXXXXXGLNLLVAQKPDEVDVLKEEVAKELKSAL 905
+ AY E K A+ + L +Q V L + +
Sbjct: 417 PIAGDLAY-EVKSESEAKRILSDIYRQSNEQNFYELAESQNEQRVSALAAKKSGPAAIQE 475
Query: 906 SSIKLSERGVYVQASTLGSLEALLEFLKA-------SKIPYSAIRIGPVVKRDVMKASAM 958
+ + + GS+EAL ++LK S++ Y+ + GPV + D+ +A
Sbjct: 476 ETSVSKSFNIIAKCEDTGSMEALSDYLKPLQFGKVKSRVLYTGV--GPVTETDIERA--- 530
Query: 959 LEHDSQYATILAFDVKIERDAQELADQLGVKIFAADIIYHLFD---KFTAYR--EELKQK 1013
++ A I++F V + + LA++ VK+ ++IYHL D K A R L Q+
Sbjct: 531 ---ETSDAIIISFGVSVPKATFRLAEKHNVKLLFHNVIYHLMDDVRKLFALRLPPILVQR 587
Query: 1014 KREEFKHIAVFPCKLKILPQFVFNSRDPIVAGIMVEAGVVKEGTPI-CVPSKEFVESGIV 1072
E A+F K K + V + VAG V G +++ I V + + + SG +
Sbjct: 588 VTGEAIISAIFDIKAK---RAVVH-----VAGCRVTNGTIEKSHKIRLVRNDKIIWSGEI 639
Query: 1073 TSIEVNHKQVETARKGQEVCIKI----EPIPGESPEMFGRHFDETD 1114
S++ ++V + +KG+E I + E + G+ + F + D
Sbjct: 640 DSLKHLKEEVTSIKKGRECGILLKNFDEIVTGDKLQTFVEEYKPPD 685
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 568 VCVLGHVDTGKTKILDKLRRTNVQDGEAGGI-TQQIGATNVPIENIKEQTKHVKGVSEIA 626
V ++ H+D GKT + +K+ G + T +P E + T + +S
Sbjct: 31 VGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAIS-FT 89
Query: 627 FKLPGLLIIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLKQKKTPFL 686
++ + +IDTPGH F+ R ++ D A+ ++D G+E QT ++ P +
Sbjct: 90 WRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQATKRGIPKV 149
Query: 687 VALNKIDRL 695
+ +NK+DR+
Sbjct: 150 IFVNKMDRV 158
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 49.6 bits (113), Expect = 2e-06
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 570 VLGHVDTGKTKILDKLRRTN-VQDGEAGGITQQIGATNVPIEN---IKEQT-----KHVK 620
+L HVD GKT + D L +N + + G + + I +K K +
Sbjct: 24 LLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFKVIS 83
Query: 621 GVSEIAFKLPGLL-IIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLK 679
E + L+ +ID+PGH FS+ S S LCD A ++VD + G+ QTI +
Sbjct: 84 QNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQAW 143
Query: 680 QKKTPFLVALNKIDRL 695
+ ++ +NK+DRL
Sbjct: 144 IDRIKVILVINKMDRL 159
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 48.0 bits (109), Expect = 7e-06
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 597 GITQQIGATNVPIENIKEQTKHVKGVSEIAFKLPGLLIIDTPGHESFSNLRSRGSSLCDI 656
GIT Q AT+ E +Q + + K + IIDTPGH F+ R + D
Sbjct: 112 GITIQSAATHCTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDG 171
Query: 657 AILVVDIMHGLEQQTIESINLLKQKKTPFLVALNKIDRL--YDWQSAQRKDIRDILKLQQ 714
A+LV+ + G++ QTI +++ P + +NK+DR+ W+ Q+ I LK+
Sbjct: 172 AVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGADPWKVIQQ--INTKLKIPA 229
Query: 715 PNTQLEFEKRSK 726
Q+ + K
Sbjct: 230 AAVQIPIGQEDK 241
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 45.2 bits (102), Expect = 5e-05
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 570 VLGHVDTGKTKILDKL-----RRTNVQDGEAGGITQQIGATNVPIENIKEQTKHVKGVSE 624
V GH+ GK+ +LD L T + T + +IK T VS+
Sbjct: 145 VAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKS-TPLTLAVSD 203
Query: 625 IAFKLPGLLIIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLKQKKTP 684
+ K IDTPGH F + + ++ D +LVVD++ G+ T I P
Sbjct: 204 MKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAILHDMP 263
Query: 685 FLVALNKIDRL 695
++ LNK+DRL
Sbjct: 264 IVLVLNKVDRL 274
