Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001263-TA|BGIBMGA001263-PA|IPR002559|Transposase, IS4
(294 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26635| Best HMM Match : DUF635 (HMM E-Value=0.018) 171 6e-43
SB_37754| Best HMM Match : HTH_5 (HMM E-Value=9.4) 134 8e-32
SB_49311| Best HMM Match : Transposase_11 (HMM E-Value=0.27) 115 4e-26
SB_8441| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 5e-26
SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 8e-24
SB_36174| Best HMM Match : Transposase_11 (HMM E-Value=0.00013) 105 3e-23
SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 1e-22
SB_4275| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_34969| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_462| Best HMM Match : RVT_1 (HMM E-Value=7.7e-25) 75 9e-14
SB_41414| Best HMM Match : DUF635 (HMM E-Value=0.0018) 72 6e-13
SB_46987| Best HMM Match : Sigma70_r4 (HMM E-Value=1.4) 71 1e-12
SB_21419| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_17229| Best HMM Match : DUF635 (HMM E-Value=0.25) 64 1e-10
SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06) 64 1e-10
SB_11462| Best HMM Match : UBA (HMM E-Value=1.3) 63 2e-10
SB_6884| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_13873| Best HMM Match : Transposase_11 (HMM E-Value=2.4) 61 9e-10
SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9) 61 1e-09
SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_13853| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-09
SB_21466| Best HMM Match : Xlink (HMM E-Value=1.2) 56 3e-08
SB_29291| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_21257| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_47884| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_9580| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_245| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_18706| Best HMM Match : Transposase_11 (HMM E-Value=0.44) 48 7e-06
SB_9923| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_6457| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_48458| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_36811| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=8.1) 42 5e-04
SB_36588| Best HMM Match : HEAT (HMM E-Value=6.9) 42 5e-04
SB_57291| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_45119| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_48179| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 8e-04
SB_52939| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_25595| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_11771| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_48180| Best HMM Match : Sigma70_r4 (HMM E-Value=8) 38 0.010
SB_9315| Best HMM Match : Transposase_11 (HMM E-Value=0.0014) 37 0.017
SB_17353| Best HMM Match : Transposase_11 (HMM E-Value=1.3) 36 0.030
SB_22894| Best HMM Match : Transposase_11 (HMM E-Value=0.0015) 36 0.039
SB_49933| Best HMM Match : Transposase_11 (HMM E-Value=0.00093) 36 0.052
SB_9921| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.052
SB_47954| Best HMM Match : Transposase_11 (HMM E-Value=0.0015) 36 0.052
SB_30507| Best HMM Match : Antimicrobial17 (HMM E-Value=1.4) 35 0.069
SB_13536| Best HMM Match : DUF1433 (HMM E-Value=2.6) 35 0.091
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_53426| Best HMM Match : THAP (HMM E-Value=0.00058) 33 0.21
SB_37435| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_52688| Best HMM Match : Gpi1 (HMM E-Value=1.8) 33 0.37
SB_46021| Best HMM Match : C1_1 (HMM E-Value=1.1) 33 0.37
SB_36456| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_25623| Best HMM Match : THAP (HMM E-Value=0.00058) 33 0.37
SB_17382| Best HMM Match : Gpi1 (HMM E-Value=2.6) 33 0.37
SB_59059| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_2792| Best HMM Match : Sod_Fe_N (HMM E-Value=3.5) 32 0.48
SB_13379| Best HMM Match : WD40 (HMM E-Value=1.3e-39) 31 1.1
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_47367| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_16196| Best HMM Match : LRR_1 (HMM E-Value=5.7) 29 3.4
SB_32585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_40034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_30843| Best HMM Match : DUF592 (HMM E-Value=3.9) 29 4.5
>SB_26635| Best HMM Match : DUF635 (HMM E-Value=0.018)
Length = 345
Score = 171 bits (416), Expect = 6e-43
Identities = 102/267 (38%), Positives = 139/267 (52%), Gaps = 21/267 (7%)
Query: 42 DWKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCF 101
+W+ I N F W+FP C GA DGKHVV++ P SGS Y+NYK T S+VL+A D +YCF
Sbjct: 66 EWQEIANDFESLWDFPNCIGAGDGKHVVMECPLNSGSNYFNYKGTFSLVLLAYGDARYCF 125
Query: 102 SYIDVGCNGRVSDGGVFRNCSLYEELEN------------GVLPEG----HVLVGDNAFP 145
+ +D+G G+ +D G F + L + N G E V V D
Sbjct: 126 TAVDIGQYGKCNDSGAFSDSVLGYKFGNNSFNIPPPAPLHGFCSEDGKAPFVTVVDEGLA 185
Query: 146 LKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKPMRYSPEKVVKI 205
L++Y ++P PG LT ++ IFNYRLSRARR +EN FGIL AR+R++ P++ + V I
Sbjct: 186 LRKYQMRPHPGRGLTEKKAIFNYRLSRARRTIENIFGILKARWRIYRSPIKADVKTVEGI 245
Query: 206 VKTCCALHNWLRQTKLQNRQYEYTVDSEHFEAGTSVPGNWRN--EPQSLGMQPIPXXXXX 263
VK LHN+L+ T+ +DSE G PG+WR S + P
Sbjct: 246 VKATVCLHNYLQLTENSAYSPAGFIDSEDM-TGNIRPGDWRRIVAGDSGALMSTP-SRQG 303
Query: 264 XXXXXXXXXXEKYANYFVG-SGSIPWQ 289
+ Y YF SGS+PWQ
Sbjct: 304 RTSFEGNLTRDLYTAYFNSPSGSVPWQ 330
>SB_37754| Best HMM Match : HTH_5 (HMM E-Value=9.4)
Length = 450
Score = 134 bits (324), Expect = 8e-32
Identities = 83/242 (34%), Positives = 119/242 (49%), Gaps = 19/242 (7%)
Query: 69 VIKAPPES-GSLY-YNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSL--- 123
VI+ P +S G L ++ K SI+ + + Y Y D+G N R SDG + CSL
Sbjct: 87 VIQTPLKSDGKLQRHSTKGNESIIALIMSRANYECLYADIGTNWRNSDGHAWAWCSLKKA 146
Query: 124 YEELENGV-------LPEG-----HVLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLS 171
+ L+N + LP G +V+ GD AFPL ++LKP+P LT++++I NYR+S
Sbjct: 147 LKSLDNPLDIPPPCPLPRGSSDVNYVITGDEAFPLANFMLKPYPSKSLTVEERIANYRIS 206
Query: 172 RARRIVENAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHNWLRQTKLQNRQYEY--T 229
R RRI EN GI R+R F+ P SP KV KI LHNWL +L Y +
Sbjct: 207 RGRRISENILGIFGKRWRCFKAPFLLSPFKVQKITLAALTLHNWLNSDRLSRNVYCHPGL 266
Query: 230 VDSEHFEAGTSVPGNWRNEPQSLGMQPIPXXXXXXXXXXXXXXXEKYANYFVGSGSIPWQ 289
VD E G +PG WR++ + P+ ++ +F G +PWQ
Sbjct: 267 VDKEDPLIGEIIPGAWRDDSPLESLVPLQPSLKHNHNIGAKEMRREFTRWFNDEGDVPWQ 326
Query: 290 AR 291
+
Sbjct: 327 RK 328
>SB_49311| Best HMM Match : Transposase_11 (HMM E-Value=0.27)
Length = 357
Score = 115 bits (277), Expect = 4e-26
Identities = 67/177 (37%), Positives = 95/177 (53%), Gaps = 14/177 (7%)
Query: 52 EQWNFPGCCGAIDGKHVVIKAPP---ESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGC 108
E W FP AIDG H+ IK PP + +Y+N+K SI+LM +VD Y F + G
Sbjct: 179 EVWQFPCSWAAIDGCHIPIKCPPGGLTASKVYHNFKNFFSIILMGMVDASYRFVWASCGF 238
Query: 109 NGRVSDGGVFRNCSLYEEL-----------ENGVLPEGHVLVGDNAFPLKEYLLKPFPGN 157
G D + + L+++L E GV+ +++GD+AFP+K +L+KP+ +
Sbjct: 239 PGNSHDSIILQFTELWQKLTTTSYIPEIGKEVGVVTVPPLILGDSAFPIKPWLMKPYTCS 298
Query: 158 RLTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHN 214
R T QQ+ FNYRLSRAR + E A+G L R+RV + S V C LHN
Sbjct: 299 RPTNQQRYFNYRLSRARMVREGAYGQLKGRWRVLLRRCECSNNNTKITVLACIVLHN 355
>SB_8441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 115 bits (276), Expect = 5e-26
Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 8/174 (4%)
Query: 120 NCSLYEELENGVLPEGHVLVGDNAFPLKEYLLKPFPGNRL-TLQQKIFNYRLSRARRIVE 178
N +E EN P ++LVGD+ F L+ +L + +P +R T Q++ NYRLSRARR++E
Sbjct: 5 NAERFEGFEN---PLPYLLVGDDIFGLQTWLQRSYPRSRSPTEDQQVHNYRLSRARRVIE 61
Query: 179 NAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHNWLRQTKLQNRQYEYTVDSEHFEAG 238
N F IL AR+RVF P+R S + V+ I K LHN LRQ VDSE + +G
Sbjct: 62 NTFAILRARWRVFGGPIRASVDTVMSITKAAVCLHNHLRQVNCAMYCPAGFVDSE-YASG 120
Query: 239 TSVPGNWRN--EPQSLGMQPIPXXXXXXXXXXXXXXXEKYANYFVG-SGSIPWQ 289
T G WR + +S G+QPIP + +YF+ +G++PWQ
Sbjct: 121 TIKKGEWRRLVQNESGGLQPIPAIRGRRNSDSAMQTRDALKDYFLSDAGAVPWQ 174
>SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2061
Score = 107 bits (258), Expect = 8e-24
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 46 IENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYID 105
I+ F ++ FPG G IDG HV ++AP + Y N K +I + AV D+K F+ I
Sbjct: 1850 IKQAFYDKHGFPGVIGCIDGTHVKLQAPDNLENDYVNRKGQPNINVQAVCDNKGLFTNIV 1909
Query: 106 VGCNGRVSDGGVFRNCSLYE--ELENGVLPEGHVLVGDNAFPLKEYLLKPFPGNRLTLQQ 163
G D +FRN S+ E E+ + EG+ L+GD+ +P + +L+ P+P N Q
Sbjct: 1910 ARWPGSTHDAFIFRNSSIQNTLEREHTRIDEGY-LLGDSGYPCRPFLMTPYP-NPANQHQ 1967
Query: 164 KIFNYRLSRARRIVENAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHN 214
+ FN S+ R +E FG+ RF + +R PEKV +++ C LHN
Sbjct: 1968 EDFNEAHSKTRVKIEQCFGLFKRRFHLMHGEVRMKPEKVSQLIGACAVLHN 2018
>SB_36174| Best HMM Match : Transposase_11 (HMM E-Value=0.00013)
Length = 427
Score = 105 bits (253), Expect = 3e-23
Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 38 PTFTDWKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDH 97
P+ + + I+ F + FPG G IDG HV I+ PP + + + N K +SI + A+ D+
Sbjct: 228 PSDEEKRQIKEAFFAKKGFPGVIGCIDGTHVRIQGPPRNENDFVNRKGFHSINVQAICDN 287
Query: 98 KYCFSYIDVGCNGRVSDGGVFRNCSLYE--ELENGVLPEGHVLVGDNAFPLKEYLLKPFP 155
K F+ + G D +F++ +++ +LE+ + +G VL+GDN + K +L+ PFP
Sbjct: 288 KGLFTNVVAKWPGNAHDSFIFQDSGIHDKLQLEHKSVEDG-VLIGDNGYGCKPFLMTPFP 346
Query: 156 GNRLTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHN 214
+ T +Q+ +N L + R +E FGI RF + +R P K ++ C LHN
Sbjct: 347 -HPDTPKQEAYNEALGKTRVKIEQTFGIFKRRFHLMHTEIRVDPSKATLLIGACAVLHN 404
>SB_53345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 104 bits (249), Expect = 1e-22
Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 38 PTFTDWKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDH 97
P+ + + I+ F + FPG G IDG HV I+ PP + + + N K +SI + A+ D+
Sbjct: 268 PSDEEKRQIKEAFFAKKGFPGVIGCIDGTHVRIQGPPRNENDFVNRKGFHSINVQAICDN 327
Query: 98 KYCFSYIDVGCNGRVSDGGVFRNCSLYE--ELENGVLPEGHVLVGDNAFPLKEYLLKPFP 155
K F+ + G D +F++ +++ +LE+ + +G VL+GD+ + K +L+ PFP
Sbjct: 328 KGLFTNVVAKWPGNAHDSFIFQDSGIHDKLQLEHKSVEDG-VLIGDSGYGCKPFLMTPFP 386
Query: 156 GNRLTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHN 214
+ T +Q+ +N L + R +E FGI RF + +R P K ++ C LHN
Sbjct: 387 -HPETPKQEAYNEALGKTRVKIEQTFGIFKRRFHLMHTEIRVDPSKATLLIGACAVLHN 444
>SB_4275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 93.1 bits (221), Expect = 2e-19
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 15/134 (11%)
Query: 94 VVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENG----------VLPEG-----HVL 138
++ + Y Y D+G N R SDG + CSL + LE+ +LP G +V+
Sbjct: 89 ILQYHYECLYADIGTNERNSDGHAWEQCSLKKALESPDNLLDIPPPCLLPGGSSDVNYVI 148
Query: 139 VGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKPMRYS 198
GD AF L ++LKP+P LT++++I NYR+SR RRI EN GI R+R F P + S
Sbjct: 149 TGDEAFTLANFMLKPYPRKSLTVEERIANYRISRGRRISENMLGIFGKRWRCFRAPFQLS 208
Query: 199 PEKVVKIVKTCCAL 212
P KV KI L
Sbjct: 209 PFKVQKITLAALTL 222
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 15/77 (19%)
Query: 94 VVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENG----------VLPEG-----HVL 138
V+ + Y Y D+G N R SDG + CSL + LE+ +LP G +V+
Sbjct: 12 VLQYDYECLYADIGTNERNSDGHAWEQCSLKKALESPDNLLDIPPPCLLPGGSSDVNYVI 71
Query: 139 VGDNAFPLKEYLLKPFP 155
GD AF L ++LKP+P
Sbjct: 72 TGDEAFTLANFMLKPYP 88
>SB_34969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 46 IENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYID 105
I+ F ++ FPG G IDG HV ++AP + Y N K +SI + AV D+K F+ I
Sbjct: 69 IKQAFYDKHGFPGVIGCIDGTHVKLQAPTNHENDYVNRKGQHSINVQAVCDNKGLFTNIV 128
Query: 106 VGCNGRVSDGGVFRNCSLYE--ELENGVLPEGHVLVGDNAFPLKEYLLKPFPGNRLTLQQ 163
G D +FRN S+ E E+ + EG+ L+GD+ +P + +L+KP+P N Q
Sbjct: 129 ARWPGSTHDAFIFRNSSIQNTLEREHTRIDEGY-LLGDSGYPCRPFLMKPYP-NPANQHQ 186
Query: 164 KIFNYRLSRARRIVENAFGILAARFRVFEKPMRYSPEK 201
+ FN S+ R +E FG+ RF + ++ +K
Sbjct: 187 EDFNEAHSKTRVKIEQCFGLFKRRFHLMHVSSQHWTQK 224
>SB_462| Best HMM Match : RVT_1 (HMM E-Value=7.7e-25)
Length = 863
Score = 74.5 bits (175), Expect = 9e-14
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 43 WKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFS 102
W+ I F +WN P GAIDGK ++++ PP +GS Y++YK S++ + + Y
Sbjct: 128 WREIAASFYSKWNIPNNIGAIDGKRILVEKPPSAGSHYHDYKGNESVIALILSGPNYACL 187
Query: 103 YIDVGCNGRVSDG 115
Y D+G NGR SDG
Sbjct: 188 YADIGTNGRNSDG 200
>SB_41414| Best HMM Match : DUF635 (HMM E-Value=0.0018)
Length = 196
Score = 71.7 bits (168), Expect = 6e-13
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 56 FPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDG 115
FP GAIDG + I+AP E LY ++K ++SI MAV F+++ G V D
Sbjct: 10 FPQVIGAIDGLLINIRAPYEDEHLYVSHKGSHSINAMAVCKADLMFTHMVAKWQGSVHDS 69
Query: 116 GVFRNCSLYEELE-NGVLPEGHVLVGDNAFPLKEYLLKPF-PGNRLTLQQKIFNYRLSRA 173
++ + L LE NG L+G+ + L+ YL+ PF P + + Q + ++
Sbjct: 70 AIYNSSMLQVHLESNGA---AGWLLGNRGYALRTYLMTPFWPADVQSRPQLNYQNAHTKT 126
Query: 174 RRIVENAFGILAARFR 189
R +E AFG+ ARFR
Sbjct: 127 RNTIERAFGLWKARFR 142
>SB_46987| Best HMM Match : Sigma70_r4 (HMM E-Value=1.4)
Length = 252
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 43 WKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFS 102
W+ I F +WN P GAIDGK ++I+ PP +GS Y++YK SI+ + + Y
Sbjct: 128 WREIAASFYCKWNIPNNIGAIDGKRILIQKPPSAGSHYHDYKGNESIIALIMSGPNYECL 187
Query: 103 YIDVGCNGRVSDGGV 117
Y D+ NGR SDG V
Sbjct: 188 YADISTNGRNSDGHV 202
>SB_21419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 66.5 bits (155), Expect = 2e-11
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 50 FREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVG 107
F+ +W FP C GAIDG H+ +KAP E + YYN K SI+L VVD +Y F I+VG
Sbjct: 80 FKHKWGFPQCVGAIDGSHIPVKAPIEFHADYYNRKGWYSIILQGVVDSRYRFIDINVG 137
>SB_17229| Best HMM Match : DUF635 (HMM E-Value=0.25)
Length = 158
Score = 64.5 bits (150), Expect = 1e-10
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 110 GRVSDGGVFRNCSLYEELE--NGVLPEGHVLVGDNAFPLKEYLLKPFPGNRLTLQQKIFN 167
G D +FRN S+ LE + + EG++L D+ +P + +L+ P+P N Q+ FN
Sbjct: 12 GGTHDAFIFRNSSIQNTLEREHTRIDEGYLLA-DSGYPCRSFLMTPYP-NPANQHQEDFN 69
Query: 168 YRLSRARRIVENAFGILAARFRVFEKPMRYSPEKVVKIVKTCCALHN 214
S+ R +E FG+ RF + +R PEKV +++ C LHN
Sbjct: 70 EAHSKTRVKIEQCFGLFR-RFHLMHGEVRMKPEKVSQLIGACAVLHN 115
>SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06)
Length = 628
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/60 (53%), Positives = 39/60 (65%)
Query: 39 TFTDWKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHK 98
T + K I N F + W+FP GA DGKHVVI+ P SGS +YNYK T SI+L+A D K
Sbjct: 151 TQEELKSIANDFEDIWHFPHSIGAGDGKHVVIECPFNSGSEFYNYKGTYSIMLLAYGDAK 210
>SB_11462| Best HMM Match : UBA (HMM E-Value=1.3)
Length = 462
Score = 63.3 bits (147), Expect = 2e-10
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 39 TFTDWKIIENGFREQWNFPGCCGAIDGKHVVIKAPP--ESGSLYYNYK-ETNSIVLMAVV 95
T D + +GF + P GAI IKAP YYN + +S++L AV
Sbjct: 194 TEEDTRAAIDGFEGKCQIPQLAGAIKAVRFKIKAPSLVTHKMKYYNDNLKCHSMILQAVT 253
Query: 96 DHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVL-------PEG----HVLVGDNAF 144
D F + G G +++ +Y+ ++ GV+ EG ++ D ++
Sbjct: 254 DSSGKFLDVSTGYPGGITNTEALAISDIYKNVKQGVILNSPSATVEGLQVKPIIATDASY 313
Query: 145 PLKEYLLKPFPGNR-LTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKP-MRYSPEKV 202
L+++ + P+P N L+ Q+ FN L A I E+A L R+ + + + EK+
Sbjct: 314 KLRKWCICPYPDNNTLSPSQERFNSELGSAVHIAEDALARLRGRWNTLARSCLDENVEKI 373
Query: 203 VKIVKTCCALHN 214
+ V CC LHN
Sbjct: 374 PETVLICCVLHN 385
>SB_6884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 66 KHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYE 125
+ + +K P SGS YY+YK N ++LMA V +Y + DVG NGR SDG V+ CS+
Sbjct: 289 ERIAMKQPENSGSHYYDYKGNNIVILMAAVGPRYEILWADVGVNGRASDGTVWNKCSVKN 348
Query: 126 ELENGVLP 133
L + P
Sbjct: 349 ALASNENP 356
>SB_13873| Best HMM Match : Transposase_11 (HMM E-Value=2.4)
Length = 200
Score = 61.3 bits (142), Expect = 9e-10
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P ES + YN +K +++ +V + GR D +
Sbjct: 13 CFGFVDGTVRPISRPVESQEVVYNGHKRVHALKFQSVTLPNGLIGNMFGPIEGRRHDASM 72
Query: 118 FRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
L ++LE G + GD A+P++ +L P+ GN LT Q+ FN + + R
Sbjct: 73 LGESGLLQDLEREAFSTGGQPMCIYGDPAYPMRVHLQAPYRGNGLTPAQQAFNDSMCKVR 132
Query: 175 RIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHNWL 216
VE FG + F+ F+ ++ +V K+ C + N L
Sbjct: 133 TSVEWVFGDIVRSFKSMDFKNNLKIGLSQVGKMYIVCSIIRNAL 176
>SB_43115| Best HMM Match : SapB_1 (HMM E-Value=3.9)
Length = 495
Score = 60.9 bits (141), Expect = 1e-09
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 39 TFTDWKIIENGFREQWNFPGCCGAIDGKHVVIKAPP--ESGSLYYNYK-ETNSIVLMAVV 95
T D + +GF + P GAI IKAP YYN + +S+ L AV
Sbjct: 178 TEEDTRAAIDGFEGKCQIPQLAGAIKAVRFKIKAPSLVTHKMKYYNDNLKCHSMTLQAVT 237
Query: 96 DHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVL-------PEG----HVLVGDNAF 144
D F + G G +++ +Y+ ++ GV+ EG ++ D ++
Sbjct: 238 DSSGKFLDVSTGYPGGITNTEALAMSDIYKNVKQGVILNSPSATVEGLQVKPIIATDASY 297
Query: 145 PLKEYLLKPFPGNR-LTLQQKIFNYRLSRARRIVENAFGILAARFRVFEKP-MRYSPEKV 202
L+++ + P+P N L+ Q+ FN L A I E+A L R+ + + EK+
Sbjct: 298 KLRKWCICPYPDNNMLSPSQERFNSELGSAVHIAEDALARLRGRWNTLAGSCLDENVEKI 357
Query: 203 VKIVKTCCALHN 214
+ V CC LHN
Sbjct: 358 PETVLICCVLHN 369
>SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 121 CSLYEELENGVLPEGHVLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENA 180
CSLY +++ E + VG+ A+PL YL+K + T+Q++ F +L ++R ++E A
Sbjct: 239 CSLYITVKD----EPPIPVGNPAYPLVPYLMKEYSNGGATVQEQYFGLKLCQSRMVIEFA 294
Query: 181 FGILAARFRVFEKPMRYSPEKVVKIVKTCCALHNW 215
FG L RF + M + +++ ++ C LHN+
Sbjct: 295 FGRLKGRFGALRRAMDINMDELPYVIYACFVLHNF 329
>SB_13853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 60.9 bits (141), Expect = 1e-09
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P ES + YN +K +++ +V+ + GR D +
Sbjct: 171 CFGFVDGTVRPISRPVESQEVVYNGHKRVHALKFQSVILPNGLKGNMFGPIEGRRHDASM 230
Query: 118 FRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
L ++LE L G + GD A+P++ +L P+ GN LT + FN + + R
Sbjct: 231 LGESGLLQDLEREALSTGGQPMCIYGDPAYPMRVHLQAPYRGNGLTPAHEAFNDSMCKVR 290
Query: 175 RIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHNWL 216
VE FG + F+ F+ ++ +V K+ C + N L
Sbjct: 291 TSVEWVFGDIVRSFKSMDFKNNLKIGLSQVGKMYIVCSIIRNAL 334
>SB_21466| Best HMM Match : Xlink (HMM E-Value=1.2)
Length = 347
Score = 56.4 bits (130), Expect = 3e-08
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 6/162 (3%)
Query: 59 CCGAIDGKHVVIKAPP-ESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G IDG I P ++Y +K ++I +VV + + G+ D +
Sbjct: 160 CWGFIDGTVRPICRPRLHQRTMYNGHKRVHAIKFQSVVAPNGLIANLFGPIEGKRHDSAM 219
Query: 118 FRNCSLYEELE-NGVLPEGH--VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
L LE + + G L GD A+PL+ + PF G L QQ++FN +S+ R
Sbjct: 220 LHESGLLPLLERHAINTAGQPLCLYGDPAYPLRAQMKCPFRGRNLQAQQELFNLSMSKVR 279
Query: 175 RIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
VE F ++ F F+K ++ V K+ C L N
Sbjct: 280 TAVEWVFNDISTYFAYLDFKKDLKIVLSPVGKMYIVCALLRN 321
>SB_29291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 55.2 bits (127), Expect = 6e-08
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P E + YN +K + I +VV + + G+ D +
Sbjct: 120 CWGFVDGTVRPICRPGEHQRIMYNGHKRVHGIKFQSVVAPNGLIANLFGPVEGKRHDARM 179
Query: 118 FRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
+ L +L+ + + + GD A+PL+ L P+ LT Q+ FN +S+ R
Sbjct: 180 LQMSGLLHQLQQYSVDQARQPLCIYGDPAYPLRVQLQAPYKHAHLTADQEAFNSSMSKVR 239
Query: 175 RIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
VE FG + + F F+K ++ V + C L N
Sbjct: 240 SAVEWVFGDIVSYFAFLDFKKNLKMGLSPVGTMYAACALLRN 281
>SB_21257| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 55.2 bits (127), Expect = 6e-08
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P E + YN +K + I +VV + + G+ D +
Sbjct: 173 CWGFVDGTVRPICRPGEHQRIMYNGHKRVHGIKFQSVVAPNGLIANLFGPVEGKRHDARM 232
Query: 118 FRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
+ L +L+ + + + GD A+PL+ L P+ LT Q+ FN +S+ R
Sbjct: 233 LQMSGLLHQLQQYSVDQARQPLCIYGDPAYPLRVQLQAPYKHAHLTADQEAFNSSMSKVR 292
Query: 175 RIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
VE FG + + F F+K ++ V + C L N
Sbjct: 293 SAVEWVFGDIVSYFAFLDFKKNLKMGLSPVGTMYAACALLRN 334
>SB_47884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 110 GRVSDGGVFRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIF 166
GR D + L ++LE G + GD A+P++ +L P+ GN LT Q+ F
Sbjct: 2 GRRHDASMLGESGLLQDLEREAFSTGGQPMCIYGDPAYPMRVHLQAPYRGNGLTPAQEAF 61
Query: 167 NYRLSRARRIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHNWL 216
N + + R VE FG + F+ F+ ++ +V K+ C + N L
Sbjct: 62 NDSMCKVRTSVEWVFGDIVRSFKSMDFKNNLKIGLSQVGKMYIVCSIIRNAL 113
>SB_9580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 110 GRVSDGGVFRNCSLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPFPGNRLTLQQKIF 166
G+ D + ++ ELEN P G + GD A+PL+ +L PF LT + +
Sbjct: 290 GKRHDAFMLMESNILHELENNAFSPTGQAMCMYGDPAYPLRVHLQAPFRNGVLTPMMEEY 349
Query: 167 NYRLSRARRIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
N R+S R VE FG + F+ F+K ++ + V K+ C L N
Sbjct: 350 NSRMSSVRSSVEWLFGEIINDFKFLDFKKNLKVNLSCVGKMYLVCAFLEN 399
>SB_245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 49.2 bits (112), Expect = 4e-06
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 110 GRVSDGGVFRNCSLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPFPGNRLTLQQKIF 166
G+ D + ++ ELEN P G + GD A+PL+ +L PF LT + +
Sbjct: 7 GKRHDAFMLMESNILHELENNAFSPTGQAMCMYGDPAYPLRVHLQAPFRNGVLTPMMEEY 66
Query: 167 NYRLSRARRIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
N R+S R VE FG + F+ F+K ++ + V K+ C L N
Sbjct: 67 NSRMSSVRSSVEWLFGEIINDFKFLDFKKNLKLNLNCVGKMYLVCAFLEN 116
>SB_18706| Best HMM Match : Transposase_11 (HMM E-Value=0.44)
Length = 248
Score = 48.4 bits (110), Expect = 7e-06
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 6/164 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P + + YN +K +++ +V + GR+ D +
Sbjct: 61 CFGFVDGTVRPITRPGLNQRVVYNGHKRVHALKYQSVALPNGLIGQLFRPVEGRMHDARM 120
Query: 118 FRNCSLYEEL-ENGVLPEGH--VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
LY+ L ++ P G + GD A+PL +L PF L + FN +S R
Sbjct: 121 LAVSGLYDSLAQHAFSPAGQEMCIYGDPAYPLHNHLQAPFRMGVLNGPMQDFNESMSSVR 180
Query: 175 RIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHNWL 216
VE F + F+ F+K ++ V K+ C L N L
Sbjct: 181 ISVEWLFADIINYFKFLDFKKNLKIGLSDVGKMYMVCALLRNGL 224
>SB_9923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 48.0 bits (109), Expect = 9e-06
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P ES + YN +K +++ +V + GR D +
Sbjct: 120 CFGFVDGTVRPISRPVESQEVVYNGHKRVHALKFQSVTLPNGLIGNMFGPIEGRRHDASM 179
Query: 118 FRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFN 167
L ++LE G + GD A+P++ +L P+ GN LT Q+ FN
Sbjct: 180 LGESGLLQDLEREAFSTGGQPMCIYGDPAYPMRVHLQAPYRGNGLTPAQQAFN 232
>SB_6457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 47.2 bits (107), Expect = 2e-05
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 110 GRVSDGGVFRNCSLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPFPGNRLTLQQKIF 166
G+ D + ++ ELEN P G + GD A+PL+ +L PF LT + +
Sbjct: 2 GKRHDAFMLMESNILHELENNAFSPTGQAMCMYGDPAYPLRVHLQAPFRNGVLTPMMEEY 61
Query: 167 NYRLSRARRIVENAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
N R+S R VE FG + F F+K ++ + V K+ C L N
Sbjct: 62 NSRMSSVRSSVEWLFGEIINDFIFLDFKKNLKLNLSCVGKMYLVCAFLEN 111
>SB_48458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 122 SLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVE 178
++ ELEN P G + GD A+PL+ +L PF LT + +N R+S R VE
Sbjct: 6 NILHELENNAFSPTGQAMCMYGDPAYPLRVHLQAPFRNGVLTPMMEEYNSRMSSVRSSVE 65
Query: 179 NAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
FG + F+ F+K ++ + V K+ C L N
Sbjct: 66 WLFGEIINDFKFLDFKKNLKLNLSCVGKMCLVCAFLEN 103
>SB_36811| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=8.1)
Length = 249
Score = 42.3 bits (95), Expect = 5e-04
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P E + YN +K + I +VV + + G+ D +
Sbjct: 126 CWGFVDGTVRPICRPGEHQRIMYNGHKRVHGIKFQSVVAPNGLIANLFGPVEGKRHDARM 185
Query: 118 FRNCSLYEELENGVLPEGH---VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRAR 174
+ L +L+ + + + GD +PL+ L P+ LT Q+ FN +S+ R
Sbjct: 186 LQMSGLLHQLQQYSVDQARQPLCIYGDPVYPLRVQLQAPYKHAHLTADQEAFNSSMSKVR 245
Query: 175 RIV 177
V
Sbjct: 246 SAV 248
>SB_36588| Best HMM Match : HEAT (HMM E-Value=6.9)
Length = 111
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 110 GRVSDGGVFRNCSLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPFPGNRLTLQQKIF 166
G+ D + ++ ELEN P G + GD A PL+ +L PF LT + +
Sbjct: 2 GKRHDAFMLMESNILHELENNAFSPTGQAMCMYGDPAHPLRVHLQAPFHNGVLTPMMEEY 61
Query: 167 NYRLSRARRIVENAFGILAARFRVFE 192
N R+S R VE FG + F+ +
Sbjct: 62 NSRMSSVRSSVEWLFGEIIKDFKFLD 87
>SB_57291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 138 LVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFGILAARFRV--FEKPM 195
+ GD +PL+ L P+ LT Q+ FN +S+ R VE FG + + F F+K +
Sbjct: 25 IYGDPVYPLRVQLQAPYKHAHLTADQEAFNSSMSKVRSAVEWVFGDIVSYFAFLDFKKNL 84
Query: 196 RYSPEKVVKIVKTCCALHN 214
+ V + C L N
Sbjct: 85 KMGLSPVGTMYAACALLRN 103
>SB_45119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 138 LVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFGILAARFRV--FEKPM 195
+ GD +PL+ L P+ LT Q+ FN +S+ R VE FG + + F F+K +
Sbjct: 25 IYGDPVYPLRVQLQAPYKHAHLTADQEAFNSSMSKVRSAVEWVFGDIVSYFAFLDFKKNL 84
Query: 196 RYSPEKVVKIVKTCCALHN 214
+ V + C L N
Sbjct: 85 KMGLSPVGTMYAACALLRN 103
>SB_48179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 59 CCGAIDGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
C G +DG I P ++ + YN +K +S+ +V ++ G+ D +
Sbjct: 125 CFGFVDGTVPPISRPGQNQRIVYNGHKRVHSLKFQSVALPNSLIGHVYGPVEGKRHDAFM 184
Query: 118 FRNCSLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPF 154
++ ELEN P G + GD A+PL+ +L PF
Sbjct: 185 LMESNILHELENNAFSPTGQAMCMYGDPAYPLRVHLQAPF 224
>SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 41.5 bits (93), Expect = 8e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 46 IENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHK 98
I+ F + FPG G IDG HV I+ PP + + + K +SI + A+ D+K
Sbjct: 1386 IKKSFFAKKGFPGVIGCIDGTHVRIQGPPRNENDFVKRKGFHSINVQAICDNK 1438
>SB_52939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 122 SLYEELENGVL-PEGHVLV--GDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVE 178
++ ELEN P G + GD A L+ +L PF LT + +N R+S R VE
Sbjct: 18 NILHELENNAFSPTGQAMCMYGDPAHLLRVHLQAPFHNGVLTPMMEEYNSRMSSVRWSVE 77
Query: 179 NAFGILAARFRV--FEKPMRYSPEKVVKIVKTCCALHN 214
FG + F+ F+K ++ + V K+ C L N
Sbjct: 78 WLFGEIINDFKFLDFKKNLKLNLSCVGKMYLVCAFLEN 115
>SB_25595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 42 DWKIIENGFREQWNFPGCCGAIDGKHVVIK 71
+W+ I N F W+FP C A DGKHVV++
Sbjct: 66 EWQEIANDFESLWDFPHCIEAGDGKHVVME 95
>SB_11771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 138 LVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFGILAARF 188
+ GD +PL+ L P+ LT Q+ FN +S+ R VE FG + + F
Sbjct: 25 IYGDPVYPLRVQLQAPYKHAHLTADQEAFNSSMSKVRSAVEWVFGDIVSYF 75
>SB_48180| Best HMM Match : Sigma70_r4 (HMM E-Value=8)
Length = 183
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 46 IENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSI 89
I+ F ++ FPG G IDG HV ++AP Y N K +S+
Sbjct: 131 IKQAFYDKHGFPGVIGCIDGTHVKLQAPTNHEKDYVNRKRQHSM 174
>SB_9315| Best HMM Match : Transposase_11 (HMM E-Value=0.0014)
Length = 197
Score = 37.1 bits (82), Expect = 0.017
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 8/171 (4%)
Query: 50 FREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCN 109
FR+ N + K V + + G++Y YK ++ + V+ ++
Sbjct: 21 FRKLKNIRASIDCTEFKCEVPRDYGKQGNMYSAYKHHTTMKCLIAVNPIGAAVFVSDLFE 80
Query: 110 GRVSDGGVFRNCSLYEELENG--VLPEGHVLVGDNAFPLK-EYLLKPFPGNR--LTLQQK 164
G D VF+ C + + G L + V D PL+ + + PF G R T
Sbjct: 81 GSADDVKVFQTCGILRHVNPGDSFLVDKGFTVQDLLLPLQAKIFIPPFLGKRESFTKVDI 140
Query: 165 IFNYRLSRARRIVENAFGILAARFRVFEK--PMRYSPEKVVKIVKTCCALH 213
+ R+++AR VE F +FR+ ++ P+ +P + +CC ++
Sbjct: 141 VLTKRIAKARIHVER-FNERLKKFRLLDRTIPLVLAPIASQLVFVSCCLVN 190
>SB_17353| Best HMM Match : Transposase_11 (HMM E-Value=1.3)
Length = 200
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 80 YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVLPEGHVLV 139
Y NYK N++ ++ + + S++ GR SD + NC + E +L G +++
Sbjct: 57 YSNYKSHNTVKILVGITPQGSISFVSKAWGGRTSDKFLTDNCGMLE-----LLVPGDLVM 111
Query: 140 GDNAFPLKEYLL 151
D F + E L+
Sbjct: 112 ADRGFTINESLM 123
>SB_22894| Best HMM Match : Transposase_11 (HMM E-Value=0.0015)
Length = 197
Score = 35.9 bits (79), Expect = 0.039
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 8/171 (4%)
Query: 50 FREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCN 109
FR+ N + K V + + G++Y YK ++ + V+ ++
Sbjct: 21 FRKFKNIRASIDCTEFKCEVPRDYGKQGNMYSAYKHHTTMKCLIAVNPNGAAVFVSDLFE 80
Query: 110 GRVSDGGVFRNCSLYEELENG--VLPEGHVLVGDNAFPLK-EYLLKPFPGNR--LTLQQK 164
G D VF+ C + + G L + V D PL+ + + PF G R T +
Sbjct: 81 GSADDVKVFQTCGILRHVNPGDSFLVDKGFTVQDLLLPLQAKIFIPPFLGKRESFTKEGI 140
Query: 165 IFNYRLSRARRIVENAFGILAARFRVFEK--PMRYSPEKVVKIVKTCCALH 213
+ +++AR VE F +FR+ ++ P+ +P + +CC ++
Sbjct: 141 VLTKPIAKARIHVER-FNERLKKFRLLDRTIPLVLAPIASQLVFVSCCLVN 190
>SB_49933| Best HMM Match : Transposase_11 (HMM E-Value=0.00093)
Length = 197
Score = 35.5 bits (78), Expect = 0.052
Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 8/171 (4%)
Query: 50 FREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCN 109
FR+ N + K V + + G++Y YK ++ + V+ ++
Sbjct: 21 FRKFKNIRASIDCTEFKCEVPRDYGKQGNMYSAYKHHTTMKCLIAVNPNGAAVFVSDLFE 80
Query: 110 GRVSDGGVFRNCSLYEELENG--VLPEGHVLVGDNAFPLK-EYLLKPFPGNR--LTLQQK 164
G D VF+ C + + G L + V D L+ + + PF G R T +
Sbjct: 81 GSADDVKVFQTCGILRHVNPGDSFLVDKGFTVQDLLLLLQAKIFIPPFLGKRESFTKEDI 140
Query: 165 IFNYRLSRARRIVENAFGILAARFRVFEK--PMRYSPEKVVKIVKTCCALH 213
+ R+++AR VE F +FR+ ++ P+ +P + +CC ++
Sbjct: 141 VLTKRIAKARIHVER-FNERLKKFRLLDRTIPLVLAPIASQLVFVSCCLVN 190
>SB_9921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 35.5 bits (78), Expect = 0.052
Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 75 ESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENG--VL 132
+ G+++ +YK N++ + V ++ G + D +FR + + + G +L
Sbjct: 391 QQGNMFSSYKHHNTMKCLIAVTPNGSACFVSDLFEGSIDDVSIFRESGILKHINPGDAIL 450
Query: 133 PEGHVLVGDNAFPLKEYL-LKPFPGNR--LTLQQKIFNYRLSRARRIVENAFGILAARFR 189
+ V D F + + + PF G R LT ++++ R+++AR VE F +FR
Sbjct: 451 VDKGFTVQDLLFNKQATIHIPPFLGKRDCLTKEEELATKRIAKARIHVER-FNERLKKFR 509
Query: 190 V 190
+
Sbjct: 510 L 510
>SB_47954| Best HMM Match : Transposase_11 (HMM E-Value=0.0015)
Length = 378
Score = 35.5 bits (78), Expect = 0.052
Identities = 32/146 (21%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 75 ESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENG--VL 132
+ G++Y YK ++ + V+ ++ G D VF+ C + + G L
Sbjct: 227 KQGNMYSAYKHHTTMKCLIAVNPNGAAVFVSDLFEGSADDVKVFQTCGILRHVNPGDSFL 286
Query: 133 PEGHVLVGDNAFPLK-EYLLKPFPGNR--LTLQQKIFNYRLSRARRIVENAFGILAARFR 189
+ V D PL+ + + PF G R T + + +++AR VE F +FR
Sbjct: 287 VDKGFTVQDLLLPLQAKIFIPPFLGKRESFTKEGIVLTKPIAKARIHVER-FNERLKKFR 345
Query: 190 VFEK--PMRYSPEKVVKIVKTCCALH 213
+ ++ P+ +P + +CC ++
Sbjct: 346 LLDRTIPLVLAPIASQLVFVSCCLVN 371
>SB_30507| Best HMM Match : Antimicrobial17 (HMM E-Value=1.4)
Length = 86
Score = 35.1 bits (77), Expect = 0.069
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 139 VGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFG 182
VGD AFP +LLK + + FN +L AR + E+A+G
Sbjct: 30 VGDAAFPPSSWLLKAYSDTTTDAAENNFNKKLRAARVVSEHAYG 73
>SB_13536| Best HMM Match : DUF1433 (HMM E-Value=2.6)
Length = 352
Score = 34.7 bits (76), Expect = 0.091
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 76 SGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVL-PE 134
+ S +K ++I +VV + + GR D G+ ++ L + L+ P
Sbjct: 258 NASFINGHKRVHAIKFQSVVVPNEMVANMYCPVEGRKHDSGMLKDSGLLQSLQQHAFGPT 317
Query: 135 GH--VLVGDNAFPLKEYLLKPF 154
G L GD+A+PL+ +L PF
Sbjct: 318 GQPMALYGDHAYPLRVHLQAPF 339
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 33.9 bits (74), Expect = 0.16
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 107 GCNGRVSDGGVFRNCSLYEELENGVLP---EGHVLVGDNAFPLKEYLLKPFPGNRLTLQQ 163
G GR D G+ R+ L +ELE E L GD A+P + +L PF L
Sbjct: 41 GEQGRAHDAGMLRDSGLLQELETDAFSPTREAKCLYGDPAYPHRIHLQGPFREPPLNPAM 100
Query: 164 KIFNYRLSRARRIVENAFGILAARFRVFEK 193
+ N +S VE+ + + F F++
Sbjct: 101 EESNKSMSFVHCPVEDHRERMRSNFGGFDR 130
>SB_53426| Best HMM Match : THAP (HMM E-Value=0.00058)
Length = 531
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 80 YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVLPEGHVLV 139
+ +YK N++ ++ + + S++ GR SD + NC + E+L +P G ++
Sbjct: 370 FSSYKNHNTVKILIGITPQGTISFVSEAWGGRTSDKFLTENCGILEKL----IP-GDTII 424
Query: 140 GDNAFPLKE 148
D F + E
Sbjct: 425 ADRGFTISE 433
>SB_37435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 138 LVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVENAFG 182
+ GD A+PL+ L P L Q+ FN +S+ R VE FG
Sbjct: 260 IYGDPAYPLRVQLQAPCKHAHLIADQEAFNSSMSKVRLAVEWVFG 304
>SB_52688| Best HMM Match : Gpi1 (HMM E-Value=1.8)
Length = 475
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 80 YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVLPEGHVLV 139
+ +YK N++ ++ + + S++ GR SD + NC + E+L +P G ++
Sbjct: 339 FSSYKNHNTVKILIGITPQGTISFVSEAWGGRTSDKFLTENCGILEKL----IP-GDTIM 393
Query: 140 GDNAFPLKE 148
D F + E
Sbjct: 394 ADRGFTISE 402
>SB_46021| Best HMM Match : C1_1 (HMM E-Value=1.1)
Length = 632
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 80 YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVLPEGHVLV 139
+ +YK N++ ++ + + S++ GR SD + NC + E+L +P G ++
Sbjct: 471 FSSYKNHNTVKILIGITPQGTISFVSEAWGGRTSDKFLTENCGILEKL----IP-GDTIM 525
Query: 140 GDNAFPLKE 148
D F + E
Sbjct: 526 ADRGFTISE 534
>SB_36456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 120 NCSLYEELENGVLPEGH--VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFN 167
N + Y+ L+ G + GD A+P++ +L P+ GN LT Q+ FN
Sbjct: 12 NQACYKTLKEAFSTGGQPMCIYGDPAYPMRVHLQAPYRGNGLTPAQQAFN 61
>SB_25623| Best HMM Match : THAP (HMM E-Value=0.00058)
Length = 538
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 80 YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVLPEGHVLV 139
+ +YK N++ ++ + + S++ GR SD + NC + E+L +P G ++
Sbjct: 377 FSSYKNHNTVKILIGITPQGTISFVSEAWGGRTSDKFLTENCGILEKL----IP-GDTIM 431
Query: 140 GDNAFPLKE 148
D F + E
Sbjct: 432 ADRGFTISE 440
>SB_17382| Best HMM Match : Gpi1 (HMM E-Value=2.6)
Length = 280
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 80 YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCSLYEELENGVLPEGHVLV 139
+ +YK N++ ++ + + S++ GR SD + NC + E+L +P G ++
Sbjct: 183 FSSYKNHNTVKILIGITPQGTISFVSEAWGGRTSDKFLTENCGILEKL----IP-GDTIM 237
Query: 140 GDNAFPLKE 148
D F + E
Sbjct: 238 ADRGFTISE 246
>SB_59059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 32.3 bits (70), Expect = 0.48
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 63 IDGKHVVIKAPPESGSL-YYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGV 117
+DG H+ ++ P + Y+N K+ SIV+ AV + F + G G + D +
Sbjct: 70 VDGSHIALRTVPVDKRIDYFNRKQDYSIVVQAVGNASMKFLDVSTGYPGSLHDARI 125
>SB_2792| Best HMM Match : Sod_Fe_N (HMM E-Value=3.5)
Length = 290
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 64 DGKHVVIKAPPESGSLYYN-YKETNSIVLMAVVDHKYCFSYIDVGCNGRVSDGGVFRNCS 122
DG I P + + YN +K +++ +V + GR+ D +
Sbjct: 166 DGTVRPITRPGLNQRVVYNGHKRVHALKYQSVALPNGLIGQLFRPVEGRMHDARMLAVSG 225
Query: 123 LYEEL-ENGVLPEGH--VLVGDNAFPLKEYLLKPFPGNRLTLQQKIFNYRLSRARRIVEN 179
LY+ L ++ P G + GD A+PL +L PF L + FN +S+ V+
Sbjct: 226 LYDSLAQHAFSPAGQEMCIYGDPAYPLHNHLQAPFRMGVLNGPMQDFNESMSQVSIQVDG 285
Query: 180 AF 181
F
Sbjct: 286 LF 287
>SB_13379| Best HMM Match : WD40 (HMM E-Value=1.3e-39)
Length = 574
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 64 DGKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRV 112
DGK V + PESG L+Y + +S + AV+ + C + G G+V
Sbjct: 239 DGKIRVFR--PESGQLFYEISDAHSKGVTAVIVNSTCSKIVSGGGEGQV 285
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 39 TFTDWKIIENGFREQWNFPGCCGAIDGKHVVIKAPPESGSLYYNYKETNSIV 90
TF WK E F C G D V E S+Y N K+ N ++
Sbjct: 4130 TFAMWKAYTEMLTEARGFKACAGTADCITAVASELMEIYSMYNNDKDVNKVI 4181
>SB_47367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 914
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 38 PTFTDWKIIENGFREQWN-FPGCCGAIDGKHVVIK---APPESGSL 79
P W++ + F E N G AIDG HV++K APP + SL
Sbjct: 719 PDVEIWEVKDVTFLESENKVLGTVAAIDGPHVIVKVANAPPNNDSL 764
>SB_16196| Best HMM Match : LRR_1 (HMM E-Value=5.7)
Length = 238
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 65 GKHVVIKAPPESGSLYYNYKETNSIVLMAVVDHKYCFSYI-DVG-CNGRVSDGGVFRNCS 122
GK +IKA +S SL + + E + I+ + H C Y +V R S G
Sbjct: 149 GKRAIIKACAKSQSLNHLFHENDPILNTCLKPHSVCLLYSREVSRIAPRSSPQGFTSPYL 208
Query: 123 LYEELENGV 131
LY++ E GV
Sbjct: 209 LYKQYEQGV 217
>SB_32585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 29.5 bits (63), Expect = 3.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 80 YYNYKETNSIVLMAVVDHKYC 100
YYNY+ T + + + + DH+YC
Sbjct: 58 YYNYRLTTTDIQLPINDHRYC 78
>SB_974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 181 FGILAARFRVFEKPMRYSPEKVVKIVKTCCALHNWLRQTKLQNRQYEYTV 230
F IL A ++ + ++ + ++ +K +KT L RQ KL R+YE T+
Sbjct: 101 FNILRAENKILRERLQNALQREMKALKTFKRLAKENRQLKLNLRKYERTL 150
>SB_40034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 56 FPGCCGAIDGKHVVIKAPPE---SGSLYYNYKETNSIVLMAVVDHKYCFSYIDVGCNGRV 112
F C ID V I P E + +YK N+ + + + S+I G GR
Sbjct: 230 FSSCSVIIDCFEVFIDRPSELLARAQTWSSYKHHNTAKFLIGITPQGTVSFISKGWGGRA 289
Query: 113 SDGGVFRNCSLYEELENGVLPEGHVLVGDNAFPLKE 148
SD + + + L LP G +++ D F +++
Sbjct: 290 SDKFITEHSGFLKNL----LP-GDLVLADRGFDIQD 320
>SB_30843| Best HMM Match : DUF592 (HMM E-Value=3.9)
Length = 159
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 181 FGILAARFRVFEKPMRYSPEKVVKIVKTCCALHNWLRQTKLQNRQYEYTV 230
F IL A ++ + ++ + ++ +K +KT L RQ KL R+YE T+
Sbjct: 101 FNILRAENKILRERLQNALQREMKALKTFKRLAKENRQLKLNLRKYERTL 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.138 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,571,951
Number of Sequences: 59808
Number of extensions: 404259
Number of successful extensions: 665
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 71
length of query: 294
length of database: 16,821,457
effective HSP length: 82
effective length of query: 212
effective length of database: 11,917,201
effective search space: 2526446612
effective search space used: 2526446612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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