GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001260-TA|BGIBMGA001260-PA|undefined
         (110 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   1.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   1.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 9   EMKERLLGAPVEVPDQKEIREV 30
           E +ERLL   +   DQK  +EV
Sbjct: 343 EFRERLLNVNLSAVDQKTRQEV 364


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 9   EMKERLLGAPVEVPDQKEIREV 30
           E +ERLL   +   DQK  +EV
Sbjct: 343 EFRERLLNVNLSAVDQKTRQEV 364


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 43   VGTIVKLNSDGYGS 56
            VGT ++L  DG GS
Sbjct: 989  VGTALQLREDGVGS 1002


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 43   VGTIVKLNSDGYGS 56
            VGT ++L  DG GS
Sbjct: 989  VGTALQLREDGVGS 1002


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 43   VGTIVKLNSDGYGS 56
            VGT ++L  DG GS
Sbjct: 989  VGTALQLREDGVGS 1002


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 43   VGTIVKLNSDGYGS 56
            VGT ++L  DG GS
Sbjct: 989  VGTALQLREDGVGS 1002


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,809
Number of Sequences: 317
Number of extensions: 707
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 110
length of database: 114,650
effective HSP length: 49
effective length of query: 61
effective length of database: 99,117
effective search space:  6046137
effective search space used:  6046137
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)