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 557 NRVNNPLRAAVVCVLGHVDTGKTKILDKL--RRTNVQDGEAGGIT--------QQIGAT- 605
N + P + V+ HVD GK+ + D L + + +AG Q+ G T
Sbjct: 11 NLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTI 70
Query: 606 -NVPIENIKEQTKH-VKGVSEIAFKLPGLL-IIDTPGHESFSNLRSRGSSLCDIAILVVD 662
+ I E T +K + E A L+ +ID+PGH FS+ + + D A++VVD
Sbjct: 71 KSTAISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVD 130
Query: 663 IMHGLEQQTIESINLLKQKKTPFLVALNKIDR-LYDWQSAQRK 704
+ G+ QT + ++ +V +NK+DR L + Q +Q +
Sbjct: 131 TIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEE 173
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 557 NRVNNPLRAAVVCVLGHVDTGKTKILDKL--RRTNVQDGEAGGIT--------QQIGAT- 605
N + P + V+ HVD GK+ + D L + + +AG Q+ G T
Sbjct: 11 NLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTI 70
Query: 606 -NVPIENIKEQTKH-VKGVSEIAFKLPGLL-IIDTPGHESFSNLRSRGSSLCDIAILVVD 662
+ I E T +K + E A L+ +ID+PGH FS+ + + D A++VVD
Sbjct: 71 KSTAISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVD 130
Query: 663 IMHGLEQQTIESINLLKQKKTPFLVALNKIDR-LYDWQSAQRK 704
+ G+ QT + ++ +V +NK+DR L + Q +Q +
Sbjct: 131 TIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEE 173
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 5/127 (3%)
Query: 570 VLGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPIENIKEQTKHVKGVSEIAF-- 627
V+ H+D GK+ + D + + E Q + + +E + T + S I +
Sbjct: 63 VIAHIDHGKSTLSDCILKLTGVINEHNFRNQFLD--KLEVERRRGITVKAQTCSMIYYYH 120
Query: 628 -KLPGLLIIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLKQKKTPFL 686
+ L +IDTPGH F + C+ IL+VD G++ QT+ + + + +
Sbjct: 121 GQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAFSQNLVII 180
Query: 687 VALNKID 693
LNK+D
Sbjct: 181 PVLNKVD 187
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 38.3 bits (85), Expect = 0.006
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 571 LGHVDTGKTKILDKLRRTNVQDGEAGGIT-QQIG-ATNVPIENIKEQTKHVKGVSEIAFK 628
+GHVD GKT + + + G+A + QI A I + HV+ E A +
Sbjct: 59 IGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVE--YETANR 116
Query: 629 LPGLLIIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQQTIESINLLKQKKT-PFLV 687
+D PGH + G++ D AI+VV G QT E + L +Q +V
Sbjct: 117 --HYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQIVV 174
Query: 688 ALNKIDRLY-DWQSAQRKDIRDIL 710
+NK+D + D ++R++L
Sbjct: 175 YINKVDMVEPDMIELVEMEMRELL 198
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Query: 405 VEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKK 464
VE + +PP+ R GK S L V A EL + +EK
Sbjct: 1270 VEEEPRQAEPPKRALRSNSGKAASNKRTTRNSMKTHSAMDTLTAVAALDAELDNMSNEKA 1329
Query: 465 ESEVDLVKDSWDAESSEDETEPETKQESVTPKSQTSI 501
+ EVD VK +E+ E EP T+ S+ + T++
Sbjct: 1330 KEEVDHVK----SENGESVNEPNTEDLSLETEENTTV 1362
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 37.1 bits (82), Expect = 0.014
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 560 NNPLRAAVVCVLGHVDTGKTKILDKL---------RRTNVQDGEAGGITQQIGATNVPIE 610
+NP + V GHVD+GK+ +L ++ R EA + + ++
Sbjct: 172 SNPKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLD 231
Query: 611 NIKEQTKH--VKGVSEIAFKLPGLL--IIDTPGHESFSNLRSRGSSLCDIAILVVDIMHG 666
+E+ V+ F+ + I D PGH F + G+S D A+LVVD
Sbjct: 232 TTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQN 291
Query: 667 ------LEQ-QTIESINLLKQKK-TPFLVALNKIDRLYDWQSAQRKDIRDIL 710
LE QT E LL+ + +V++NK+D L W + ++I++I+
Sbjct: 292 NFERGFLENGQTREHAYLLRALGISEIVVSVNKLD-LMSWSEDRFQEIKNIV 342
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 440 EEKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQ 498
EE+ E E + + E + +SE +ESEV++ K A S + E++ E+ +E +S+
Sbjct: 39 EEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESE 97
Score = 31.5 bits (68), Expect = 0.69
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 440 EEKKVEL---EIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPK 496
EE +VE+ + V A ++ +S ++E E + +DS ++ SE E+E E++ E +
Sbjct: 63 EESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESES 122
Query: 497 SQTS 500
+ S
Sbjct: 123 EEES 126
Score = 29.5 bits (63), Expect = 2.8
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 420 RVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEVDLVK------D 473
R+ +LK Q + EE+ ++ +EE + SE+ E EV K D
Sbjct: 24 RLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESE---SEESEVEVPKKKAVAASED 80
Query: 474 S-WDAESSEDETEPETKQES-VTPKSQT 499
S D+ESSE+E E E++++S V+ +S++
Sbjct: 81 SESDSESSEEEEETESEEDSEVSDESES 108
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 4/139 (2%)
Query: 419 TRVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAE 478
T VK ++ + A P + KK+ E ++ K D K+S+ K++ A
Sbjct: 7 TSVKKSVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSK----KEAKRAS 62
Query: 479 SSEDETEPETKQESVTPKSQTSIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 538
S E + KQ+ K ++S +
Sbjct: 63 SPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSES 122
Query: 539 XREIVLKRLEKRRQDNEAN 557
E+++K EK+ +E++
Sbjct: 123 EEEVIVKTEEKKESSSESS 141
Score = 31.5 bits (68), Expect = 0.69
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 421 VKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESS 480
VK + K S+ + + EE++ + ++ K+E SE SE + S ++E
Sbjct: 128 VKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEE 187
Query: 481 EDETE-PETKQESVTPKSQTS 500
E+ E E K+E + S S
Sbjct: 188 EEVVEKTEEKKEGSSESSSDS 208
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 409 STEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEV 468
S ++ + G KP K K + A + K ++ +K+E + E + V
Sbjct: 12 SVKETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSV 71
Query: 469 DLVKDSWDAESSEDETEPE---TKQESVTPKSQTS 500
K S E S E+E E ++ ES + +S++S
Sbjct: 72 KKQKKSKKKEESSSESESESSSSESESSSSESESS 106
Score = 29.5 bits (63), Expect = 2.8
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 385 KQKAEKARAQALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQ---DAPLTPMEE 441
K K E RA + S K+ + S +K+ + + +S+ S ++ + E
Sbjct: 53 KSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESSSSESES 112
Query: 442 KKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQTS 500
E ++++E + K + EKKES + S E E + E K+ES + S S
Sbjct: 113 SSSESSSSESEEEVIVKTE-EKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSES 170
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 383 TPKQKAEKARAQALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEK 442
T ++K + + + ES + + EKK + + +S+ + + EE+
Sbjct: 130 TEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEE 189
Query: 443 KVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSED-ETEPETKQE 491
VE + K+E + S+ ES D +S D++SS D E+E ++ E
Sbjct: 190 VVEK--TEEKKEGSSESSSDS-ESSSDSSSESGDSDSSSDSESESSSEDE 236
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 386 QKAEKARAQALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVE 445
+K E++ +++ ES + E S+E + + + S S++ + EEKK
Sbjct: 78 KKKEESSSESESESSSSES-ESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKES 136
Query: 446 LEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPET 488
+ E ++ ++ K E +ESS E+E E+
Sbjct: 137 SSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESES 179
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 411 EKKPPRPGTRVKPGKLKSQMS-QDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEVD 469
E K P P P + S+ S ++ PL+P +++ V ++ E+LQ+ + +++ E+D
Sbjct: 613 ESKSPHPNYSRTPHETYSKASSKNVPLSPPKQRVVNEHALNIMSEKLQRTNLKEQTPEMD 672
Query: 470 LVKDSWDAESSEDETEP 486
+ S + S + P
Sbjct: 673 IENSSQNLPFSPMKISP 689
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 32.3 bits (70), Expect = 0.40
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 384 PKQKAEKARAQALLESLKARGVEIGSTEKKPPRPGTRV--KPGKLKSQMSQDAPLTPME- 440
P++K+ +A+ L K + + +K + V K L+ S+D + +
Sbjct: 2 PRKKSAAKKAREALVQKKVINSNVPTDKKSIDQLQENVTSKSHLLEESSSEDEEINSFQI 61
Query: 441 -EKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQT 499
E+ + + K+EELQK++++ E + V ESS +E E ++ E VTP+
Sbjct: 62 NEEYAKRFEHNKKREELQKLEAKYGEQMANGVDGEGSDESSSEE-EEDSDGELVTPEVDA 120
Query: 500 SI 501
+I
Sbjct: 121 AI 122
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 31.9 bits (69), Expect = 0.53
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 568 VCVLGHVDTGKTKILDKL--------RRTNVQDGEAGGITQQIGATNVPIENIKEQTKHV 619
V V+GHVD+GK+ L +RT ++ E G+ K + +
Sbjct: 10 VVVIGHVDSGKSTTTGHLIYKCGGIDKRT-IEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 620 KGVS-EIA---FKLP--GLLIIDTPGHESFSNLRSRGSSLCDIAILVV-----DIMHGLE 668
+G++ +IA F+ P + +ID PGH F G+S D AIL++ + G+
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 669 Q--QTIESINLLKQKKT-PFLVALNKIDRLYDWQSAQRKDI 706
+ QT E L +VA+NK+D W A+ ++I
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMDTT-GWSQARFEEI 168
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 31.9 bits (69), Expect = 0.53
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 633 LIIDTPGHESFSNLRSRGSSLCD--------IAILVVDIMHGLEQQT-----IESINLLK 679
++IDTPG + GS +CD VVD T + + ++L
Sbjct: 108 ILIDTPGQIEIFQWSASGSIICDTLASSWPTCIAYVVDTPRATSTSTWMSSMLYACSMLY 167
Query: 680 QKKTPFLVALNKIDRLYDWQSAQRKDIRDILKLQQPNTQLEFEKRSKDVMLQFAEQGLNA 739
+ K P ++ NK D + D + A +K + D + QQ T+ E S+ + +N+
Sbjct: 168 KAKLPLIIVYNKCD-VQDSEFA-KKWMTDFEEFQQAVTKDE-GMSSEGATSGYMGSLVNS 224
Query: 740 ALFYDNPDPRTYVSLVPTSAVTGEGMGNLLAMI 772
R ++ V S+VTGEGM + L +
Sbjct: 225 MSLMLEEFYR-HLDFVSCSSVTGEGMDDFLEAV 256
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 31.9 bits (69), Expect = 0.53
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 568 VCVLGHVDTGKTKILDKL--------RRTNVQDGEAGGITQQIGATNVPIENIKEQTKHV 619
V V+GHVD+GK+ L +RT ++ E G+ K + +
Sbjct: 10 VVVIGHVDSGKSTTTGHLIYKCGGIDKRT-IEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 620 KGVS-EIA---FKLP--GLLIIDTPGHESFSNLRSRGSSLCDIAILVV-----DIMHGLE 668
+G++ +IA F+ P + +ID PGH F G+S D AIL++ + G+
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGIS 128
Query: 669 Q--QTIESINLLKQKKT-PFLVALNKIDRLYDWQSAQRKDI 706
+ QT E L +VA+NK+D W A+ ++I
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMDTT-GWSQARFEEI 168
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 31.9 bits (69), Expect = 0.53
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 634 IIDTPGHESFSNLRSRGSSLCDIAILVV-----DIMHGLEQ--QTIESINLLK-QKKTPF 685
++D PGH+ + G+S DI +LV+ + G E+ QT E L + Q
Sbjct: 320 LLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHL 379
Query: 686 LVALNKIDR-LYDWQSAQRKDIRDILKL 712
+V +NK+D W + K+ D L +
Sbjct: 380 VVVINKMDEPSVQWSEERYKECVDKLSM 407
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 663 IMHGLEQQT-IESINLLKQKKTPFLVALNKI--DRLYDWQSAQRKDIRDILKLQQPNTQL 719
+ H L T IE ++ QK+ F + K DR YD++ Q+K ++ + +++
Sbjct: 730 VYHRLYDNTVIERETIICQKENSFYIDTVKSFRDRRYDFKGLQKKWVKQLAAIKEKGGLA 789
Query: 720 EFEKRSKDVML 730
E E+ K V+L
Sbjct: 790 EIEEAKKMVVL 800
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 31.5 bits (68), Expect = 0.69
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 568 VCVLGHVDTGKTKILDKL--------RRTNVQDGEAGGITQQIGATNVPIENIKEQTKHV 619
V V+GHVD+GK+ L +RT ++ E G+ K + +
Sbjct: 10 VVVIGHVDSGKSTTTGHLIYKCGGIDKRT-IEKFEKEATELGKGSFKYAWVLDKLKAERE 68
Query: 620 KGVS-EIA---FKLP--GLLIIDTPGHESFSNLRSRGSSLCDIAILVV-----DIMHGLE 668
+G++ +IA F+ P + +ID PGH F G+S D A+L++ + G+
Sbjct: 69 RGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGIS 128
Query: 669 Q--QTIESINLLKQKKT-PFLVALNKIDRLYDWQSAQRKDI 706
+ QT E L +VA+NK+D W A+ ++I
Sbjct: 129 KDGQTREHALLAYTLGVKQLIVAVNKMDTT-GWSQARFEEI 168
>SPCC162.12 ||SPCC1753.06c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 451
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 417 PGTRVKPGKLKSQMSQDAPLTPMEEKKVEL-EIVDAKQEELQKVDSEKKESEVDLVKDSW 475
P T + L ++ P T +++ + EL ++ + QK+ ++ S+ D+V+D
Sbjct: 255 PPTLSRGNSLSLLANRKVPSTNVKKSQAELYDLGSSTSRTQQKLLIQRASSKFDIVEDDM 314
Query: 476 DAESSEDETEPETK 489
D S+ + P TK
Sbjct: 315 DTNPSKRFSNPHTK 328
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/99 (19%), Positives = 45/99 (45%)
Query: 394 QALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQ 453
+ L++ ++ E+ + + P G+ ++ SQ EK+ E EI+ A+
Sbjct: 1538 EGLVQQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARS 1597
Query: 454 EELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQES 492
E + + + K+E E L + S + E++ + + + +
Sbjct: 1598 ELVAEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENT 1636
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 635 IDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEQ-QTIESINLLKQKKTPFLVAL-NKI 692
+D PGH+ G+++ D A+L++ Q QT E + ++ + ++ L NK+
Sbjct: 113 VDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIIILQNKV 172
Query: 693 DRLYDWQSAQRKDIRDILK 711
D + +SA + + ILK
Sbjct: 173 DLIR--ESAAEEHYQSILK 189
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 390 KARAQALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVELEIV 449
K +++ LE+ ++ VEI + E KP P + + K + L EE K+ +
Sbjct: 130 KEKSEKPLET--SQKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKEE-KISRNL- 185
Query: 450 DAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQTS 500
