Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001264-TA|BGIBMGA001264-PA|IPR009072|Histone-fold
(254 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015976-1|AAV36861.1| 308|Drosophila melanogaster RE72529p pro... 134 1e-31
AE014134-2124|AAN10793.1| 308|Drosophila melanogaster CG31866-P... 134 1e-31
BT001603-1|AAN71358.1| 339|Drosophila melanogaster RE30472p pro... 133 2e-31
AE014134-2127|AAN10796.1| 308|Drosophila melanogaster CG31865-P... 133 2e-31
AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA ... 29 8.2
>BT015976-1|AAV36861.1| 308|Drosophila melanogaster RE72529p
protein.
Length = 308
Score = 134 bits (324), Expect = 1e-31
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 1 MASDTLNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEF 60
M +D + + L LG+ +Y MK WFR + TKEEFD E+RK+L+ D++H HN+F
Sbjct: 1 MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQF 60
Query: 61 LLALLNKVEGLAETSITIA-QEKAXXXXXXXXXXXXXXXXXXXXNFEPVDILEYLPPNS- 118
LLALLNK++ A A Q + NFE D+L+++ ++
Sbjct: 61 LLALLNKIDAFAPLENPPAVQTSSSSGNRSKRRKRSSRTFAERLNFELSDVLDFVAEDNM 120
Query: 119 ----PP---GAGSD-------GVKYATQEIFLPDHALVVGRFMLAAWELGLEGXXXXXXX 164
PP G SD +Y QE+FLPD ++GRF++ AWE+GL
Sbjct: 121 QIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMGRFLIGAWEIGLVSVDDNVAE 180
Query: 165 XXXXXXQNFLKNVISAVLAQRKGYKTHGK-YFMYDIGGDMPNMWLRNS 211
Q LK+++SA++ +RK YKT G+ F YD+G + + LRN+
Sbjct: 181 YVAMAVQVLLKDLLSAIIKKRKHYKTSGEGNFYYDVGAPLRDPSLRNT 228
>AE014134-2124|AAN10793.1| 308|Drosophila melanogaster CG31866-PA
protein.
Length = 308
Score = 134 bits (324), Expect = 1e-31
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 1 MASDTLNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEF 60
M +D + + L LG+ +Y MK WFR + TKEEFD E+RK+L+ D++H HN+F
Sbjct: 1 MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQF 60
Query: 61 LLALLNKVEGLAETSITIA-QEKAXXXXXXXXXXXXXXXXXXXXNFEPVDILEYLPPNS- 118
LLALLNK++ A A Q + NFE D+L+++ ++
Sbjct: 61 LLALLNKIDAFAPLENPPAVQTSSSSGNRSKRRKRSSRTFAERLNFELSDVLDFVAEDNM 120
Query: 119 ----PP---GAGSD-------GVKYATQEIFLPDHALVVGRFMLAAWELGLEGXXXXXXX 164
PP G SD +Y QE+FLPD ++GRF++ AWE+GL
Sbjct: 121 QIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMGRFLIGAWEIGLVSVDDNVAE 180
Query: 165 XXXXXXQNFLKNVISAVLAQRKGYKTHGK-YFMYDIGGDMPNMWLRNS 211
Q LK+++SA++ +RK YKT G+ F YD+G + + LRN+
Sbjct: 181 YVAMAVQVLLKDLLSAIIKKRKHYKTSGEGNFYYDVGAPLRDPSLRNT 228
>BT001603-1|AAN71358.1| 339|Drosophila melanogaster RE30472p
protein.
Length = 339
Score = 133 bits (322), Expect = 2e-31
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 1 MASDTLNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEF 60
M +D + + L LG+ +Y MK WFR + TKEEFD E+RK+L+ D++H HN+F
Sbjct: 32 MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQF 91
Query: 61 LLALLNKVEGLAETSITIA-QEKAXXXXXXXXXXXXXXXXXXXXNFEPVDILEYLPPNS- 118
LLALLNK++ A A Q + NFE D+L+++ ++
Sbjct: 92 LLALLNKIDAFAPLENPPAVQTSSSSGNRSKGRKRSCRTFAERLNFELSDVLDFVAEDNM 151
Query: 119 ----PP---GAGSD-------GVKYATQEIFLPDHALVVGRFMLAAWELGLEGXXXXXXX 164
PP G SD +Y QE+FLPD ++GRF++ AWE+GL
Sbjct: 152 QIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMGRFLIGAWEIGLVSVDDNVAE 211
Query: 165 XXXXXXQNFLKNVISAVLAQRKGYKTHGK-YFMYDIGGDMPNMWLRNS 211
Q LK+++SA++ +RK YKT G+ F YD+G + + LRN+
Sbjct: 212 YVAMAVQVLLKDLLSAIIKKRKHYKTSGEGNFYYDVGAPLRDPSLRNT 259
>AE014134-2127|AAN10796.1| 308|Drosophila melanogaster CG31865-PA
protein.
Length = 308
Score = 133 bits (322), Expect = 2e-31
Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 1 MASDTLNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTKEEFDGEARKLLSNDQVHFHNEF 60
M +D + + L LG+ +Y MK WFR + TKEEFD E+RK+L+ D++H HN+F
Sbjct: 1 MLTDRVLATKEALVVALGDNWERYRANMKNWFRSRWTKEEFDAESRKILTPDKLHLHNQF 60
Query: 61 LLALLNKVEGLAETSITIA-QEKAXXXXXXXXXXXXXXXXXXXXNFEPVDILEYLPPNS- 118
LLALLNK++ A A Q + NFE D+L+++ ++
Sbjct: 61 LLALLNKIDAFAPLENPPAVQTSSSSGNRSKRRKRSCRTFAERLNFELSDVLDFVAEDNM 120
Query: 119 ----PP---GAGSD-------GVKYATQEIFLPDHALVVGRFMLAAWELGLEGXXXXXXX 164
PP G SD +Y QE+FLPD ++GRF++ AWE+GL
Sbjct: 121 QIIRPPTTIGIPSDQQQQQLQSQRYCAQELFLPDAGFIMGRFLIGAWEIGLVSVDDNVAE 180
Query: 165 XXXXXXQNFLKNVISAVLAQRKGYKTHGK-YFMYDIGGDMPNMWLRNS 211
Q LK+++SA++ +RK YKT G+ F YD+G + + LRN+
Sbjct: 181 YVAMAVQVLLKDLLSAIIKKRKHYKTSGEGNFYYDVGAPLRDPSLRNT 228
>AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA
protein.
Length = 3242
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 5 TLNIARRKLNEVLGEKSTKYFNQMKLWFRMKLTK--EEFDGEARKLLSNDQVHFHNEFLL 62
TLN+ +LNEV+G + + +L F M + K E + +A + + +H +
Sbjct: 1784 TLNMPIIELNEVIGRNGVREYTPWELKFEMGMEKVQSELEDDAEQQAMHMNIHSAETLEI 1843
Query: 63 ALLNKVEGL 71
L GL
Sbjct: 1844 TLSKTCLGL 1852
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.136 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,233,629
Number of Sequences: 52641
Number of extensions: 401404
Number of successful extensions: 767
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 759
Number of HSP's gapped (non-prelim): 5
length of query: 254
length of database: 24,830,863
effective HSP length: 83
effective length of query: 171
effective length of database: 20,461,660
effective search space: 3498943860
effective search space used: 3498943860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -