GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001264-TA|BGIBMGA001264-PA|IPR009072|Histone-fold
         (254 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    25   2.1  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   8.6  

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 111 LEYLPPNSPPGAGSDGVKYATQEIFLP 137
           L  + P  P GAG+ G +++ Q+  LP
Sbjct: 194 LSNIQPTPPKGAGATGTQHSDQQQELP 220


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 111 LEYLPPNSPPGAGSDGVKYATQE 133
           L  + P  P GAG+ G +++ Q+
Sbjct: 194 LSNIQPTPPKGAGATGTQHSDQQ 216


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,452
Number of Sequences: 2123
Number of extensions: 8442
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 254
length of database: 516,269
effective HSP length: 63
effective length of query: 191
effective length of database: 382,520
effective search space: 73061320
effective search space used: 73061320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)