+ + V + + ++ V +S + E+ ++ SV+P SQ +
Sbjct: 186 RSSSRSISPVTEQPQSPKIQPVIPEKKEKSEKKESSMTLRKRSVSPSSQNT 236
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 438 PMEEKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKS 497
P+ EK VE +++D + E++ EK S DLV D E D E K +V KS
Sbjct: 59 PILEKVVE-KVLDTLKAEVE----EKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVINKS 113
Query: 498 QTSI 501
TS+
Sbjct: 114 ITSL 117
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 402 ARGVEIGSTEKKPPRP---GTRVKPGKLKSQMSQDAPLTPMEEKKVELEI---VDAKQEE 455
A V+I ST P + K+ + Q +P+ E + I D + E
Sbjct: 25 AASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDGNENE 84
Query: 456 LQKVDS-EKKESEVDLVKDSWDAESSEDETEPETKQE 491
+ V++ +KKE E ++ ++ +A+++E+E E E E
Sbjct: 85 VDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDE 121
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 440 EEKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQ 490
+E E +AK +E++ S K++ L + S AES +E E ETKQ
Sbjct: 16 DEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQ 66
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 439 MEEKKVELEIVDAKQE--ELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPK 496
+ E + +L+ +D KQ ELQ DS++ E +++L K ++ S E E E Q +
Sbjct: 73 LSEAETKLKRLDEKQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKMEEL 132
Query: 497 SQTSIQ 502
+ S++
Sbjct: 133 TVESME 138
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 440 EEKKVELEIVDAKQEELQKV-DSEKKESEVDLVKDSWDAESSEDETE 485
EE+K E++ + +KQE +V +E+ V+ KD+ E E+ TE
Sbjct: 4 EEQKEEIKDISSKQENSSEVPKAEEAGKVVESQKDTTSEEKKEETTE 50
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 450 DAKQEELQKVDSEKKES-EVDLVKDSWDAESSEDETEPETKQESVTPKSQ 498
+ ++EE++ + S+++ S EV +++ S+ +T E K+E T K +
Sbjct: 4 EEQKEEIKDISSKQENSSEVPKAEEAGKVVESQKDTTSEEKKEETTEKKE 53
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/70 (24%), Positives = 30/70 (42%)
Query: 417 PGTRVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWD 476
P T + +LK+Q + + + + K ++LQ VD S DL K W+
Sbjct: 341 PPTPAQIHQLKAQQQHLQRQSKQMSEPAPINMKSNKDQQLQYVDFRGVGSGADLQKQQWN 400
Query: 477 AESSEDETEP 486
+S + +P
Sbjct: 401 KSTSAEGLQP 410
>SPCC364.01 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 320
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 388 AEKARAQALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVELE 447
+E+ ++++++ + +G EK+P R + V+ KLK++ Q A ++K+
Sbjct: 2 SEEIITESIVKNFGSAETSVG--EKQPKRKRSEVRAEKLKARKLQKAAEIVQKQKENRKI 59
Query: 448 IVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDE 483
+ D + L K SE + + S++ SE++
Sbjct: 60 LKDVSLKRLSKSLDRSLPSENTIDQISFNHAMSEED 95
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 440 EEKKVELEIVDAKQEE-LQKVDSEKKESEVDLVKDSWDAESSED-ETEPETKQESVTPK 496
++K E +++ K++E + VD + E +V++ + E+ ED E E K+ TPK
Sbjct: 32 QDKNPEENVMNEKEDEDVDAVDEKSGEEDVEMDTMEDENENDEDTEQTSEKKETEETPK 90
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 455 ELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQTS 500
E ++ ++ VDL +D + E EDE E KQE + KS+ S
Sbjct: 199 EAMTEEASDEDESVDLEEDE-EEEDEEDEEGDEEKQEPPSKKSKKS 243
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 28.7 bits (61), Expect = 4.9
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 733 AEQGLNAALFYDNPDPRTYVSLVPTSAVTGEGMGNLLAMIIQACEGPLHKRLIFSQQLLA 792
A G A++YD P PRT L A+T G+GNL + A + + L+ + A
Sbjct: 429 AGTGSMIAIYYDTPIPRTMGFL----ALTAVGIGNLFQPNLIAIQASVPPALM-ATSCSA 483
Query: 793 TVLEVKAIPGLGTTIDAILINGTLHEGDTMVLAGTD 828
+L +G +I A++ + L T +L GT+
Sbjct: 484 FMLLRNMGASVGISIGAVIYDQQL----TTLLKGTE 515
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 651 SSLCDIAILVVDIMHGLEQQTIESINLLKQKKTPFLVAL 689
+ + D+ +L++D G E +T+E +N+L P ++ +
Sbjct: 136 AKIADLVLLLIDANFGFEMETMEFLNILAPHGMPRIMGV 174
>SPBC19C7.09c |uve1|uvde|endonuclease Uve1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 441 EKKVELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQ 498
E + E +I A ++ QK + E E EVD + S ESS DE EP ++ TP S+
Sbjct: 155 ESESEEQISKATKKVKQKEEEEYVE-EVD--EKSLKNESSSDEFEPVVPEQLETPISK 209
>SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 386
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 454 EELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQTS 500
+E+++V S + E+D + D + E+E E E + ES +P+ +TS
Sbjct: 323 DEIREVFSTRGRGELDELDDMEELTDEEEEDE-EEEAESQSPEPETS 368
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.3 bits (60), Expect = 6.5
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Query: 384 PKQKAEKARAQALLESLKARGVEIGSTEKKPPRPGTRVKPGKLKSQMSQDAPLTPMEEKK 443
P +K++KA+A A + VE E+ +P V+ K S+ + +P +
Sbjct: 77 PSKKSKKAKANAFEAFADEQSVE-EEEEEDSEKP---VRKNKKSSKKA--SPKNAFDALA 130
Query: 444 VELEIVDAKQEELQKVDSEKKESEVDLVKDSWDAESSEDETEPETKQESVTPKSQ 498
+++ + +EE + + KK+ + KD + + E K + KS+
Sbjct: 131 DDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSK 185
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 13/68 (19%)
Query: 1017 EFKHIAVFPCKLKILPQF-----------VFNSRDPIVAGIMVEAGVVKEGTPICVPSKE 1065
EFK IA C++ +P V+ R+ I+ G +V V E T +C+PS
Sbjct: 426 EFKDIAELFCRIPYMPSMKDLVSLSISGNVYFGRNVILKGNIVI--VASENTILCIPSNA 483
Query: 1066 FVESGIVT 1073
+E+ +VT
Sbjct: 484 VLENCVVT 491
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 40 EDVKEVTKNLKNVSVTNKSQKKKADVTSEDESDSELEVXXXXXXXXXXXXSVFSLLEIEN 99
E ++ TK ++N+ +K +KKK + +S+D E S L+ E
Sbjct: 68 ETIESDTKEVQNIKPKSKKKKKKLNDSSDDIEGKYFEELLAEEDEEKDKDSA-GLINDEE 126
Query: 100 DVSPPEAPMSSE 111
D SP + + E
Sbjct: 127 DKSPAKQSVLEE 138
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/77 (22%), Positives = 34/77 (44%)
Query: 413 KPPRPGTRVKPGKLKSQMSQDAPLTPMEEKKVELEIVDAKQEELQKVDSEKKESEVDLVK 472
K +P + K +++ +++PL EE L++ D + +K+D +++ K
Sbjct: 668 KVNKPEMKEGQKKAEARKKKESPLEATEETNPWLQVPDQRTSSAKKLDKNSSKADKKNHK 727
Query: 473 DSWDAESSEDETEPETK 489
D +S E E K
Sbjct: 728 LKMDKVASLQELVEEPK 744
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.130 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,738,686
Number of Sequences: 5004
Number of extensions: 139796
Number of successful extensions: 587
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 481
Number of HSP's gapped (non-prelim): 103
length of query: 1143
length of database: 2,362,478
effective HSP length: 81
effective length of query: 1062
effective length of database: 1,957,154
effective search space: 2078497548
effective search space used: 2078497548
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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